FFCP PHASE1:Mm9::chr1:134439511..134439531,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21367|HGNC=|MCL_coexpression_id=2283|UniProt=Q61330,Q3UGZ2|association_with_transcript=0bp_to_ENSMUST00000086521,ENSMUST00000086522,NM_177129,uc007cpa.1,uc007cpb.1_5end|description=CAGE_peak_3_at_Cntn2_5end|id=chr1:134439511..134439531,-|ontology_enrichment_celltype=CL:0000117!1.32e-20!23;CL:0000337!1.32e-20!23;CL:0000540!7.15e-14!33;CL:0000047!7.15e-14!33;CL:0000031!7.15e-14!33;CL:0000404!7.15e-14!33;CL:0000393!1.26e-12!39;CL:0000211!1.26e-12!39;CL:0000221!1.40e-10!44;CL:0000133!1.40e-10!44;CL:0002319!1.99e-10!43;CL:0000055!2.00e-09!50;CL:0002609!3.57e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-26,23;CL:0000337,4.72e-26,23;CL:0000540,1.45e-15,33;CL:0000047,1.45e-15,33;CL:0000031,1.45e-15,33;CL:0000404,1.45e-15,33;CL:0000393,5.50e-13,39;CL:0000211,5.50e-13,39;CL:0002319,4.13e-10,43;CL:0000221,1.04e-09,44;CL:0000133,1.04e-09,44;CL:0002609,8.83e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.96e-26!75;UBERON:0001016!4.96e-26!75;UBERON:0000033!5.08e-26!63;UBERON:0001049!1.01e-25!52;UBERON:0005068!1.01e-25!52;UBERON:0006241!1.01e-25!52;UBERON:0007135!1.01e-25!52;UBERON:0001017!2.26e-25!73;UBERON:0005743!2.26e-25!73;UBERON:0000955!2.09e-24!50;UBERON:0006238!2.09e-24!50;UBERON:0002616!9.61e-24!49;UBERON:0002346!2.72e-23!71;UBERON:0003075!2.72e-23!71;UBERON:0007284!2.72e-23!71;UBERON:0003056!5.31e-22!49;UBERON:0004121!7.38e-22!102;UBERON:0000924!7.38e-22!102;UBERON:0006601!7.38e-22!102;UBERON:0003080!2.40e-19!40;UBERON:0002780!1.40e-18!39;UBERON:0001890!1.40e-18!39;UBERON:0006240!1.40e-18!39;UBERON:0002020!1.58e-18!34;UBERON:0002791!4.49e-15!29;UBERON:0003528!4.49e-15!29;UBERON:0001893!4.49e-15!29;UBERON:0007811!2.04e-14!86;UBERON:0000153!1.24e-11!94;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0000025!1.32e-07!114;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8;UBERON:0004111!3.88e-07!122;UBERON:0003076!6.45e-07!12;UBERON:0003057!6.45e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-31,54;UBERON:0001049,6.23e-29,52;UBERON:0005068,6.23e-29,52;UBERON:0006241,6.23e-29,52;UBERON:0007135,6.23e-29,52;UBERON:0001017,1.03e-26,73;UBERON:0002346,1.62e-26,64;UBERON:0003075,1.62e-26,64;UBERON:0007284,1.62e-26,64;UBERON:0001016,1.43e-25,75;UBERON:0000955,4.54e-24,47;UBERON:0006238,4.54e-24,47;UBERON:0002616,2.89e-23,46;UBERON:0002020,8.53e-23,34;UBERON:0010371,2.15e-21,73;UBERON:0004121,3.50e-21,95;UBERON:0000924,3.50e-21,95;UBERON:0006601,3.50e-21,95;UBERON:0003080,1.43e-20,40;UBERON:0003056,3.05e-20,49;UBERON:0002780,1.25e-19,39;UBERON:0001890,1.25e-19,39;UBERON:0006240,1.25e-19,39;UBERON:0003528,2.24e-18,29;UBERON:0002791,2.24e-18,29;UBERON:0001893,2.24e-18,29;UBERON:0010314,1.26e-16,92;UBERON:0000956,5.77e-11,21;UBERON:0001869,5.77e-11,21;UBERON:0000203,5.77e-11,21;UBERON:0002420,3.89e-09,8;UBERON:0007245,3.89e-09,8;UBERON:0010009,3.89e-09,8;UBERON:0010011,3.89e-09,8;UBERON:0000454,3.89e-09,8;UBERON:0003076,8.39e-09,12;UBERON:0003057,8.39e-09,12;UBERON:0000025,6.81e-08,114;UBERON:0002619,3.74e-07,17;UBERON:0002240,8.07e-07,6;UBERON:0005174,8.07e-07,6;UBERON:0001137,8.07e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.54701627683233,28.1219880594841,26.4495489636016,19.6487735086916,0,0,0,0,0,0.299600110518405,0,65.3244557543409,56.0274644076516,63.0974884054146,4.57041575046086,3.3130281142742,17.6386750869534,20.1275489138296,22.9804696652505,9.91042928994498,10.5980490610706,11.8277030607307,7.12185953743047,8.14240028061446,7.29278718779464,13.6799669510677,5.06486349028512,11.7654650788144,3.24091444021034,2.13557521198654,8.38797506213853,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,11.7112318804619,21.5730108017859,0,0,0,0,6.74057877321702,3.20250421973039,3.39266750704734,2.78118912307642,3.83573185995496,6.44142938134636,10.707923362472,0,0,0,0,1.17108398666433,5.74755261083682,7.38254732201932,4.37043971723574,0.272145996605311,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.583826711835847,0,0.492502392237286,0.648550476366846,2.04679982395465,1.75640092232841,0.268412837520744,2.52347938276953,22.0215870491669,0,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,11.8383803458125,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44048875225048,0.776152102696527,0.643011105094777,0.177340233642274,1.60531935841864,2.30368628842969,2.13125464380219,0,0,0.441056796109924,0,0.161464426695906,0,0,0,0,13.9068976507882,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,1.54667864109319,2.74033007908257,0,4.05013500139084,3.15224842256954,3.17199686288943,2.07104124700728,2.17953429926771,4.78829848081237,7.17081144167364,1.70174701947806,1.88651846365184,1.2869045591501,0.44449345560323,1.44224540067226,1.28367683836726,1.76888048234658,0.50695859978048,1.69763707247469,0.842773567228942,1.60062881012173,1.60819313075717,3.81034953026459,1.39061191133827,1.73618298417335,0.824171801606613,1.47198920134397,0.342869252385415,1.06485483695602,1.90748951957857,1.30811774969096,1.2234219453993,1.26921911837515,1.28049581010941,2.63069711437843,1.62964936615034,1.68342681497322,1.89816028998679,1.87158516513571,2.04615521584845,1.54936841185966,1.54325288784913,5.74564329257276,1.16965804222704,1.07435527024149,0.382576664137687,0.441182838239031,0|short_description=p3@Cntn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21367 | |||
|HGNC= | |||
|MCL_coexpression_id=2283 | |||
|TSSclassifier=NA | |||
|UniProt=Q61330,Q3UGZ2 | |||
|association_with_transcript=0bp_to_ENSMUST00000086521,ENSMUST00000086522,NM_177129,uc007cpa.1,uc007cpb.1_5end | |||
|cluster_id=chr1:134439511..134439531,- | |||
|description=CAGE_peak_3_at_Cntn2_5end | |||
|id=chr1:134439511..134439531,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-20!23;CL:0000337!1.32e-20!23;CL:0000540!7.15e-14!33;CL:0000047!7.15e-14!33;CL:0000031!7.15e-14!33;CL:0000404!7.15e-14!33;CL:0000393!1.26e-12!39;CL:0000211!1.26e-12!39;CL:0000221!1.40e-10!44;CL:0000133!1.40e-10!44;CL:0002319!1.99e-10!43;CL:0000055!2.00e-09!50;CL:0002609!3.57e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-26,23;CL:0000337,4.72e-26,23;CL:0000540,1.45e-15,33;CL:0000047,1.45e-15,33;CL:0000031,1.45e-15,33;CL:0000404,1.45e-15,33;CL:0000393,5.50e-13,39;CL:0000211,5.50e-13,39;CL:0002319,4.13e-10,43;CL:0000221,1.04e-09,44;CL:0000133,1.04e-09,44;CL:0002609,8.83e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.96e-26!75;UBERON:0001016!4.96e-26!75;UBERON:0000033!5.08e-26!63;UBERON:0001049!1.01e-25!52;UBERON:0005068!1.01e-25!52;UBERON:0006241!1.01e-25!52;UBERON:0007135!1.01e-25!52;UBERON:0001017!2.26e-25!73;UBERON:0005743!2.26e-25!73;UBERON:0000955!2.09e-24!50;UBERON:0006238!2.09e-24!50;UBERON:0002616!9.61e-24!49;UBERON:0002346!2.72e-23!71;UBERON:0003075!2.72e-23!71;UBERON:0007284!2.72e-23!71;UBERON:0003056!5.31e-22!49;UBERON:0004121!7.38e-22!102;UBERON:0000924!7.38e-22!102;UBERON:0006601!7.38e-22!102;UBERON:0003080!2.40e-19!40;UBERON:0002780!1.40e-18!39;UBERON:0001890!1.40e-18!39;UBERON:0006240!1.40e-18!39;UBERON:0002020!1.58e-18!34;UBERON:0002791!4.49e-15!29;UBERON:0003528!4.49e-15!29;UBERON:0001893!4.49e-15!29;UBERON:0007811!2.04e-14!86;UBERON:0000153!1.24e-11!94;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0000025!1.32e-07!114;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8;UBERON:0004111!3.88e-07!122;UBERON:0003076!6.45e-07!12;UBERON:0003057!6.45e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-31,54;UBERON:0001049,6.23e-29,52;UBERON:0005068,6.23e-29,52;UBERON:0006241,6.23e-29,52;UBERON:0007135,6.23e-29,52;UBERON:0001017,1.03e-26,73;UBERON:0002346,1.62e-26,64;UBERON:0003075,1.62e-26,64;UBERON:0007284,1.62e-26,64;UBERON:0001016,1.43e-25,75;UBERON:0000955,4.54e-24,47;UBERON:0006238,4.54e-24,47;UBERON:0002616,2.89e-23,46;UBERON:0002020,8.53e-23,34;UBERON:0010371,2.15e-21,73;UBERON:0004121,3.50e-21,95;UBERON:0000924,3.50e-21,95;UBERON:0006601,3.50e-21,95;UBERON:0003080,1.43e-20,40;UBERON:0003056,3.05e-20,49;UBERON:0002780,1.25e-19,39;UBERON:0001890,1.25e-19,39;UBERON:0006240,1.25e-19,39;UBERON:0003528,2.24e-18,29;UBERON:0002791,2.24e-18,29;UBERON:0001893,2.24e-18,29;UBERON:0010314,1.26e-16,92;UBERON:0000956,5.77e-11,21;UBERON:0001869,5.77e-11,21;UBERON:0000203,5.77e-11,21;UBERON:0002420,3.89e-09,8;UBERON:0007245,3.89e-09,8;UBERON:0010009,3.89e-09,8;UBERON:0010011,3.89e-09,8;UBERON:0000454,3.89e-09,8;UBERON:0003076,8.39e-09,12;UBERON:0003057,8.39e-09,12;UBERON:0000025,6.81e-08,114;UBERON:0002619,3.74e-07,17;UBERON:0002240,8.07e-07,6;UBERON:0005174,8.07e-07,6;UBERON:0001137,8.07e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.54701627683233,28.1219880594841,26.4495489636016,19.6487735086916,0,0,0,0,0,0.299600110518405,0,65.3244557543409,56.0274644076516,63.0974884054146,4.57041575046086,3.3130281142742,17.6386750869534,20.1275489138296,22.9804696652505,9.91042928994498,10.5980490610706,11.8277030607307,7.12185953743047,8.14240028061446,7.29278718779464,13.6799669510677,5.06486349028512,11.7654650788144,3.24091444021034,2.13557521198654,8.38797506213853,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,11.7112318804619,21.5730108017859,0,0,0,0,6.74057877321702,3.20250421973039,3.39266750704734,2.78118912307642,3.83573185995496,6.44142938134636,10.707923362472,0,0,0,0,1.17108398666433,5.74755261083682,7.38254732201932,4.37043971723574,0.272145996605311,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.583826711835847,0,0.492502392237286,0.648550476366846,2.04679982395465,1.75640092232841,0.268412837520744,2.52347938276953,22.0215870491669,0,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,11.8383803458125,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44048875225048,0.776152102696527,0.643011105094777,0.177340233642274,1.60531935841864,2.30368628842969,2.13125464380219,0,0,0.441056796109924,0,0.161464426695906,0,0,0,0,13.9068976507882,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,1.54667864109319,2.74033007908257,0,4.05013500139084,3.15224842256954,3.17199686288943,2.07104124700728,2.17953429926771,4.78829848081237,7.17081144167364,1.70174701947806,1.88651846365184,1.2869045591501,0.44449345560323,1.44224540067226,1.28367683836726,1.76888048234658,0.50695859978048,1.69763707247469,0.842773567228942,1.60062881012173,1.60819313075717,3.81034953026459,1.39061191133827,1.73618298417335,0.824171801606613,1.47198920134397,0.342869252385415,1.06485483695602,1.90748951957857,1.30811774969096,1.2234219453993,1.26921911837515,1.28049581010941,2.63069711437843,1.62964936615034,1.68342681497322,1.89816028998679,1.87158516513571,2.04615521584845,1.54936841185966,1.54325288784913,5.74564329257276,1.16965804222704,1.07435527024149,0.382576664137687,0.441182838239031,0 | |||
|short_description=p3@Cntn2 | |||
}} |
Latest revision as of 09:10, 26 September 2015
Short description: | p3@Cntn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cntn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2283 |
Association with transcript: | 0bp_to_ENSMUST00000086521, ENSMUST00000086522, NM_177129, uc007cpa.1, uc007cpb.1_5end |
EntrezGene: | Cntn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.72e-26 | 23 |
neuroblast (sensu Vertebrata) | 4.72e-26 | 23 |
neuron | 1.45e-15 | 33 |
neuronal stem cell | 1.45e-15 | 33 |
neuroblast | 1.45e-15 | 33 |
electrically signaling cell | 1.45e-15 | 33 |
electrically responsive cell | 5.50e-13 | 39 |
electrically active cell | 5.50e-13 | 39 |
neural cell | 4.13e-10 | 43 |
ectodermal cell | 1.04e-09 | 44 |
neurectodermal cell | 1.04e-09 | 44 |
neuron of cerebral cortex | 8.83e-09 | 6 |