FFCP PHASE1:Mm9::chr19:53867887..53867901,+: Difference between revisions
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{{FFCP|EntrezGene=73713|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=89bp_to_ENSMUST00000162910_5end|description=CAGE_peak_8_at_Rbm20_5end|id=chr19:53867887..53867901,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.88e-27!18;UBERON:0000948!1.88e-27!18;UBERON:0005498!1.88e-27!18;UBERON:0004140!1.88e-27!18;UBERON:0009881!1.88e-27!18;UBERON:0004141!1.88e-27!18;UBERON:0003084!1.88e-27!18;UBERON:0007005!1.88e-27!18;UBERON:0004139!1.88e-27!18;UBERON:0004291!1.88e-27!18;UBERON:0004535!4.51e-24!23;UBERON:0001009!4.51e-24!23;UBERON:0004872!7.65e-16!33;UBERON:0003103!3.19e-13!43;UBERON:0003914!3.24e-10!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.46e-57,18;UBERON:0000948,1.46e-57,18;UBERON:0005498,1.46e-57,18;UBERON:0004140,1.46e-57,18;UBERON:0009881,1.46e-57,18;UBERON:0004141,1.46e-57,18;UBERON:0003084,1.46e-57,18;UBERON:0007005,1.46e-57,18;UBERON:0004139,1.46e-57,18;UBERON:0004291,1.46e-57,18;UBERON:0004535,6.46e-45,23;UBERON:0001009,6.46e-45,23;UBERON:0004872,4.24e-31,33;UBERON:0003103,1.09e-23,43;UBERON:0003914,1.32e-21,47;UBERON:0003081,2.98e-11,87;UBERON:0010314,1.38e-10,92;UBERON:0000025,2.44e-08,114;UBERON:0000926,7.24e-08,120;UBERON:0004120,7.24e-08,120;UBERON:0006603,7.24e-08,120;UBERON:0004111,1.02e-07,122;UBERON:0001048,6.31e-07,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,1.65721314909647,1.77087808572663,2.46827380619805,2.09280550275367,2.41446061259657,3.85325629811659,3.62031669809657,3.77585167381919,4.62092214411378,3.94739966048397,3.07370161407471,4.96563749413376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p8@Rbm20}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73713 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENSMUST00000162910_5end | |||
|cluster_id=chr19:53867887..53867901,+ | |||
|description=CAGE_peak_8_at_Rbm20_5end | |||
|id=chr19:53867887..53867901,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.88e-27!18;UBERON:0000948!1.88e-27!18;UBERON:0005498!1.88e-27!18;UBERON:0004140!1.88e-27!18;UBERON:0009881!1.88e-27!18;UBERON:0004141!1.88e-27!18;UBERON:0003084!1.88e-27!18;UBERON:0007005!1.88e-27!18;UBERON:0004139!1.88e-27!18;UBERON:0004291!1.88e-27!18;UBERON:0004535!4.51e-24!23;UBERON:0001009!4.51e-24!23;UBERON:0004872!7.65e-16!33;UBERON:0003103!3.19e-13!43;UBERON:0003914!3.24e-10!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.46e-57,18;UBERON:0000948,1.46e-57,18;UBERON:0005498,1.46e-57,18;UBERON:0004140,1.46e-57,18;UBERON:0009881,1.46e-57,18;UBERON:0004141,1.46e-57,18;UBERON:0003084,1.46e-57,18;UBERON:0007005,1.46e-57,18;UBERON:0004139,1.46e-57,18;UBERON:0004291,1.46e-57,18;UBERON:0004535,6.46e-45,23;UBERON:0001009,6.46e-45,23;UBERON:0004872,4.24e-31,33;UBERON:0003103,1.09e-23,43;UBERON:0003914,1.32e-21,47;UBERON:0003081,2.98e-11,87;UBERON:0010314,1.38e-10,92;UBERON:0000025,2.44e-08,114;UBERON:0000926,7.24e-08,120;UBERON:0004120,7.24e-08,120;UBERON:0006603,7.24e-08,120;UBERON:0004111,1.02e-07,122;UBERON:0001048,6.31e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,1.65721314909647,1.77087808572663,2.46827380619805,2.09280550275367,2.41446061259657,3.85325629811659,3.62031669809657,3.77585167381919,4.62092214411378,3.94739966048397,3.07370161407471,4.96563749413376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Rbm20 | |||
}} |
Latest revision as of 23:17, 25 September 2015
Short description: | p8@Rbm20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rbm20_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 89bp_to_ENSMUST00000162910_5end |
EntrezGene: | Rbm20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.46e-57 | 18 |
heart | 1.46e-57 | 18 |
primitive heart tube | 1.46e-57 | 18 |
primary heart field | 1.46e-57 | 18 |
anterior lateral plate mesoderm | 1.46e-57 | 18 |
heart tube | 1.46e-57 | 18 |
heart primordium | 1.46e-57 | 18 |
cardiac mesoderm | 1.46e-57 | 18 |
cardiogenic plate | 1.46e-57 | 18 |
heart rudiment | 1.46e-57 | 18 |
cardiovascular system | 6.46e-45 | 23 |
circulatory system | 6.46e-45 | 23 |
splanchnic layer of lateral plate mesoderm | 4.24e-31 | 33 |
compound organ | 1.09e-23 | 43 |
epithelial tube | 1.32e-21 | 47 |
lateral plate mesoderm | 2.98e-11 | 87 |
structure with developmental contribution from neural crest | 1.38e-10 | 92 |
tube | 2.44e-08 | 114 |
mesoderm | 7.24e-08 | 120 |
mesoderm-derived structure | 7.24e-08 | 120 |
presumptive mesoderm | 7.24e-08 | 120 |
anatomical conduit | 1.02e-07 | 122 |
primordium | 6.31e-07 | 134 |