FFCP PHASE1:Hg19::chr5:95998714..95998744,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |||
|TSSclassifier=strong | |||
|UniProt=E7EN75,D6RGF7 | |||
|association_with_transcript=0bp_to_ENST00000506811,ENST00000510245,ENST00000514055_5end | |||
|cluster_id=chr5:95998714..95998744,+ | |||
|coexpression_cluster_id=C4533 | |||
|description=CAGE_peak_5_at_CAST_5end | |||
|id=chr5:95998714..95998744,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.91e-15!43;CL:0000223!3.28e-13!59;CL:0000066!1.23e-12!254;CL:0000359!4.62e-08!32;CL:0000220!1.12e-07!246;CL:0000192!2.27e-07!42;CL:0000514!2.27e-07!42;CL:0002321!2.87e-07!248;CL:0000680!4.81e-07!57;CL:0000056!4.81e-07!57;CL:0000355!4.81e-07!57;CL:0002251!5.08e-07!21;CL:0000187!9.92e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.74e-11;42!CL:0000359;1.15e-07;32!CL:0002251;9.34e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.15e-15,42;CL:0000223,5.80e-13,58;CL:0000066,1.97e-12,253;CL:0000359,4.14e-08,32;CL:0000192,3.81e-07,43;CL:0000514,3.81e-07,43;CL:0000680,7.04e-07,58;CL:0000056,7.04e-07,58;CL:0000355,7.04e-07,58;CL:0002321,7.74e-07,250;CL:0002251,7.92e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;6.28e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.32e-08!106;DOID:120!7.06e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:120;5.59e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.33e-08,106;DOID:120,6.45e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.46e-19!169;UBERON:0000925!3.46e-19!169;UBERON:0006595!3.46e-19!169;UBERON:0001007!2.72e-16!155;UBERON:0001555!2.72e-16!155;UBERON:0007026!2.72e-16!155;UBERON:0003104!1.23e-15!238;UBERON:0009142!1.23e-15!238;UBERON:0000468!7.39e-14!659;UBERON:0000467!1.73e-13!625;UBERON:0000480!2.60e-13!626;UBERON:0004921!3.66e-13!129;UBERON:0004185!3.66e-13!129;UBERON:0000077!2.28e-12!130;UBERON:0001004!1.36e-11!72;UBERON:0000481!1.42e-11!347;UBERON:0000062!2.10e-11!511;UBERON:0002100!2.18e-11!216;UBERON:0000926!3.25e-11!448;UBERON:0004120!3.25e-11!448;UBERON:0006603!3.25e-11!448;UBERON:0003100!1.09e-09!41;UBERON:0002050!1.25e-09!605;UBERON:0005423!1.25e-09!605;UBERON:0000475!1.85e-09!365;UBERON:0000923!2.45e-09!604;UBERON:0005291!2.45e-09!604;UBERON:0006598!2.45e-09!604;UBERON:0002532!2.45e-09!604;UBERON:0003102!3.48e-09!95;UBERON:0000922!5.81e-09!612;UBERON:0000065!1.45e-08!53;UBERON:0000161!3.66e-08!35;UBERON:0000486!4.86e-08!82;UBERON:0003134!6.19e-08!37;UBERON:0000474!6.19e-08!37;UBERON:0008947!1.19e-07!38;UBERON:0003258!1.19e-07!38;UBERON:0005156!1.35e-07!59;UBERON:0000990!1.35e-07!59;UBERON:0001048!1.42e-07!168;UBERON:0001637!2.00e-07!42;UBERON:0003509!2.00e-07!42;UBERON:0004572!2.00e-07!42;UBERON:0000490!2.08e-07!138;UBERON:0002385!3.05e-07!63;UBERON:0001015!3.05e-07!63;UBERON:0000383!3.05e-07!63;UBERON:0005795!3.71e-07!22;UBERON:0003975!4.80e-07!22;UBERON:0000072!5.07e-07!46;UBERON:0001041!5.48e-07!98;UBERON:0000063!6.29e-07!97;UBERON:0000914!7.84e-07!83;UBERON:0002329!7.84e-07!83;UBERON:0003077!7.84e-07!83;UBERON:0003059!7.84e-07!83;UBERON:0007282!7.84e-07!83;UBERON:0009618!7.84e-07!83;UBERON:0007285!7.84e-07!83;UBERON:0001134!9.11e-07!61;UBERON:0002036!9.11e-07!61;UBERON:0003082!9.11e-07!61;UBERON:0004573!9.64e-07!33;UBERON:0004571!9.64e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003100;3.05e-07;41!UBERON:0003134;6.11e-07;33!UBERON:0004921;7.56e-07;33!UBERON:0000065;7.78e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.40e-17,160;UBERON:0000925,2.40e-17,160;UBERON:0006595,2.40e-17,160;UBERON:0001007,1.27e-14,145;UBERON:0001555,1.27e-14,145;UBERON:0007026,1.27e-14,145;UBERON:0004921,1.24e-11,118;UBERON:0001004,2.15e-11,74;UBERON:0002100,9.61e-11,199;UBERON:0003102,1.46e-10,99;UBERON:0003100,1.33e-09,41;UBERON:0000065,1.87e-08,54;UBERON:0000161,4.72e-08,36;UBERON:0000486,6.57e-08,83;UBERON:0003134,7.59e-08,37;UBERON:0000474,7.59e-08,37;UBERON:0008947,1.12e-07,38;UBERON:0003258,1.12e-07,38;UBERON:0005156,1.37e-07,59;UBERON:0000990,1.37e-07,59;UBERON:0001637,1.81e-07,42;UBERON:0003509,1.81e-07,42;UBERON:0004572,1.81e-07,42;UBERON:0005795,3.37e-07,22;UBERON:0002385,4.36e-07,64;UBERON:0001015,4.36e-07,64;UBERON:0000383,4.36e-07,64;UBERON:0003975,4.37e-07,22;UBERON:0005423,5.87e-07,581;UBERON:0002050,6.21e-07,564;UBERON:0000072,6.48e-07,47;UBERON:0000490,7.01e-07,148;UBERON:0004573,8.82e-07,33;UBERON:0004571,8.82e-07,33;UBERON:0000995,9.73e-07,21 | |||
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| |||
|short_description=p5@CAST | |||
}} |
Latest revision as of 09:00, 19 September 2015
Short description: | p5@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAST_5end |
Coexpression cluster: | C4533_lung_gall_rectal_salivary_Prostate_Keratinocyte_amniotic |
Association with transcript: | 0bp_to_ENST00000506811, ENST00000510245, ENST00000514055_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | E7EN75D6RGF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.15e-15 | 42 |
endodermal cell | 5.80e-13 | 58 |
epithelial cell | 1.97e-12 | 253 |
vascular associated smooth muscle cell | 4.14e-08 | 32 |
smooth muscle cell | 3.81e-07 | 43 |
smooth muscle myoblast | 3.81e-07 | 43 |
muscle precursor cell | 7.04e-07 | 58 |
myoblast | 7.04e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.04e-07 | 58 |
embryonic cell | 7.74e-07 | 250 |
epithelial cell of alimentary canal | 7.92e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.33e-08 | 106 |
female reproductive organ cancer | 6.45e-07 | 27 |