FFCP PHASE1:Hg19::chr6:109704348..109704364,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=350bp_to_BC030091_5end | |||
|cluster_id=chr6:109704348..109704364,+ | |||
|coexpression_cluster_id=C1429 | |||
|description=CAGE_peak_3_at_BC030091_5end | |||
|id=chr6:109704348..109704364,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.86e-37!140;CL:0000860!2.20e-34!45;CL:0002057!1.05e-32!42;CL:0002031!1.14e-32!124;CL:0000037!3.88e-32!172;CL:0000566!3.88e-32!172;CL:0002087!4.74e-32!119;CL:0000988!1.03e-31!182;CL:0002032!6.44e-29!165;CL:0000837!6.44e-29!165;CL:0000557!7.30e-27!71;CL:0002009!8.70e-26!65;CL:0000766!1.14e-25!76;CL:0000839!2.75e-24!70;CL:0002194!8.94e-24!63;CL:0000576!8.94e-24!63;CL:0000040!8.94e-24!63;CL:0000559!8.94e-24!63;CL:0000763!4.07e-21!112;CL:0000049!4.07e-21!112;CL:0000134!6.63e-13!358;CL:0002320!1.30e-12!365;CL:0002393!1.43e-12!9;CL:0002397!1.43e-12!9;CL:0000219!9.83e-11!390;CL:0000034!3.61e-09!444;CL:0000048!7.45e-09!430;CL:0000723!1.16e-08!436;CL:0000838!8.97e-08!52;CL:0000542!1.70e-07!53;CL:0000051!1.70e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.80e-36;6!CL:0002397;4.80e-36;6!CL:0000767;9.75e-20;3!CL:0000623;1.51e-19;3!CL:0000875;1.02e-18;3!CL:0002396;1.02e-18;3!CL:0000766;1.47e-14;69!CL:0000576;1.11e-13;48!CL:0001014;4.57e-13;2!CL:0001016;4.57e-13;2!CL:0000791;1.09e-11;18!CL:0000789;1.09e-11;18!CL:0002419;1.09e-11;18!CL:0002087;1.41e-11;104!CL:0000624;1.26e-09;6!CL:0000738;1.72e-09;136!CL:0000084;2.91e-08;25!CL:0000094;1.06e-07;8!CL:0000542;5.86e-07;53!CL:0000763;6.98e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.66e-53,9;CL:0002397,4.66e-53,9;CL:0000738,4.79e-43,136;CL:0002031,6.48e-37,120;CL:0000037,7.30e-34,168;CL:0002032,3.39e-33,161;CL:0000837,3.39e-33,161;CL:0000988,7.14e-32,177;CL:0002087,2.48e-30,115;CL:0000766,2.85e-26,72;CL:0000860,1.89e-25,42;CL:0002057,1.89e-25,42;CL:0000557,4.68e-25,67;CL:0000473,6.46e-22,48;CL:0000234,6.46e-22,48;CL:0002009,1.12e-21,61;CL:0000763,2.33e-20,108;CL:0000049,2.33e-20,108;CL:0000767,4.48e-20,3;CL:0000839,8.18e-20,66;CL:0000623,2.15e-19,3;CL:0000825,2.15e-19,3;CL:0000875,2.43e-19,3;CL:0002396,2.43e-19,3;CL:0002194,5.71e-17,59;CL:0000576,5.71e-17,59;CL:0000040,5.71e-17,59;CL:0000559,5.71e-17,59;CL:0000134,3.64e-13,354;CL:0001014,4.60e-13,2;CL:0001016,4.60e-13,2;CL:0002320,8.48e-13,361;CL:0000838,3.44e-12,52;CL:0000542,6.38e-12,53;CL:0000051,6.38e-12,53;CL:0000791,9.25e-12,18;CL:0000789,9.25e-12,18;CL:0002420,9.25e-12,18;CL:0002419,9.25e-12,18;CL:0000790,9.25e-12,18;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000624,1.45e-09,6;CL:0000034,2.02e-09,441;CL:0000084,2.60e-08,25;CL:0000827,2.60e-08,25;CL:0000094,8.00e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.24e-17;42!CL:0000790;1.09e-11;18!CL:0000051;5.86e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-24!102;UBERON:0003061!1.81e-24!102;UBERON:0002371!4.05e-23!80;UBERON:0002193!1.42e-20!112;UBERON:0001474!2.28e-20!86;UBERON:0002405!5.47e-18!115;UBERON:0004765!7.18e-16!101;UBERON:0001434!7.18e-16!101;UBERON:0002384!5.66e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-21,76;UBERON:0001474,7.48e-20,82;UBERON:0002390,4.89e-18,98;UBERON:0003061,4.89e-18,98;UBERON:0004765,8.86e-18,90;UBERON:0002405,4.30e-17,93;UBERON:0002193,5.07e-16,108;UBERON:0001434,1.19e-15,100;UBERON:0002384,2.68e-12,371;UBERON:0002204,6.01e-08,167;UBERON:0003081,9.07e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,3.93364276848904,1.91914699048606,3.2511385896376,0,0,0,0.0774672005803016,0,0,1.10799081706375,1.60435557976113,1.08505435357926,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.449446968890169,1.22433556948361,0.962787081228281,2.55734850319616,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.75374599577023,1.5644487552606,0.868755378820466,0,0.736555271975129,0.316462387440884,1.05627643155971,2.97646019951061,1.04829322754188,1.01095768031846,0.450530678524519,0.64290234678832,1.71007646244749,1.39241674039363,1.64397738388171,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0.560508562981536,0.263384084775077,1.180258620683,1.57204305099666,1.02800749499755,0,0.977766799900771,0,0,0.557052284425868,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0.127986611154418,0,0,0,1.81446068902259,2.40696176205157,1.30341963494519,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.44119953416961,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,2.36436912242313,2.15627574859517,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.635020748171649,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.851692475380653,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0.288109595976299,0.248505071130865,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0.321506296930038,0.137539436597234,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0,0,0.368211900503681,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.266107110487916,0.230467975111559,0.514464028312255,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@BC030091 | |||
}} |
Latest revision as of 18:10, 30 July 2015
Short description: | p3@BC030091 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC030091_5end |
Coexpression cluster: | C1429_CD14_Basophils_Natural_immature_Peripheral_CD14CD16_CD4 |
Association with transcript: | 350bp_to_BC030091_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-21 | 76 |
bone element | 7.48e-20 | 82 |
hematopoietic system | 4.89e-18 | 98 |
blood island | 4.89e-18 | 98 |
skeletal element | 8.86e-18 | 90 |
immune system | 4.30e-17 | 93 |
hemolymphoid system | 5.07e-16 | 108 |
skeletal system | 1.19e-15 | 100 |
connective tissue | 2.68e-12 | 371 |
musculoskeletal system | 6.01e-08 | 167 |
lateral plate mesoderm | 9.07e-07 | 203 |