FFCP PHASE1:Mm9::chr1:108068227..108068306,+: Difference between revisions
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{{FFCP|EntrezGene=98432|HGNC=|UniProt=Q8CHE4|association_with_transcript=-22bp_to_ENSMUST00000061047,ENSMUST00000135810_5end|description=CAGE_peak_2_at_Phlpp1_5end|id=chr1:108068227..108068306,+|ontology_enrichment_celltype=CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0000540!1.72e-08!33;CL:0000047!1.72e-08!33;CL:0000031!1.72e-08!33;CL:0000404!1.72e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000540,1.65e-08,33;CL:0000047,1.65e-08,33;CL:0000031,1.65e-08,33;CL:0000404,1.65e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.45e-19!63;UBERON:0001017!3.19e-18!73;UBERON:0005743!3.19e-18!73;UBERON:0003056!1.09e-17!49;UBERON:0001049!2.66e-17!52;UBERON:0005068!2.66e-17!52;UBERON:0006241!2.66e-17!52;UBERON:0007135!2.66e-17!52;UBERON:0000955!3.01e-17!50;UBERON:0006238!3.01e-17!50;UBERON:0000073!3.17e-17!75;UBERON:0001016!3.17e-17!75;UBERON:0002616!5.32e-17!49;UBERON:0004121!4.59e-16!102;UBERON:0000924!4.59e-16!102;UBERON:0006601!4.59e-16!102;UBERON:0002020!9.29e-16!34;UBERON:0003080!1.94e-15!40;UBERON:0007811!2.26e-15!86;UBERON:0002346!2.43e-15!71;UBERON:0003075!2.43e-15!71;UBERON:0007284!2.43e-15!71;UBERON:0002780!5.25e-15!39;UBERON:0001890!5.25e-15!39;UBERON:0006240!5.25e-15!39;UBERON:0002791!6.63e-14!29;UBERON:0003528!6.63e-14!29;UBERON:0001893!6.63e-14!29;UBERON:0000153!3.79e-12!94;UBERON:0000956!5.10e-11!21;UBERON:0001869!5.10e-11!21;UBERON:0000203!5.10e-11!21;UBERON:0002619!2.45e-09!17;UBERON:0002021!3.15e-07!10;UBERON:0000411!3.15e-07!10;UBERON:0001950!3.15e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-19,54;UBERON:0004121,6.84e-19,95;UBERON:0000924,6.84e-19,95;UBERON:0006601,6.84e-19,95;UBERON:0002346,8.19e-19,64;UBERON:0003075,8.19e-19,64;UBERON:0007284,8.19e-19,64;UBERON:0010371,1.74e-18,73;UBERON:0001017,2.52e-18,73;UBERON:0003056,9.95e-18,49;UBERON:0001016,2.53e-17,75;UBERON:0001049,2.67e-17,52;UBERON:0005068,2.67e-17,52;UBERON:0006241,2.67e-17,52;UBERON:0007135,2.67e-17,52;UBERON:0002020,8.57e-16,34;UBERON:0000955,1.69e-15,47;UBERON:0006238,1.69e-15,47;UBERON:0003080,1.79e-15,40;UBERON:0002616,2.96e-15,46;UBERON:0002780,4.87e-15,39;UBERON:0001890,4.87e-15,39;UBERON:0006240,4.87e-15,39;UBERON:0003528,6.18e-14,29;UBERON:0002791,6.18e-14,29;UBERON:0001893,6.18e-14,29;UBERON:0010314,1.53e-11,92;UBERON:0000956,4.83e-11,21;UBERON:0001869,4.83e-11,21;UBERON:0000203,4.83e-11,21;UBERON:0002619,2.34e-09,17;UBERON:0002021,3.05e-07,10;UBERON:0000411,3.05e-07,10;UBERON:0001950,3.05e-07,10|phase1_expression=4.00372117761985,2.44282785347553,3.18499467572675,5.44435580352294,3.00537437967808,2.51818907867835,1.16806320297763,9.68424925811822,3.37892933164,4.21316147379588,1.02730780935303,0.957265907944037,6.50562773738582,6.6439505838438,2.6648780945253,2.22722794128809,6.29605690315332,7.41336088591859,8.91243818437302,9.33657233955666,4.93251082876205,1.78723712161594,2.35079810225042,0.47997726838022,0.91763712426868,1.14846392823004,1.7230479846363,1.07735616342945,1.71021077510736,1.76421090831952,0.886922042621219,0,0,0,1.73310971850765,1.16364251750945,2.85837098767317,1.67412652294763,0.7813353445238,0,1.17646297606203,2.04913645487534,1.45653105909346,0.629484089877886,0.506884656097573,1.10128051297009,0.782391344348039,1.74420125104357,2.41654801007919,2.91644848611425,1.95980990275508,0,18.1205214542355,6.5282592781021,4.36921938885203,0.257259436035947,0.573066879877513,1.54701627683233,7.08107613008592,6.34789175126439,6.97214543856797,1.69422266034566,0,1.7997994345628,1.97773272513395,2.8419204597844,3.29560121570245,2.30530983192933,4.66603255388149,5.40023753326763,6.09942387919008,2.57085885963423,5.30084498283872,6.73699395682247,6.99671938433125,5.51531271966013,13.2139057199266,6.2566795661742,7.0659005297872,4.48413378282659,6.12967212136145,2.08365348222704,5.02529398202486,6.75315132038016,4.5839474333043,6.48182888042069,5.97961059356232,6.71038004971082,1.4387976733305,1.5870027622425,4.05810284182349,2.58127163094416,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,2.24711072210803,2.21559419351475,1.29893002301434,1.06001872353102,4.92951969218382,1.28326477414318,0,0,1.73192832808971,2.02687892380079,2.02209778005913,1.1418387971906,0.517875767294343,2.82040064223167,1.56136794089522,1.82679286987285,0.922461989024234,1.20578112442098,0.823120949949934,1.63366568728578,1.97755974187499,0.433798070759735,1.76922110389975,1.13236794963186,1.54589062922275,0.969750506270444,3.72783522436244,2.92780797011547,7.95897485891129,0.766371165625774,5.75112597628417,2.99951365496704,3.93917703926501,5.39246301857362,10.0650132620098,6.53402630986895,6.43149984711423,4.60287823194595,5.61027720310812,7.78758062725237,1.62942982160506,1.49288364732112,1.0108910337347,2.31486041475121,2.99277018814219,4.13823787980251,2.88099407688559,2.86339153887859,5.44291993210623,5.38077625196369,6.55912071918102,2.84573707812917,1.29340795759705,1.70195472151037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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=98432 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8CHE4 | |||
|association_with_transcript=-22bp_to_ENSMUST00000061047,ENSMUST00000135810_5end | |||
|cluster_id=chr1:108068227..108068306,+ | |||
|description=CAGE_peak_2_at_Phlpp1_5end | |||
|id=chr1:108068227..108068306,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0000540!1.72e-08!33;CL:0000047!1.72e-08!33;CL:0000031!1.72e-08!33;CL:0000404!1.72e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000540,1.65e-08,33;CL:0000047,1.65e-08,33;CL:0000031,1.65e-08,33;CL:0000404,1.65e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.45e-19!63;UBERON:0001017!3.19e-18!73;UBERON:0005743!3.19e-18!73;UBERON:0003056!1.09e-17!49;UBERON:0001049!2.66e-17!52;UBERON:0005068!2.66e-17!52;UBERON:0006241!2.66e-17!52;UBERON:0007135!2.66e-17!52;UBERON:0000955!3.01e-17!50;UBERON:0006238!3.01e-17!50;UBERON:0000073!3.17e-17!75;UBERON:0001016!3.17e-17!75;UBERON:0002616!5.32e-17!49;UBERON:0004121!4.59e-16!102;UBERON:0000924!4.59e-16!102;UBERON:0006601!4.59e-16!102;UBERON:0002020!9.29e-16!34;UBERON:0003080!1.94e-15!40;UBERON:0007811!2.26e-15!86;UBERON:0002346!2.43e-15!71;UBERON:0003075!2.43e-15!71;UBERON:0007284!2.43e-15!71;UBERON:0002780!5.25e-15!39;UBERON:0001890!5.25e-15!39;UBERON:0006240!5.25e-15!39;UBERON:0002791!6.63e-14!29;UBERON:0003528!6.63e-14!29;UBERON:0001893!6.63e-14!29;UBERON:0000153!3.79e-12!94;UBERON:0000956!5.10e-11!21;UBERON:0001869!5.10e-11!21;UBERON:0000203!5.10e-11!21;UBERON:0002619!2.45e-09!17;UBERON:0002021!3.15e-07!10;UBERON:0000411!3.15e-07!10;UBERON:0001950!3.15e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-19,54;UBERON:0004121,6.84e-19,95;UBERON:0000924,6.84e-19,95;UBERON:0006601,6.84e-19,95;UBERON:0002346,8.19e-19,64;UBERON:0003075,8.19e-19,64;UBERON:0007284,8.19e-19,64;UBERON:0010371,1.74e-18,73;UBERON:0001017,2.52e-18,73;UBERON:0003056,9.95e-18,49;UBERON:0001016,2.53e-17,75;UBERON:0001049,2.67e-17,52;UBERON:0005068,2.67e-17,52;UBERON:0006241,2.67e-17,52;UBERON:0007135,2.67e-17,52;UBERON:0002020,8.57e-16,34;UBERON:0000955,1.69e-15,47;UBERON:0006238,1.69e-15,47;UBERON:0003080,1.79e-15,40;UBERON:0002616,2.96e-15,46;UBERON:0002780,4.87e-15,39;UBERON:0001890,4.87e-15,39;UBERON:0006240,4.87e-15,39;UBERON:0003528,6.18e-14,29;UBERON:0002791,6.18e-14,29;UBERON:0001893,6.18e-14,29;UBERON:0010314,1.53e-11,92;UBERON:0000956,4.83e-11,21;UBERON:0001869,4.83e-11,21;UBERON:0000203,4.83e-11,21;UBERON:0002619,2.34e-09,17;UBERON:0002021,3.05e-07,10;UBERON:0000411,3.05e-07,10;UBERON:0001950,3.05e-07,10 | |||
|phase1_expression=4.00372117761985,2.44282785347553,3.18499467572675,5.44435580352294,3.00537437967808,2.51818907867835,1.16806320297763,9.68424925811822,3.37892933164,4.21316147379588,1.02730780935303,0.957265907944037,6.50562773738582,6.6439505838438,2.6648780945253,2.22722794128809,6.29605690315332,7.41336088591859,8.91243818437302,9.33657233955666,4.93251082876205,1.78723712161594,2.35079810225042,0.47997726838022,0.91763712426868,1.14846392823004,1.7230479846363,1.07735616342945,1.71021077510736,1.76421090831952,0.886922042621219,0,0,0,1.73310971850765,1.16364251750945,2.85837098767317,1.67412652294763,0.7813353445238,0,1.17646297606203,2.04913645487534,1.45653105909346,0.629484089877886,0.506884656097573,1.10128051297009,0.782391344348039,1.74420125104357,2.41654801007919,2.91644848611425,1.95980990275508,0,18.1205214542355,6.5282592781021,4.36921938885203,0.257259436035947,0.573066879877513,1.54701627683233,7.08107613008592,6.34789175126439,6.97214543856797,1.69422266034566,0,1.7997994345628,1.97773272513395,2.8419204597844,3.29560121570245,2.30530983192933,4.66603255388149,5.40023753326763,6.09942387919008,2.57085885963423,5.30084498283872,6.73699395682247,6.99671938433125,5.51531271966013,13.2139057199266,6.2566795661742,7.0659005297872,4.48413378282659,6.12967212136145,2.08365348222704,5.02529398202486,6.75315132038016,4.5839474333043,6.48182888042069,5.97961059356232,6.71038004971082,1.4387976733305,1.5870027622425,4.05810284182349,2.58127163094416,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,2.24711072210803,2.21559419351475,1.29893002301434,1.06001872353102,4.92951969218382,1.28326477414318,0,0,1.73192832808971,2.02687892380079,2.02209778005913,1.1418387971906,0.517875767294343,2.82040064223167,1.56136794089522,1.82679286987285,0.922461989024234,1.20578112442098,0.823120949949934,1.63366568728578,1.97755974187499,0.433798070759735,1.76922110389975,1.13236794963186,1.54589062922275,0.969750506270444,3.72783522436244,2.92780797011547,7.95897485891129,0.766371165625774,5.75112597628417,2.99951365496704,3.93917703926501,5.39246301857362,10.0650132620098,6.53402630986895,6.43149984711423,4.60287823194595,5.61027720310812,7.78758062725237,1.62942982160506,1.49288364732112,1.0108910337347,2.31486041475121,2.99277018814219,4.13823787980251,2.88099407688559,2.86339153887859,5.44291993210623,5.38077625196369,6.55912071918102,2.84573707812917,1.29340795759705,1.70195472151037,2.28736461413134,2.19195732427575,0.556094498451196,1.39300866608867,0.823128545631774,1.59227413454795,2.1066395619397,2.57347907114715,4.54661599032948,2.27838349789052,1.87620847984877,1.44049649168812,2.13070262026689,1.77087808572663,1.3884040159864,2.32533944750408,3.48755421819505,1.86824547787471,1.81015834904829,1.14917224855367,2.91847714365081,2.33919979880532,0.878200461164203,1.8788898626452,6.30869845692382,4.6307075570678,0.991256348951394,1.32225283331772,1.49301775374664,2.32236671860439,1.80414445850931,2.01683524623343,0.444756087689741,1.52180500890047,1.42358718463353,1.31759163779209,1.75934646160189,1.79060824837036,0.974820435595601,0.898819408654221,1.94524244887225,1.7922714592893,2.46568271239006,1.71372768914593,1.1270773567308,2.44381593414377,2.32742984601151,4.06787755363848,2.97211724484009,1.47610147979602,1.41298855057237,1.85095745882701,0.296452627087149,1.33476084572875,0.982794975566015,1.34917267430912,1.21716072833102,1.20588579876208,0.763877555344259,0.575392274901621,1.78348749452539,1.37280706594041,2.87536413054709,1.11642284300551,0.624075346229121,0.757736633841335,0.896987067609561,0.964887042726734,2.21703828199926,1.89491411770485,1.79261474086228,1.18821560042632,1.17345124144251,3.01511263395268,2.14239276797412,2.73187107000918,4.25614889086716,1.99318220683897,3.34855014180723,2.78567635016755,1.55416483679306,3.47157740595628,7.53956419696361,2.17562273527484,0.491764273019036,2.75936746304733,3.21101179975584,4.80567915028033,0.983609672260053,2.01976741763498,2.83957397474631,1.17131623288992,1.93881057959519,1.67278158566786,1.55959071857676,2.83076530788832,2.02405350837447,3.21481443702443,1.97643888973262,3.21321316421807,2.12910127812403,2.31485284767432,5.37526965866801,1.64970122972535,1.32745138339963,1.69946445308487,0.302323556964751,1.50884063804718,1.18120757152309,1.84461088766356,1.03371317267288,2.18120237686503,3.20847640546249,1.26414703174326,1.05418608574999,1.03135543248187,3.40439605753788,1.98067203434441,2.71653235943784,2.35770738534752,1.95074257006501,3.92411398724555,2.79733335023606,4.87143918583359,2.81606049676452,2.33015277950202,1.7642271844397,1.97863503529776,2.9063596805263,1.74907482291652,3.70054266409723,2.1338316966858,1.1659233465194,2.78137953015765,1.70870880797853,1.03193433981611,0.370389054739423,2.0720530270516,1.50363650493128,2.0590035588587,7.13909405974192,8.53703859174314,8.84479832348312,0,2.84702394223022,2.23651413839534,1.08005340821801,1.04544148007234,0.87345025498471,1.34864346384821,2.066336393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| |||
|short_description=p2@Phlpp1 | |||
}} |
Latest revision as of 05:41, 26 September 2015
Short description: | p2@Phlpp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Phlpp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENSMUST00000061047, ENSMUST00000135810_5end |
EntrezGene: | Phlpp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-10 | 23 |
neuron | 1.65e-08 | 33 |
neuronal stem cell | 1.65e-08 | 33 |
neuroblast | 1.65e-08 | 33 |
electrically signaling cell | 1.65e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.08e-19 | 54 |
ectoderm-derived structure | 6.84e-19 | 95 |
ectoderm | 6.84e-19 | 95 |
presumptive ectoderm | 6.84e-19 | 95 |
neurectoderm | 8.19e-19 | 64 |
neural plate | 8.19e-19 | 64 |
presumptive neural plate | 8.19e-19 | 64 |
ecto-epithelium | 1.74e-18 | 73 |
central nervous system | 2.52e-18 | 73 |
pre-chordal neural plate | 9.95e-18 | 49 |
nervous system | 2.53e-17 | 75 |
neural tube | 2.67e-17 | 52 |
neural rod | 2.67e-17 | 52 |
future spinal cord | 2.67e-17 | 52 |
neural keel | 2.67e-17 | 52 |
gray matter | 8.57e-16 | 34 |
brain | 1.69e-15 | 47 |
future brain | 1.69e-15 | 47 |
anterior neural tube | 1.79e-15 | 40 |
regional part of brain | 2.96e-15 | 46 |
regional part of forebrain | 4.87e-15 | 39 |
forebrain | 4.87e-15 | 39 |
future forebrain | 4.87e-15 | 39 |
brain grey matter | 6.18e-14 | 29 |
regional part of telencephalon | 6.18e-14 | 29 |
telencephalon | 6.18e-14 | 29 |
structure with developmental contribution from neural crest | 1.53e-11 | 92 |
cerebral cortex | 4.83e-11 | 21 |
cerebral hemisphere | 4.83e-11 | 21 |
pallium | 4.83e-11 | 21 |
regional part of cerebral cortex | 2.34e-09 | 17 |
occipital lobe | 3.05e-07 | 10 |
visual cortex | 3.05e-07 | 10 |
neocortex | 3.05e-07 | 10 |