FFCP PHASE1:Mm9::chr1:128389260..128389301,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=210356|HGNC=|MCL_coexpression_id=32|UniProt=Q8C6S8|association_with_transcript=17bp_to_ENSMUST00000162877_5end|description=CAGE_peak_6_at_Nckap5_5end|id=chr1:128389260..128389301,-|ontology_enrichment_celltype=CL:0000117!8.70e-13!23;CL:0000337!8.70e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-15,23;CL:0000337,1.30e-15,23;CL:0000540,1.81e-09,33;CL:0000047,1.81e-09,33;CL:0000031,1.81e-09,33;CL:0000404,1.81e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.13e-11!71;UBERON:0003075!2.13e-11!71;UBERON:0007284!2.13e-11!71;UBERON:0002048!6.01e-11!14;UBERON:0000117!6.01e-11!14;UBERON:0000171!6.01e-11!14;UBERON:0000170!6.01e-11!14;UBERON:0005597!6.01e-11!14;UBERON:0000118!6.01e-11!14;UBERON:0000033!1.43e-10!63;UBERON:0000025!5.90e-10!114;UBERON:0003056!1.38e-09!49;UBERON:0001049!1.73e-09!52;UBERON:0005068!1.73e-09!52;UBERON:0006241!1.73e-09!52;UBERON:0007135!1.73e-09!52;UBERON:0004111!4.80e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!8.33e-09!49;UBERON:0002020!1.05e-08!34;UBERON:0004121!2.25e-08!102;UBERON:0000924!2.25e-08!102;UBERON:0006601!2.25e-08!102;UBERON:0005153!9.99e-08!17;UBERON:0005178!9.99e-08!17;UBERON:0005181!9.99e-08!17;UBERON:0002224!9.99e-08!17;UBERON:0000915!9.99e-08!17;UBERON:0008947!9.99e-08!17;UBERON:0003258!9.99e-08!17;UBERON:0003080!1.80e-07!40;UBERON:0001017!3.53e-07!73;UBERON:0005743!3.53e-07!73;UBERON:0002780!4.47e-07!39;UBERON:0001890!4.47e-07!39;UBERON:0006240!4.47e-07!39;UBERON:0002791!7.09e-07!29;UBERON:0003528!7.09e-07!29;UBERON:0001893!7.09e-07!29;UBERON:0000073!7.75e-07!75;UBERON:0001016!7.75e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.77e-20,14;UBERON:0000117,5.77e-20,14;UBERON:0000171,5.77e-20,14;UBERON:0000170,5.77e-20,14;UBERON:0005597,5.77e-20,14;UBERON:0000118,5.77e-20,14;UBERON:0005153,9.94e-16,17;UBERON:0005178,9.94e-16,17;UBERON:0005181,9.94e-16,17;UBERON:0002224,9.94e-16,17;UBERON:0000915,9.94e-16,17;UBERON:0008947,9.94e-16,17;UBERON:0003258,9.94e-16,17;UBERON:0005157,8.87e-13,20;UBERON:0000025,1.79e-08,114;UBERON:0002020,8.54e-08,34;UBERON:0000310,2.03e-07,6;UBERON:0001443,2.03e-07,6;UBERON:0004111,2.52e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,0.420649922702764,0.571301968807607,0.441737081903227,1.5923803897944,2.68367318851062,2.75765635983006,3.30347642998166,1.65993539510744,1.53606533256243,2.1101806036831,2.37867873366265,2.6045668527838,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,1.38233250462643,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,1.29710095273369,2.92399974850665,3.07370161407471,1.61047702512446,0.841159794256509,2.98423375899925,0,0,0,0,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0.863088412352432,0.162135226775035,0,0,0,0,0.252578877947112,0,0,12.3784637411625,0.189491411770485,2.77040459951444,2.8856664581782,4.45911471748154,5.86271901046355,4.28478553594825,4.29294025287157,11.1920952315396,8.858587585951,14.8292934851463,13.9283817508377,12.4333186943445,13.7416605652436,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0.335769232728157,0.386379188064381,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,0.45032120322422,0,0.51776031175182,0.207574695168353,1.19707462020309,0.853668028770671,0.486213434136588,0,0.735374033800057,1.33348036680969,0.618105171716683,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,1.27472758539341,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.31753132581463,0.761531471025089,0,1.8414879800649,1.08643291076689,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,1.07435527024149,0,0,0|short_description=p6@Nckap5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210356 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C6S8 | |||
|association_with_transcript=17bp_to_ENSMUST00000162877_5end | |||
|cluster_id=chr1:128389260..128389301,- | |||
|description=CAGE_peak_6_at_Nckap5_5end | |||
|id=chr1:128389260..128389301,- | |||
|ontology_enrichment_celltype=CL:0000117!8.70e-13!23;CL:0000337!8.70e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-15,23;CL:0000337,1.30e-15,23;CL:0000540,1.81e-09,33;CL:0000047,1.81e-09,33;CL:0000031,1.81e-09,33;CL:0000404,1.81e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.13e-11!71;UBERON:0003075!2.13e-11!71;UBERON:0007284!2.13e-11!71;UBERON:0002048!6.01e-11!14;UBERON:0000117!6.01e-11!14;UBERON:0000171!6.01e-11!14;UBERON:0000170!6.01e-11!14;UBERON:0005597!6.01e-11!14;UBERON:0000118!6.01e-11!14;UBERON:0000033!1.43e-10!63;UBERON:0000025!5.90e-10!114;UBERON:0003056!1.38e-09!49;UBERON:0001049!1.73e-09!52;UBERON:0005068!1.73e-09!52;UBERON:0006241!1.73e-09!52;UBERON:0007135!1.73e-09!52;UBERON:0004111!4.80e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!8.33e-09!49;UBERON:0002020!1.05e-08!34;UBERON:0004121!2.25e-08!102;UBERON:0000924!2.25e-08!102;UBERON:0006601!2.25e-08!102;UBERON:0005153!9.99e-08!17;UBERON:0005178!9.99e-08!17;UBERON:0005181!9.99e-08!17;UBERON:0002224!9.99e-08!17;UBERON:0000915!9.99e-08!17;UBERON:0008947!9.99e-08!17;UBERON:0003258!9.99e-08!17;UBERON:0003080!1.80e-07!40;UBERON:0001017!3.53e-07!73;UBERON:0005743!3.53e-07!73;UBERON:0002780!4.47e-07!39;UBERON:0001890!4.47e-07!39;UBERON:0006240!4.47e-07!39;UBERON:0002791!7.09e-07!29;UBERON:0003528!7.09e-07!29;UBERON:0001893!7.09e-07!29;UBERON:0000073!7.75e-07!75;UBERON:0001016!7.75e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.77e-20,14;UBERON:0000117,5.77e-20,14;UBERON:0000171,5.77e-20,14;UBERON:0000170,5.77e-20,14;UBERON:0005597,5.77e-20,14;UBERON:0000118,5.77e-20,14;UBERON:0005153,9.94e-16,17;UBERON:0005178,9.94e-16,17;UBERON:0005181,9.94e-16,17;UBERON:0002224,9.94e-16,17;UBERON:0000915,9.94e-16,17;UBERON:0008947,9.94e-16,17;UBERON:0003258,9.94e-16,17;UBERON:0005157,8.87e-13,20;UBERON:0000025,1.79e-08,114;UBERON:0002020,8.54e-08,34;UBERON:0000310,2.03e-07,6;UBERON:0001443,2.03e-07,6;UBERON:0004111,2.52e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,0.420649922702764,0.571301968807607,0.441737081903227,1.5923803897944,2.68367318851062,2.75765635983006,3.30347642998166,1.65993539510744,1.53606533256243,2.1101806036831,2.37867873366265,2.6045668527838,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,1.28134512719193,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,0,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,1.38233250462643,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,1.05493372485001,0.680364991513279,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0.756424320671277,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.36012412292203,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,1.29710095273369,2.92399974850665,3.07370161407471,1.61047702512446,0.841159794256509,2.98423375899925,0,0,0,0,0.38660238396628,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0.863088412352432,0.162135226775035,0,0,0,0,0.252578877947112,0,0,12.3784637411625,0.189491411770485,2.77040459951444,2.8856664581782,4.45911471748154,5.86271901046355,4.28478553594825,4.29294025287157,11.1920952315396,8.858587585951,14.8292934851463,13.9283817508377,12.4333186943445,13.7416605652436,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.129358683782755,0.428674070063185,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0.335769232728157,0.386379188064381,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,2.2661816921691,0,0.45032120322422,0,0.51776031175182,0.207574695168353,1.19707462020309,0.853668028770671,0.486213434136588,0,0.735374033800057,1.33348036680969,0.618105171716683,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,1.27472758539341,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.31753132581463,0.761531471025089,0,1.8414879800649,1.08643291076689,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,1.15743966588685,0,0.701794825336225,1.07435527024149,0,0,0 | |||
|short_description=p6@Nckap5 | |||
}} |
Latest revision as of 07:10, 26 September 2015
Short description: | p6@Nckap5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nckap5_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 17bp_to_ENSMUST00000162877_5end |
EntrezGene: | Nckap5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-15 | 23 |
neuron | 1.81e-09 | 33 |
neuronal stem cell | 1.81e-09 | 33 |
neuroblast | 1.81e-09 | 33 |
electrically signaling cell | 1.81e-09 | 33 |
electrically responsive cell | 2.44e-07 | 39 |
electrically active cell | 2.44e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
lung | 5.77e-20 | 14 |
respiratory tube | 5.77e-20 | 14 |
respiration organ | 5.77e-20 | 14 |
pair of lungs | 5.77e-20 | 14 |
lung primordium | 5.77e-20 | 14 |
lung bud | 5.77e-20 | 14 |
epithelial bud | 9.94e-16 | 17 |
thoracic cavity element | 9.94e-16 | 17 |
thoracic segment organ | 9.94e-16 | 17 |
thoracic cavity | 9.94e-16 | 17 |
thoracic segment of trunk | 9.94e-16 | 17 |
respiratory primordium | 9.94e-16 | 17 |
endoderm of foregut | 9.94e-16 | 17 |
epithelial fold | 8.87e-13 | 20 |
tube | 1.79e-08 | 114 |
gray matter | 8.54e-08 | 34 |
breast | 2.03e-07 | 6 |
chest | 2.03e-07 | 6 |
anatomical conduit | 2.52e-07 | 122 |