FFCP PHASE1:Mm9::chr1:168931170..168931202,+: Difference between revisions
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{{FFCP|EntrezGene=226610|HGNC=|MCL_coexpression_id=979|UniProt=Q8BQN5|association_with_transcript=-345bp_to_ENSMUST00000074640,ENSMUST00000165874,NM_001160261,NM_001160262,NM_175461,uc007dks.2,uc007dkt.2,uc011wvo.1_5end|description=CAGE_peak_1_at_Fam78b_5end|id=chr1:168931170..168931202,+|ontology_enrichment_celltype=CL:0000393!4.93e-16!39;CL:0000211!4.93e-16!39;CL:0000540!1.06e-15!33;CL:0000047!1.06e-15!33;CL:0000031!1.06e-15!33;CL:0000404!1.06e-15!33;CL:0000221!2.11e-12!44;CL:0000133!2.11e-12!44;CL:0002319!4.54e-12!43;CL:0000055!5.91e-12!50;CL:0000117!8.61e-10!23;CL:0000337!8.61e-10!23;CL:0000107!7.14e-07!9|ontology_enrichment_celltype_v019_2=CL:0000393,5.62e-18,39;CL:0000211,5.62e-18,39;CL:0000540,1.50e-17,33;CL:0000047,1.50e-17,33;CL:0000031,1.50e-17,33;CL:0000404,1.50e-17,33;CL:0000221,1.33e-14,44;CL:0000133,1.33e-14,44;CL:0002319,3.29e-14,43;CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0000107,8.64e-08,9;CL:0002321,7.45e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.81e-29!102;UBERON:0000924!1.81e-29!102;UBERON:0006601!1.81e-29!102;UBERON:0000073!2.97e-25!75;UBERON:0001016!2.97e-25!75;UBERON:0001017!6.09e-24!73;UBERON:0005743!6.09e-24!73;UBERON:0002346!2.74e-21!71;UBERON:0003075!2.74e-21!71;UBERON:0007284!2.74e-21!71;UBERON:0000033!1.09e-17!63;UBERON:0001049!2.26e-15!52;UBERON:0005068!2.26e-15!52;UBERON:0006241!2.26e-15!52;UBERON:0007135!2.26e-15!52;UBERON:0003056!2.78e-15!49;UBERON:0000955!5.85e-15!50;UBERON:0006238!5.85e-15!50;UBERON:0002616!2.52e-14!49;UBERON:0002020!1.38e-13!34;UBERON:0003080!4.49e-13!40;UBERON:0002780!1.64e-12!39;UBERON:0001890!1.64e-12!39;UBERON:0006240!1.64e-12!39;UBERON:0002791!2.67e-12!29;UBERON:0003528!2.67e-12!29;UBERON:0001893!2.67e-12!29;UBERON:0000468!1.20e-09!333;UBERON:0007811!6.28e-09!86;UBERON:0000956!9.04e-09!21;UBERON:0001869!9.04e-09!21;UBERON:0000203!9.04e-09!21;UBERON:0000010!5.24e-08!11;UBERON:0000153!9.46e-08!94;UBERON:0002619!3.87e-07!17;UBERON:0002410!7.14e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.00e-29,95;UBERON:0000924,8.00e-29,95;UBERON:0006601,8.00e-29,95;UBERON:0001016,1.16e-28,75;UBERON:0001017,3.92e-27,73;UBERON:0010314,3.63e-22,92;UBERON:0002346,8.15e-22,64;UBERON:0003075,8.15e-22,64;UBERON:0007284,8.15e-22,64;UBERON:0010371,1.61e-19,73;UBERON:0000073,2.39e-17,54;UBERON:0001049,7.13e-17,52;UBERON:0005068,7.13e-17,52;UBERON:0006241,7.13e-17,52;UBERON:0007135,7.13e-17,52;UBERON:0003056,1.54e-16,49;UBERON:0000955,1.04e-15,47;UBERON:0006238,1.04e-15,47;UBERON:0002616,5.56e-15,46;UBERON:0002020,5.70e-15,34;UBERON:0003528,5.54e-14,29;UBERON:0002791,5.54e-14,29;UBERON:0001893,5.54e-14,29;UBERON:0003080,5.96e-14,40;UBERON:0002780,2.63e-13,39;UBERON:0001890,2.63e-13,39;UBERON:0006240,2.63e-13,39;UBERON:0000956,7.42e-10,21;UBERON:0001869,7.42e-10,21;UBERON:0000203,7.42e-10,21;UBERON:0000010,4.08e-09,11;UBERON:0002619,5.96e-08,17;UBERON:0002410,8.64e-08,9;UBERON:0002021,4.37e-07,10;UBERON:0000411,4.37e-07,10;UBERON:0001950,4.37e-07,10|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0.42438965179803,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,1.5626706890476,0,0,0,0,1.25896817975577,1.62203089951223,5.87349606917381,0,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,1.80081605225163,1.14613375975503,1.54701627683233,7.68802551266472,5.81890077199236,5.70448263155561,1.69422266034566,0,2.2497492932035,2.96659908770092,2.1314403448383,2.99600110518405,1.53687322128622,5.08079100311541,2.8351247049655,3.78584930432488,0.856952953211411,3.09215957332259,6.00204916153275,4.60058260887535,8.27296907949019,2.20231761998777,3.06449611404451,3.22573719838111,5.01167893374737,5.39777097254217,8.33461392890816,4.74611098302348,1.68828783009504,2.29197371665215,2.94628585473668,3.84403538157578,6.52398060388552,5.60373830665562,9.14415877292105,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,2.95771181531029,0,2.54805239706646,0,0,0,0,0.11418387971906,0,1.48442139064825,2.60227990149204,1.52232739156071,2.07553947530453,2.71300752994721,2.3517741427141,2.76466500925286,5.43828929015623,1.15679485535929,0,3.23533699894818,2.42925670306433,3.39412677194655,0,6.44117753425404,8.58731497935166,0,0.11981512450592,0.599902730993408,0.254140454146129,7.04016005202667,8.6925114535539,11.9371634507221,6.60532416730651,7.41574826257959,4.98691306942944,6.81413304884582,1.01839363850316,3.35898820647251,0.505445516867349,5.47148825304832,1.04096354370163,2.06911893990126,1.80062129805349,1.20563854268572,2.72145996605311,2.0498195245576,5.05989312622536,9.57202471734358,1.07783996466421,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,1.64625709126355,1.79130840136644,0,0,0,0.621377317606506,0.469052119962192,0.900310307305074,1.18372367792605,0.787056926989615,0.771335564436891,1.16266972375204,1.07309360559848,1.05088808130453,1.15191894939436,1.47750717671186,2.43206428637567,2.33919979880532,0.878200461164203,2.28150911892632,3.36463917702604,6.5858951922742,0,0,0.639864751605702,0.696710015581316,1.03093969057675,0.201683524623343,0.889512175379481,1.71203063501303,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0.758671603812327,0.913988100877831,1.1270773567308,0.814605311381257,1.16371492300575,0.701358198903186,0.758838445491087,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0,0.624075346229121,0,0.179397413521912,0,2.03228509183265,0.947457058852424,0.488894929326078,0.339490171550376,0.704070744865506,0.670025029767263,0.714130922658041,0.975668239288994,1.10344600874334,0.44292937929755,0.797273843287435,2.13022309130459,2.07221978239075,3.03763023021174,0,0,0.983528546038072,0.551873492609465,5.45872005958493,5.74337264301796,0.819674726883377,1.51482556322624,7.57219726599016,8.19921363022941,7.32439552291516,5.25731355495614,10.0259403337077,12.7384438854975,4.04810701674894,12.5670018901864,11.8586333383957,9.3183181762324,2.12910127812403,2.13678724400706,0.977321756121456,0.494910368917606,0,0.242780636154981,0,0,0,0.614870295887855,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.16422815404479,2.14337035031592,1.77340233642274,1.24858172321449,0.822745103010605,0.913394847343798,2.3467170806371,3.81297727554876,0.882113592219848,0.49465875882444,1.29171541356724,0.784068024066026,0.954978752025092,1.64140899745061,0.291480836629851,7.41701208042039,0.170870880797853,1.65109494370578,0.555583582109135,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,1.10717597753397,1.01659733563424,0.972048067396211,0.627264888043406,0.436725127492355,0.944050424693745,0.661227645802687,0.523511883968059,0,0.621339313086926,0,1.19613236835183,0.827292452285488,0.583353565032143,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,1.46803082195995,0.241584120826006,0.288030006257865,0.316011120628178,1.82452693761148,0.821687657318618,1.29920822977795,0.179026695667481,0.198681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.194915761479505,0.673482891482306,0.233753804363138,1.13365191807606,0.221985953374065,0.0897138566094757,0.503653849092235,4.44336066274038,0.563047426353546,0.73260649706906,0.643105137237198,0,5.0827665835536,2.76195141904306,4.01026859407578,6.35856774671644,9.59115527678899,4.5323633843382,6.75022500231806,4.5032120322422,7.70342095273148,7.24864436452548,1.24544817101012,1.59609949360412,1.87806966329548,0.972426868273176,1.88651846365184,3.12533964365024,2.00022055021454,1.64828045791115,1.28367683836726,2.27427490587418,2.02783439912192,1.88626341386076,2.06011316433741,1.79270426733634,1.43588672389033,1.42888107384922,1.50649623728312,0.77163688185482,2.88460130562315,2.20798380201596,2.05721551431249,1.24233064311536,2.86123427936785,0.436039249896986,1.88218760830661,1.69229215783353,2.0122077016005,1.05227884575137,1.08643291076689,3.92799590160417,2.84724043498018,2.9551344712669,0.409231043169689,2.16911577660352,1.15743966588685,3.99696924700713,1.40358965067245,2.14871054048298,1.72159498861959,3.52946270591225,1.15933917810211|short_description=p1@Fam78b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226610 | |||
|HGNC= | |||
|MCL_coexpression_id=979 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BQN5 | |||
|association_with_transcript=-345bp_to_ENSMUST00000074640,ENSMUST00000165874,NM_001160261,NM_001160262,NM_175461,uc007dks.2,uc007dkt.2,uc011wvo.1_5end | |||
|cluster_id=chr1:168931170..168931202,+ | |||
|description=CAGE_peak_1_at_Fam78b_5end | |||
|id=chr1:168931170..168931202,+ | |||
|ontology_enrichment_celltype=CL:0000393!4.93e-16!39;CL:0000211!4.93e-16!39;CL:0000540!1.06e-15!33;CL:0000047!1.06e-15!33;CL:0000031!1.06e-15!33;CL:0000404!1.06e-15!33;CL:0000221!2.11e-12!44;CL:0000133!2.11e-12!44;CL:0002319!4.54e-12!43;CL:0000055!5.91e-12!50;CL:0000117!8.61e-10!23;CL:0000337!8.61e-10!23;CL:0000107!7.14e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.62e-18,39;CL:0000211,5.62e-18,39;CL:0000540,1.50e-17,33;CL:0000047,1.50e-17,33;CL:0000031,1.50e-17,33;CL:0000404,1.50e-17,33;CL:0000221,1.33e-14,44;CL:0000133,1.33e-14,44;CL:0002319,3.29e-14,43;CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0000107,8.64e-08,9;CL:0002321,7.45e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.81e-29!102;UBERON:0000924!1.81e-29!102;UBERON:0006601!1.81e-29!102;UBERON:0000073!2.97e-25!75;UBERON:0001016!2.97e-25!75;UBERON:0001017!6.09e-24!73;UBERON:0005743!6.09e-24!73;UBERON:0002346!2.74e-21!71;UBERON:0003075!2.74e-21!71;UBERON:0007284!2.74e-21!71;UBERON:0000033!1.09e-17!63;UBERON:0001049!2.26e-15!52;UBERON:0005068!2.26e-15!52;UBERON:0006241!2.26e-15!52;UBERON:0007135!2.26e-15!52;UBERON:0003056!2.78e-15!49;UBERON:0000955!5.85e-15!50;UBERON:0006238!5.85e-15!50;UBERON:0002616!2.52e-14!49;UBERON:0002020!1.38e-13!34;UBERON:0003080!4.49e-13!40;UBERON:0002780!1.64e-12!39;UBERON:0001890!1.64e-12!39;UBERON:0006240!1.64e-12!39;UBERON:0002791!2.67e-12!29;UBERON:0003528!2.67e-12!29;UBERON:0001893!2.67e-12!29;UBERON:0000468!1.20e-09!333;UBERON:0007811!6.28e-09!86;UBERON:0000956!9.04e-09!21;UBERON:0001869!9.04e-09!21;UBERON:0000203!9.04e-09!21;UBERON:0000010!5.24e-08!11;UBERON:0000153!9.46e-08!94;UBERON:0002619!3.87e-07!17;UBERON:0002410!7.14e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.00e-29,95;UBERON:0000924,8.00e-29,95;UBERON:0006601,8.00e-29,95;UBERON:0001016,1.16e-28,75;UBERON:0001017,3.92e-27,73;UBERON:0010314,3.63e-22,92;UBERON:0002346,8.15e-22,64;UBERON:0003075,8.15e-22,64;UBERON:0007284,8.15e-22,64;UBERON:0010371,1.61e-19,73;UBERON:0000073,2.39e-17,54;UBERON:0001049,7.13e-17,52;UBERON:0005068,7.13e-17,52;UBERON:0006241,7.13e-17,52;UBERON:0007135,7.13e-17,52;UBERON:0003056,1.54e-16,49;UBERON:0000955,1.04e-15,47;UBERON:0006238,1.04e-15,47;UBERON:0002616,5.56e-15,46;UBERON:0002020,5.70e-15,34;UBERON:0003528,5.54e-14,29;UBERON:0002791,5.54e-14,29;UBERON:0001893,5.54e-14,29;UBERON:0003080,5.96e-14,40;UBERON:0002780,2.63e-13,39;UBERON:0001890,2.63e-13,39;UBERON:0006240,2.63e-13,39;UBERON:0000956,7.42e-10,21;UBERON:0001869,7.42e-10,21;UBERON:0000203,7.42e-10,21;UBERON:0000010,4.08e-09,11;UBERON:0002619,5.96e-08,17;UBERON:0002410,8.64e-08,9;UBERON:0002021,4.37e-07,10;UBERON:0000411,4.37e-07,10;UBERON:0001950,4.37e-07,10 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0.42438965179803,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,1.5626706890476,0,0,0,0,1.25896817975577,1.62203089951223,5.87349606917381,0,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,1.80081605225163,1.14613375975503,1.54701627683233,7.68802551266472,5.81890077199236,5.70448263155561,1.69422266034566,0,2.2497492932035,2.96659908770092,2.1314403448383,2.99600110518405,1.53687322128622,5.08079100311541,2.8351247049655,3.78584930432488,0.856952953211411,3.09215957332259,6.00204916153275,4.60058260887535,8.27296907949019,2.20231761998777,3.06449611404451,3.22573719838111,5.01167893374737,5.39777097254217,8.33461392890816,4.74611098302348,1.68828783009504,2.29197371665215,2.94628585473668,3.84403538157578,6.52398060388552,5.60373830665562,9.14415877292105,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,2.95771181531029,0,2.54805239706646,0,0,0,0,0.11418387971906,0,1.48442139064825,2.60227990149204,1.52232739156071,2.07553947530453,2.71300752994721,2.3517741427141,2.76466500925286,5.43828929015623,1.15679485535929,0,3.23533699894818,2.42925670306433,3.39412677194655,0,6.44117753425404,8.58731497935166,0,0.11981512450592,0.599902730993408,0.254140454146129,7.04016005202667,8.6925114535539,11.9371634507221,6.60532416730651,7.41574826257959,4.98691306942944,6.81413304884582,1.01839363850316,3.35898820647251,0.505445516867349,5.47148825304832,1.04096354370163,2.06911893990126,1.80062129805349,1.20563854268572,2.72145996605311,2.0498195245576,5.05989312622536,9.57202471734358,1.07783996466421,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,1.64625709126355,1.79130840136644,0,0,0,0.621377317606506,0.469052119962192,0.900310307305074,1.18372367792605,0.787056926989615,0.771335564436891,1.16266972375204,1.07309360559848,1.05088808130453,1.15191894939436,1.47750717671186,2.43206428637567,2.33919979880532,0.878200461164203,2.28150911892632,3.36463917702604,6.5858951922742,0,0,0.639864751605702,0.696710015581316,1.03093969057675,0.201683524623343,0.889512175379481,1.71203063501303,0.474529061544512,0.823494773620054,0.502670417600539,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0.758671603812327,0.913988100877831,1.1270773567308,0.814605311381257,1.16371492300575,0.701358198903186,0.758838445491087,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0,0.624075346229121,0,0.179397413521912,0,2.03228509183265,0.947457058852424,0.488894929326078,0.339490171550376,0.704070744865506,0.670025029767263,0.714130922658041,0.975668239288994,1.10344600874334,0.44292937929755,0.797273843287435,2.13022309130459,2.07221978239075,3.03763023021174,0,0,0.983528546038072,0.551873492609465,5.45872005958493,5.74337264301796,0.819674726883377,1.51482556322624,7.57219726599016,8.19921363022941,7.32439552291516,5.25731355495614,10.0259403337077,12.7384438854975,4.04810701674894,12.5670018901864,11.8586333383957,9.3183181762324,2.12910127812403,2.13678724400706,0.977321756121456,0.494910368917606,0,0.242780636154981,0,0,0,0.614870295887855,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.16422815404479,2.14337035031592,1.77340233642274,1.24858172321449,0.822745103010605,0.913394847343798,2.3467170806371,3.81297727554876,0.882113592219848,0.49465875882444,1.29171541356724,0.784068024066026,0.954978752025092,1.64140899745061,0.291480836629851,7.41701208042039,0.170870880797853,1.65109494370578,0.555583582109135,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,1.10717597753397,1.01659733563424,0.972048067396211,0.627264888043406,0.436725127492355,0.944050424693745,0.661227645802687,0.523511883968059,0,0.621339313086926,0,1.19613236835183,0.827292452285488,0.583353565032143,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,1.46803082195995,0.241584120826006,0.288030006257865,0.316011120628178,1.82452693761148,0.821687657318618,1.29920822977795,0.179026695667481,0.198681354781265,0.721172697119813,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.194915761479505,0.673482891482306,0.233753804363138,1.13365191807606,0.221985953374065,0.0897138566094757,0.503653849092235,4.44336066274038,0.563047426353546,0.73260649706906,0.643105137237198,0,5.0827665835536,2.76195141904306,4.01026859407578,6.35856774671644,9.59115527678899,4.5323633843382,6.75022500231806,4.5032120322422,7.70342095273148,7.24864436452548,1.24544817101012,1.59609949360412,1.87806966329548,0.972426868273176,1.88651846365184,3.12533964365024,2.00022055021454,1.64828045791115,1.28367683836726,2.27427490587418,2.02783439912192,1.88626341386076,2.06011316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| |||
|short_description=p1@Fam78b | |||
}} |
Latest revision as of 17:42, 26 September 2015
Short description: | p1@Fam78b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam78b_5end |
Coexpression cluster: | MCL_coexpression_mm9:979 |
Association with transcript: | -345bp_to_ENSMUST00000074640, ENSMUST00000165874, NM_001160261, NM_001160262, NM_175461, uc007dks.2, uc007dkt.2, uc011wvo.1_5end |
EntrezGene: | Fam78b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.62e-18 | 39 |
electrically active cell | 5.62e-18 | 39 |
neuron | 1.50e-17 | 33 |
neuronal stem cell | 1.50e-17 | 33 |
neuroblast | 1.50e-17 | 33 |
electrically signaling cell | 1.50e-17 | 33 |
ectodermal cell | 1.33e-14 | 44 |
neurectodermal cell | 1.33e-14 | 44 |
neural cell | 3.29e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.11e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-10 | 23 |
autonomic neuron | 8.64e-08 | 9 |
embryonic cell | 7.45e-07 | 70 |