FFCP PHASE1:Hg19::chr5:98269499..98269504,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:98269499..98269504,+ | |||
|coexpression_cluster_id=C656 | |||
|description=CAGE_peak_at_chr5:98269499..98269504,+ | |||
|id=chr5:98269499..98269504,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.18e-87!172;CL:0000566!1.18e-87!172;CL:0000988!4.77e-81!182;CL:0002032!1.53e-79!165;CL:0000837!1.53e-79!165;CL:0000738!3.43e-78!140;CL:0002087!2.22e-66!119;CL:0002031!1.32e-64!124;CL:0000763!2.13e-49!112;CL:0000049!2.13e-49!112;CL:0002057!3.93e-45!42;CL:0000860!3.35e-41!45;CL:0000557!1.02e-40!71;CL:0002009!7.38e-38!65;CL:0000766!4.47e-37!76;CL:0000839!2.41e-35!70;CL:0002194!4.19e-35!63;CL:0000576!4.19e-35!63;CL:0000040!4.19e-35!63;CL:0000559!4.19e-35!63;CL:0000134!2.38e-25!358;CL:0000542!3.50e-25!53;CL:0000051!3.50e-25!53;CL:0002320!2.91e-24!365;CL:0000838!4.21e-24!52;CL:0000219!1.90e-20!390;CL:0000945!1.01e-17!24;CL:0000826!1.01e-17!24;CL:0000034!3.72e-17!444;CL:0000048!1.77e-16!430;CL:0000723!7.79e-16!436;CL:0002393!6.11e-15!9;CL:0002397!6.11e-15!9;CL:0000236!7.20e-14!14;CL:0000451!4.73e-11!10;CL:0000453!1.80e-08!5;CL:0000990!3.96e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.76e-20;48!CL:0002087;1.05e-18;104!CL:0002393;1.77e-17;6!CL:0002397;1.77e-17;6!CL:0000766;3.63e-17;69!CL:0000860;4.21e-17;33!CL:0002057;4.21e-17;33!CL:0000945;8.18e-15;24!CL:0000451;4.00e-12;10!CL:0000738;5.51e-12;136!CL:0000473;7.83e-12;39!CL:0000234;7.83e-12;39!CL:0000236;2.23e-11;13!CL:0000542;3.77e-11;53!CL:0000988;1.01e-10;177!CL:0000763;1.43e-10;100!CL:0000784;7.08e-10;3!CL:0000767;2.11e-09;3!CL:0000453;2.74e-09;5!CL:0000623;1.18e-08;3!CL:0000226;1.24e-08;3!CL:0000842;1.24e-08;3!CL:0000875;1.31e-08;3!CL:0002396;1.31e-08;3!CL:0000990;9.47e-08;8!CL:0001014;4.62e-07;2!CL:0001016;4.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.62e-66,168;CL:0000738,8.41e-65,136;CL:0000988,1.10e-61,177;CL:0002032,1.45e-55,161;CL:0000837,1.45e-55,161;CL:0002087,3.79e-50,115;CL:0002031,1.16e-47,120;CL:0000860,5.01e-36,42;CL:0002057,5.01e-36,42;CL:0000763,1.53e-35,108;CL:0000049,1.53e-35,108;CL:0000557,1.14e-33,67;CL:0000766,7.11e-31,72;CL:0002009,7.63e-31,61;CL:0000473,1.40e-30,48;CL:0000234,1.40e-30,48;CL:0000839,2.14e-27,66;CL:0002194,3.45e-27,59;CL:0000576,3.45e-27,59;CL:0000040,3.45e-27,59;CL:0000559,3.45e-27,59;CL:0002393,1.85e-24,9;CL:0002397,1.85e-24,9;CL:0000134,1.14e-22,354;CL:0002320,6.54e-22,361;CL:0000219,3.10e-19,386;CL:0000034,1.40e-17,441;CL:0000542,2.90e-17,53;CL:0000051,2.90e-17,53;CL:0000048,5.78e-16,427;CL:0000838,6.01e-16,52;CL:0000723,1.63e-15,433;CL:0000945,6.36e-15,24;CL:0000826,6.36e-15,24;CL:0000236,1.20e-13,14;CL:0000451,3.94e-12,10;CL:0000784,7.10e-10,3;CL:0000767,2.05e-09,3;CL:0000453,2.68e-09,5;CL:0000623,8.61e-09,3;CL:0000825,8.61e-09,3;CL:0000226,1.06e-08,3;CL:0000842,1.06e-08,3;CL:0000875,1.09e-08,3;CL:0002396,1.09e-08,3;CL:0000817,1.46e-08,3;CL:0000990,9.35e-08,8;CL:0001014,4.62e-07,2;CL:0001016,4.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-24;42!CL:0000051;3.77e-11;53!CL:0000049;6.54e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!1.26e-13!51;DOID:0060083!1.26e-13!51;DOID:1240!1.66e-12!39;DOID:8692!1.08e-09!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.35e-36!80;UBERON:0002390!5.07e-33!102;UBERON:0003061!5.07e-33!102;UBERON:0001474!1.66e-32!86;UBERON:0002193!1.30e-29!112;UBERON:0004765!3.08e-25!101;UBERON:0001434!3.08e-25!101;UBERON:0002405!2.35e-24!115;UBERON:0002384!3.89e-24!375;UBERON:0002204!6.15e-10!167;UBERON:0003081!1.56e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.66e-31,76;UBERON:0001474,6.46e-28,82;UBERON:0002390,6.85e-27,98;UBERON:0003061,6.85e-27,98;UBERON:0004765,1.27e-24,90;UBERON:0002405,1.55e-23,93;UBERON:0002193,1.75e-23,108;UBERON:0001434,2.97e-21,100;UBERON:0002384,7.11e-21,371;UBERON:0002204,2.89e-09,167;UBERON:0003081,3.85e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.157421562627358,9.8341069212226,5.37361157336098,11.9208414953379,0,0,0,1.23947520928483,1.13735385989937,13.2120197700681,32.6857291033808,14.6397446653203,13.237663113667,0,0,0,0.290796477559129,0,0.727752183563449,0.464858073811369,0.822335776043652,1.23882548358041,0.28769239232215,0.256160706529101,1.18241114944293,4.48169384957604,5.16387746867061,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,4.28517449319264,4.49300637906531,2.55734850319616,0.329851300186716,0,0.426224750532694,1.45104619314292,1.70215567407342,0,0.502497330513487,0.521482918420201,3.69221035998698,1.21079900526674,5.15588690382591,2.84816148696796,8.66146673878961,11.9058407980424,6.9187353017764,5.50410292617826,4.05477610672067,2.4108838004562,3.99017841237748,2.58591680358817,4.93193215164512,0,0.546138611262131,0.889509253863555,0,0.800791974072025,1.72425731986345,2.64417949113945,1.90810750907073,3.41527781465669,5.87237189370939,4.96955196562797,7.93027971474155,11.2101712596307,6.58460211937693,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,1.62961133316795,1.4203434172042,0,0.891283655081389,0,1.32920336750173,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0.802622484269139,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,2.41928091869679,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,27.4264217951143,39.4676488438288,30.4595151090243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,3.60299883542404,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,8.27529192848094,1.94064817373566,4.49200626979119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,6.90285442619574,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85803175125719,1.73123055571734,0,0.797131363644112,0,0,0.423347165447766,0,0.280797178113459,0.684704037099577,0.47003968731907,0,0,1.4452926759333,0,4.25846237690326,3.09154810280188,0.614481528616916,0.447352215784832,1.00109485027145,0,0,1.23087398947712,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,2.33861130376032,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0.37950746544837,3.65554131654871,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,3.83155057352899,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3219453115256,23.2140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,1.32864840313363,8.83253128981559,0,0,0,0,1.06691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95506146489851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:98269499..98269504,+ | |||
}} |
Latest revision as of 17:41, 30 July 2015
Short description: | p@chr5:98269499..98269504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:98269499..98269504, + |
Coexpression cluster: | C656_CD14_immature_Dendritic_Basophils_CD34_CD133_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.66e-31 | 76 |
bone element | 6.46e-28 | 82 |
hematopoietic system | 6.85e-27 | 98 |
blood island | 6.85e-27 | 98 |
skeletal element | 1.27e-24 | 90 |
immune system | 1.55e-23 | 93 |
hemolymphoid system | 1.75e-23 | 108 |
skeletal system | 2.97e-21 | 100 |
connective tissue | 7.11e-21 | 371 |
musculoskeletal system | 2.89e-09 | 167 |
lateral plate mesoderm | 3.85e-08 | 203 |