FFCP PHASE1:Mm9::chr19:5118224..5118322,-: Difference between revisions
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{{FFCP|EntrezGene=16594|HGNC=|MCL_coexpression_id=1|UniProt=D3YXZ3,E9QL75|association_with_transcript=0bp_to_ENSMUST00000025798,ENSMUST00000113727,ENSMUST00000113728,ENSMUST00000113731_5end|description=CAGE_peak_1_at_Klc2_5end|id=chr19:5118224..5118322,-|ontology_enrichment_celltype=CL:0000117!9.72e-13!23;CL:0000337!9.72e-13!23;CL:0000221!3.34e-08!44;CL:0000133!3.34e-08!44;CL:0002319!7.21e-08!43;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.72e-13,23;CL:0000337,9.72e-13,23;CL:0000221,3.34e-08,44;CL:0000133,3.34e-08,44;CL:0002319,7.21e-08,43;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.92e-23!52;UBERON:0005068!1.92e-23!52;UBERON:0006241!1.92e-23!52;UBERON:0007135!1.92e-23!52;UBERON:0000033!9.03e-23!63;UBERON:0001017!1.23e-22!73;UBERON:0005743!1.23e-22!73;UBERON:0000073!1.42e-22!75;UBERON:0001016!1.42e-22!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0002616!7.08e-22!49;UBERON:0002346!1.74e-20!71;UBERON:0003075!1.74e-20!71;UBERON:0007284!1.74e-20!71;UBERON:0004121!3.05e-19!102;UBERON:0000924!3.05e-19!102;UBERON:0006601!3.05e-19!102;UBERON:0002020!3.87e-18!34;UBERON:0003056!6.15e-18!49;UBERON:0003080!6.69e-18!40;UBERON:0002780!3.20e-17!39;UBERON:0001890!3.20e-17!39;UBERON:0006240!3.20e-17!39;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0007811!1.46e-13!86;UBERON:0000153!3.90e-12!94;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0002619!2.72e-09!17;UBERON:0000025!5.43e-09!114;UBERON:0004111!1.16e-08!122;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.94e-25,92;UBERON:0000073,6.94e-25,54;UBERON:0001049,1.92e-23,52;UBERON:0005068,1.92e-23,52;UBERON:0006241,1.92e-23,52;UBERON:0007135,1.92e-23,52;UBERON:0001017,1.23e-22,73;UBERON:0001016,1.42e-22,75;UBERON:0002346,4.64e-21,64;UBERON:0003075,4.64e-21,64;UBERON:0007284,4.64e-21,64;UBERON:0000955,2.84e-20,47;UBERON:0006238,2.84e-20,47;UBERON:0002616,9.73e-20,46;UBERON:0004121,3.04e-19,95;UBERON:0000924,3.04e-19,95;UBERON:0006601,3.04e-19,95;UBERON:0002020,3.87e-18,34;UBERON:0003056,6.14e-18,49;UBERON:0003080,6.69e-18,40;UBERON:0010371,2.43e-17,73;UBERON:0002780,3.20e-17,39;UBERON:0001890,3.20e-17,39;UBERON:0006240,3.20e-17,39;UBERON:0003528,2.42e-15,29;UBERON:0002791,2.42e-15,29;UBERON:0001893,2.42e-15,29;UBERON:0000956,4.47e-11,21;UBERON:0001869,4.47e-11,21;UBERON:0000203,4.47e-11,21;UBERON:0002619,2.72e-09,17;UBERON:0000025,5.43e-09,114;UBERON:0004111,1.16e-08,122;UBERON:0002021,2.67e-07,10;UBERON:0000411,2.67e-07,10;UBERON:0001950,2.67e-07,10|phase1_expression=23.8621782186143,3.48975407639361,3.63999391511629,11.4936400296595,10.0179145989269,7.72244650794693,6.30754129607919,7.10178278928669,8.16574588479667,14.9801296846076,7.0199366972457,7.8974437405383,4.10881751834894,5.68232615723483,1.66554880907831,3.23960427823721,3.49780939064073,5.36285681109004,5.21034847701807,5.09267582157636,36.4835714748089,3.27660138962921,3.39559725880616,5.27974995218242,4.35877634027623,2.8711598205751,5.1691439539089,5.38678081714723,3.99049180858385,3.52842181663903,6.43018480900384,5.71527606113668,4.30545351309199,0,2.88851619751275,2.32728503501889,4.90006455029686,5.85944283031671,2.3440060335714,1.57057123192139,2.94115744015507,4.78131839470912,5.82612423637384,4.65818226509636,5.77848507951233,5.87349606917381,6.25913075478431,9.3750817243592,11.643367684927,10.8880743481599,7.41928034614421,10.062679505548,7.21465206048266,0.725362142011344,6.04968838456435,4.63066984864705,5.44413535883638,8.76642556871652,35.20306418957,39.1453324661304,43.7343668419264,8.80995783379743,7.11435836888911,14.3983954765024,14.8329954385046,21.314403448383,11.9840044207362,12.6792040756113,25.9224030771194,23.3560273313825,20.6118462124354,77.125765789027,67.1440364492905,19.1085646775328,23.4821403994679,17.4651569455904,90.2950224194987,104.320555215598,116.740965274745,36.1368428380731,35.8631562921446,31.2548022334056,127.586630543631,66.4059879837382,78.3855011095036,46.2566879193658,49.2606015564896,46.0406631188492,9.39004797331482,9.3708734532414,8.69593466105033,5.16254326188832,2.719885334831,3.77792234146472,0.649776417447669,5.82434953226536,16.1511083151515,6.13549161281008,5.45550609666024,6.00677276667578,19.5772353489586,12.8326477414318,20.3844191765317,28.4426681261332,6.27824018932521,5.82727690592727,5.05524445014783,10.3907330544345,1.29468941823586,11.4300447079915,7.80683970447611,8.22056791442781,8.07154240396205,6.93324146542064,9.52468527799209,11.8126595849895,9.14621380617183,7.80836527367523,10.6153266233985,8.57364304721269,9.27534377533653,5.33362778448744,1.86391761218122,59.7272825903556,75.1913677460304,3.32094171771169,1.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16594 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YXZ3,E9QL75 | |||
|association_with_transcript=0bp_to_ENSMUST00000025798,ENSMUST00000113727,ENSMUST00000113728,ENSMUST00000113731_5end | |||
|cluster_id=chr19:5118224..5118322,- | |||
|description=CAGE_peak_1_at_Klc2_5end | |||
|id=chr19:5118224..5118322,- | |||
|ontology_enrichment_celltype=CL:0000117!9.72e-13!23;CL:0000337!9.72e-13!23;CL:0000221!3.34e-08!44;CL:0000133!3.34e-08!44;CL:0002319!7.21e-08!43;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.72e-13,23;CL:0000337,9.72e-13,23;CL:0000221,3.34e-08,44;CL:0000133,3.34e-08,44;CL:0002319,7.21e-08,43;CL:0000540,1.17e-07,33;CL:0000047,1.17e-07,33;CL:0000031,1.17e-07,33;CL:0000404,1.17e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-23!52;UBERON:0005068!1.92e-23!52;UBERON:0006241!1.92e-23!52;UBERON:0007135!1.92e-23!52;UBERON:0000033!9.03e-23!63;UBERON:0001017!1.23e-22!73;UBERON:0005743!1.23e-22!73;UBERON:0000073!1.42e-22!75;UBERON:0001016!1.42e-22!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0002616!7.08e-22!49;UBERON:0002346!1.74e-20!71;UBERON:0003075!1.74e-20!71;UBERON:0007284!1.74e-20!71;UBERON:0004121!3.05e-19!102;UBERON:0000924!3.05e-19!102;UBERON:0006601!3.05e-19!102;UBERON:0002020!3.87e-18!34;UBERON:0003056!6.15e-18!49;UBERON:0003080!6.69e-18!40;UBERON:0002780!3.20e-17!39;UBERON:0001890!3.20e-17!39;UBERON:0006240!3.20e-17!39;UBERON:0002791!2.42e-15!29;UBERON:0003528!2.42e-15!29;UBERON:0001893!2.42e-15!29;UBERON:0007811!1.46e-13!86;UBERON:0000153!3.90e-12!94;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0002619!2.72e-09!17;UBERON:0000025!5.43e-09!114;UBERON:0004111!1.16e-08!122;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.94e-25,92;UBERON:0000073,6.94e-25,54;UBERON:0001049,1.92e-23,52;UBERON:0005068,1.92e-23,52;UBERON:0006241,1.92e-23,52;UBERON:0007135,1.92e-23,52;UBERON:0001017,1.23e-22,73;UBERON:0001016,1.42e-22,75;UBERON:0002346,4.64e-21,64;UBERON:0003075,4.64e-21,64;UBERON:0007284,4.64e-21,64;UBERON:0000955,2.84e-20,47;UBERON:0006238,2.84e-20,47;UBERON:0002616,9.73e-20,46;UBERON:0004121,3.04e-19,95;UBERON:0000924,3.04e-19,95;UBERON:0006601,3.04e-19,95;UBERON:0002020,3.87e-18,34;UBERON:0003056,6.14e-18,49;UBERON:0003080,6.69e-18,40;UBERON:0010371,2.43e-17,73;UBERON:0002780,3.20e-17,39;UBERON:0001890,3.20e-17,39;UBERON:0006240,3.20e-17,39;UBERON:0003528,2.42e-15,29;UBERON:0002791,2.42e-15,29;UBERON:0001893,2.42e-15,29;UBERON:0000956,4.47e-11,21;UBERON:0001869,4.47e-11,21;UBERON:0000203,4.47e-11,21;UBERON:0002619,2.72e-09,17;UBERON:0000025,5.43e-09,114;UBERON:0004111,1.16e-08,122;UBERON:0002021,2.67e-07,10;UBERON:0000411,2.67e-07,10;UBERON:0001950,2.67e-07,10 | |||
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| |||
|short_description=p1@Klc2 | |||
}} |
Latest revision as of 22:39, 25 September 2015
Short description: | p1@Klc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000025798, ENSMUST00000113727, ENSMUST00000113728, ENSMUST00000113731_5end |
EntrezGene: | Klc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.72e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.72e-13 | 23 |
ectodermal cell | 3.34e-08 | 44 |
neurectodermal cell | 3.34e-08 | 44 |
neural cell | 7.21e-08 | 43 |
neuron | 1.17e-07 | 33 |
neuronal stem cell | 1.17e-07 | 33 |
neuroblast | 1.17e-07 | 33 |
electrically signaling cell | 1.17e-07 | 33 |