FFCP PHASE1:Hg19::chr5:95998673..95998713,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |||
|TSSclassifier=strong | |||
|UniProt=D6RBR1 | |||
|association_with_transcript=0bp_to_ENST00000514845_5end | |||
|cluster_id=chr5:95998673..95998713,+ | |||
|coexpression_cluster_id=C4533 | |||
|description=CAGE_peak_7_at_CAST_5end | |||
|id=chr5:95998673..95998713,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.27e-15!43;CL:0000066!3.15e-15!254;CL:0000223!3.23e-12!59;CL:0002251!5.08e-08!21;CL:0002368!9.86e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.94e-12;42!CL:0002251;7.62e-08;20!CL:0002368;7.55e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.24e-15,42;CL:0000066,4.65e-15,253;CL:0000223,2.96e-12,58;CL:0002251,5.53e-08,20;CL:0002368,9.07e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.95e-08!106;DOID:0050687!3.22e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.52e-08,143;DOID:305,3.59e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.77e-14!169;UBERON:0000925!1.77e-14!169;UBERON:0006595!1.77e-14!169;UBERON:0001007!2.60e-11!155;UBERON:0001555!2.60e-11!155;UBERON:0007026!2.60e-11!155;UBERON:0001004!9.75e-09!72;UBERON:0004921!1.39e-08!129;UBERON:0004185!1.39e-08!129;UBERON:0000077!5.80e-08!130;UBERON:0003100!6.71e-08!41;UBERON:0000065!1.17e-07!53;UBERON:0003104!4.22e-07!238;UBERON:0009142!4.22e-07!238;UBERON:0005153!9.87e-07!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.20e-14,160;UBERON:0000925,4.20e-14,160;UBERON:0006595,4.20e-14,160;UBERON:0001007,5.33e-11,145;UBERON:0001555,5.33e-11,145;UBERON:0007026,5.33e-11,145;UBERON:0001004,2.33e-08,74;UBERON:0004921,2.85e-08,118;UBERON:0003100,6.05e-08,41;UBERON:0000065,2.24e-07,54;UBERON:0003102,3.67e-07,99 | |||
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| |||
|short_description=p7@CAST | |||
}} |
Latest revision as of 09:00, 19 September 2015
Short description: | p7@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAST_5end |
Coexpression cluster: | C4533_lung_gall_rectal_salivary_Prostate_Keratinocyte_amniotic |
Association with transcript: | 0bp_to_ENST00000514845_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | D6RBR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.24e-15 | 42 |
epithelial cell | 4.65e-15 | 253 |
endodermal cell | 2.96e-12 | 58 |
epithelial cell of alimentary canal | 5.53e-08 | 20 |
respiratory epithelial cell | 9.07e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.20e-14 | 160 |
endoderm | 4.20e-14 | 160 |
presumptive endoderm | 4.20e-14 | 160 |
digestive system | 5.33e-11 | 145 |
digestive tract | 5.33e-11 | 145 |
primitive gut | 5.33e-11 | 145 |
respiratory system | 2.33e-08 | 74 |
subdivision of digestive tract | 2.85e-08 | 118 |
female organism | 6.05e-08 | 41 |
respiratory tract | 2.24e-07 | 54 |
surface structure | 3.67e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.52e-08 | 143 |
carcinoma | 3.59e-08 | 106 |