FFCP PHASE1:Mm9::chr19:7016365..7016380,+: Difference between revisions
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{{FFCP|EntrezGene=12015|HGNC=|UniProt=Q61337|association_with_transcript=14bp_to_ENSMUST00000025910_5end|description=CAGE_peak_5_at_Bad_5end|id=chr19:7016365..7016380,+|ontology_enrichment_celltype=CL:0000117!2.28e-09!23;CL:0000337!2.28e-09!23;CL:0000540!6.97e-07!33;CL:0000047!6.97e-07!33;CL:0000031!6.97e-07!33;CL:0000404!6.97e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-12,23;CL:0000337,7.05e-12,23;CL:0000540,7.83e-08,33;CL:0000047,7.83e-08,33;CL:0000031,7.83e-08,33;CL:0000404,7.83e-08,33;CL:0000221,1.10e-07,44;CL:0000133,1.10e-07,44;CL:0002319,1.86e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.66e-10!52;UBERON:0005068!4.66e-10!52;UBERON:0006241!4.66e-10!52;UBERON:0007135!4.66e-10!52;UBERON:0002020!5.77e-10!34;UBERON:0001017!2.48e-09!73;UBERON:0005743!2.48e-09!73;UBERON:0000073!2.02e-08!75;UBERON:0001016!2.02e-08!75;UBERON:0002346!3.98e-08!71;UBERON:0003075!3.98e-08!71;UBERON:0007284!3.98e-08!71;UBERON:0002791!1.56e-07!29;UBERON:0003528!1.56e-07!29;UBERON:0001893!1.56e-07!29;UBERON:0002780!2.42e-07!39;UBERON:0001890!2.42e-07!39;UBERON:0006240!2.42e-07!39;UBERON:0003080!4.17e-07!40;UBERON:0000955!6.94e-07!50;UBERON:0006238!6.94e-07!50;UBERON:0002616!6.99e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.63e-10,34;UBERON:0001049,4.90e-09,52;UBERON:0005068,4.90e-09,52;UBERON:0006241,4.90e-09,52;UBERON:0007135,4.90e-09,52;UBERON:0001017,5.72e-08,73;UBERON:0000073,5.75e-08,54;UBERON:0003528,1.31e-07,29;UBERON:0002791,1.31e-07,29;UBERON:0001893,1.31e-07,29;UBERON:0001016,2.26e-07,75;UBERON:0002346,3.86e-07,64;UBERON:0003075,3.86e-07,64;UBERON:0007284,3.86e-07,64;UBERON:0002780,8.76e-07,39;UBERON:0001890,8.76e-07,39;UBERON:0006240,8.76e-07,39|phase1_expression=1.12104192973356,1.74487703819681,1.81999695755814,1.20985684522732,1.00179145989269,1.17515490338323,0.934450562382103,1.03298658753261,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.342401459862411,1.04904482902797,0.666219523631325,0,0,0.946386496074713,0.548457734422955,1.27316895539409,1.27564935226605,1.29078236561151,0.522399578277871,0.95995453676044,0.91763712426868,1.72269589234506,1.7230479846363,0.646413698057667,2.66032787238923,2.52030129759931,0.665191531965914,0.635030673459631,0,0,0.866554859253824,1.49611180822643,2.04169356262369,2.09265815368454,1.5626706890476,2.09409497589519,1.76469446409304,2.04913645487534,0,0.755380907853464,0.709638518536602,0.734187008646726,2.34717403304412,1.09012578190223,1.97717564461025,0.777719596297134,0.55994568650145,1.43752564364972,0.838913030288682,0.725362142011344,0.336093799142464,0.771778308107841,1.14613375975503,0,4.04632921719196,3.1739458756322,2.53532561402472,2.03306719241479,0,2.2497492932035,2.96659908770092,2.8419204597844,0.299600110518405,1.92109152660777,4.87341177849845,4.18518408828241,2.52389953621658,1.99955689082663,2.20868540951614,4.04219637409348,3.45043695665651,2.75765635983006,0,1.14918604276669,0.921639199537461,2.63772575460388,3.11057988248193,5.2091337055676,0.279182999001381,1.68828783009504,1.68078072554491,2.94628585473668,1.85083185038834,3.16879057903011,0.075726193333184,0.529000920747499,0.579728977403356,2.58127163094416,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,0.702222100658759,1.02258193546835,2.07828803682295,0.70667914902068,1.26759077799012,2.56652954828636,0,7.11066703153331,0.649473123033642,0.506719730950197,0,0.5709193985953,1.29468941823586,1.48442139064825,1.73485326766136,0.304465478312141,0.461230994512117,1.05505848386836,1.41106448562846,0.879666139307728,0.741584903203122,1.01219549843938,0,0.485300549842228,0.662524555381181,0.969750506270444,1.86391761218122,0.878342391034642,1.46612694769419,0.766371165625774,0.599075622529601,1.19980546198682,0.508280908292259,0.748953197024114,0.915001205637253,2.26177833803156,0.347648640384553,1.53429274398198,0.83115217823824,1.29793010454206,0.916554274652847,1.7416975885413,0.505445516867349,0.631325567659422,1.04096354370163,0.689706313300419,0.360124259610698,0.753524089178575,0.884474488967262,0.512454881139399,1.49922759295566,0.258703370739016,0.646703978798527,1.32374256117473,1.05570674498369,0.876782929710299,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,1.02939162845886,1.13665399758237,0,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,1.07309360559848,1.16765342367169,0.493679549740441,1.31333971263276,1.70244500046297,0.292399974850665,0.439100230582101,1.20785776884335,0.841159794256509,3.08713837137853,1.32167513193519,0,0.213288250535234,0.696710015581316,0.77320476793256,0.605050573870028,0.444756087689741,0.760902504450237,1.89811624617805,1.4822905925161,1.25667604400135,1.1937388322469,0.779856348476481,0.898819408654221,0.648414149624083,1.1948476395262,0.758671603812327,1.02823661348756,0,0.814605311381257,0.969762435838129,1.1221731182451,1.20149420536089,1.7713217757552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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12015 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q61337 | |||
|association_with_transcript=14bp_to_ENSMUST00000025910_5end | |||
|cluster_id=chr19:7016365..7016380,+ | |||
|description=CAGE_peak_5_at_Bad_5end | |||
|id=chr19:7016365..7016380,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.28e-09!23;CL:0000337!2.28e-09!23;CL:0000540!6.97e-07!33;CL:0000047!6.97e-07!33;CL:0000031!6.97e-07!33;CL:0000404!6.97e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-12,23;CL:0000337,7.05e-12,23;CL:0000540,7.83e-08,33;CL:0000047,7.83e-08,33;CL:0000031,7.83e-08,33;CL:0000404,7.83e-08,33;CL:0000221,1.10e-07,44;CL:0000133,1.10e-07,44;CL:0002319,1.86e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.66e-10!52;UBERON:0005068!4.66e-10!52;UBERON:0006241!4.66e-10!52;UBERON:0007135!4.66e-10!52;UBERON:0002020!5.77e-10!34;UBERON:0001017!2.48e-09!73;UBERON:0005743!2.48e-09!73;UBERON:0000073!2.02e-08!75;UBERON:0001016!2.02e-08!75;UBERON:0002346!3.98e-08!71;UBERON:0003075!3.98e-08!71;UBERON:0007284!3.98e-08!71;UBERON:0002791!1.56e-07!29;UBERON:0003528!1.56e-07!29;UBERON:0001893!1.56e-07!29;UBERON:0002780!2.42e-07!39;UBERON:0001890!2.42e-07!39;UBERON:0006240!2.42e-07!39;UBERON:0003080!4.17e-07!40;UBERON:0000955!6.94e-07!50;UBERON:0006238!6.94e-07!50;UBERON:0002616!6.99e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.63e-10,34;UBERON:0001049,4.90e-09,52;UBERON:0005068,4.90e-09,52;UBERON:0006241,4.90e-09,52;UBERON:0007135,4.90e-09,52;UBERON:0001017,5.72e-08,73;UBERON:0000073,5.75e-08,54;UBERON:0003528,1.31e-07,29;UBERON:0002791,1.31e-07,29;UBERON:0001893,1.31e-07,29;UBERON:0001016,2.26e-07,75;UBERON:0002346,3.86e-07,64;UBERON:0003075,3.86e-07,64;UBERON:0007284,3.86e-07,64;UBERON:0002780,8.76e-07,39;UBERON:0001890,8.76e-07,39;UBERON:0006240,8.76e-07,39 | |||
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| |||
|short_description=p5@Bad | |||
}} |
Latest revision as of 03:27, 26 September 2015
Short description: | p5@Bad |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bad_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000025910_5end |
EntrezGene: | Bad |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.05e-12 | 23 |
neuron | 7.83e-08 | 33 |
neuronal stem cell | 7.83e-08 | 33 |
neuroblast | 7.83e-08 | 33 |
electrically signaling cell | 7.83e-08 | 33 |
ectodermal cell | 1.10e-07 | 44 |
neurectodermal cell | 1.10e-07 | 44 |
neural cell | 1.86e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.63e-10 | 34 |
neural tube | 4.90e-09 | 52 |
neural rod | 4.90e-09 | 52 |
future spinal cord | 4.90e-09 | 52 |
neural keel | 4.90e-09 | 52 |
central nervous system | 5.72e-08 | 73 |
regional part of nervous system | 5.75e-08 | 54 |
brain grey matter | 1.31e-07 | 29 |
regional part of telencephalon | 1.31e-07 | 29 |
telencephalon | 1.31e-07 | 29 |
nervous system | 2.26e-07 | 75 |
neurectoderm | 3.86e-07 | 64 |
neural plate | 3.86e-07 | 64 |
presumptive neural plate | 3.86e-07 | 64 |
regional part of forebrain | 8.76e-07 | 39 |
forebrain | 8.76e-07 | 39 |
future forebrain | 8.76e-07 | 39 |