FFCP PHASE1:Mm9::chr18:61380121..61380140,+: Difference between revisions
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{{FFCP|EntrezGene=225600|HGNC=|MCL_coexpression_id=16|UniProt=Q8K0A8|association_with_transcript=0bp_to_ENSMUST00000025468_5end|description=CAGE_peak_1_at_Pde6a_5end|id=chr18:61380121..61380140,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.98e-12!9;UBERON:0000019!5.98e-12!9;UBERON:0000047!5.98e-12!9;UBERON:0004088!5.98e-12!9;UBERON:0002104!5.98e-12!9;UBERON:0001456!5.98e-12!9;UBERON:0003072!5.98e-12!9;UBERON:0003071!5.98e-12!9;UBERON:0004128!5.98e-12!9;UBERON:0001444!8.11e-10!11;UBERON:0000020!5.14e-09!12;UBERON:0001032!5.14e-09!12;UBERON:0004456!5.14e-09!12;UBERON:0005085!2.46e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.01e-18,9;UBERON:0000019,3.01e-18,9;UBERON:0000047,3.01e-18,9;UBERON:0010312,3.01e-18,9;UBERON:0004088,3.01e-18,9;UBERON:0002104,3.01e-18,9;UBERON:0001456,3.01e-18,9;UBERON:0003072,3.01e-18,9;UBERON:0004128,3.01e-18,9;UBERON:0003071,3.01e-18,9;UBERON:0001444,4.28e-15,11;UBERON:0000020,6.55e-14,12;UBERON:0001032,6.55e-14,12;UBERON:0004456,6.55e-14,12;UBERON:0000033,6.61e-13,13;UBERON:0005085,6.61e-13,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,375.007387189697,0,0,0,0,0,0.640568601424249,1.59292931751539,795.771568393212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0.444756087689741,1.90225626112559,0,2.47048432086016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0|short_description=p1@Pde6a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225600 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0A8 | |||
|association_with_transcript=0bp_to_ENSMUST00000025468_5end | |||
|cluster_id=chr18:61380121..61380140,+ | |||
|description=CAGE_peak_1_at_Pde6a_5end | |||
|id=chr18:61380121..61380140,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.98e-12!9;UBERON:0000019!5.98e-12!9;UBERON:0000047!5.98e-12!9;UBERON:0004088!5.98e-12!9;UBERON:0002104!5.98e-12!9;UBERON:0001456!5.98e-12!9;UBERON:0003072!5.98e-12!9;UBERON:0003071!5.98e-12!9;UBERON:0004128!5.98e-12!9;UBERON:0001444!8.11e-10!11;UBERON:0000020!5.14e-09!12;UBERON:0001032!5.14e-09!12;UBERON:0004456!5.14e-09!12;UBERON:0005085!2.46e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.01e-18,9;UBERON:0000019,3.01e-18,9;UBERON:0000047,3.01e-18,9;UBERON:0010312,3.01e-18,9;UBERON:0004088,3.01e-18,9;UBERON:0002104,3.01e-18,9;UBERON:0001456,3.01e-18,9;UBERON:0003072,3.01e-18,9;UBERON:0004128,3.01e-18,9;UBERON:0003071,3.01e-18,9;UBERON:0001444,4.28e-15,11;UBERON:0000020,6.55e-14,12;UBERON:0001032,6.55e-14,12;UBERON:0004456,6.55e-14,12;UBERON:0000033,6.61e-13,13;UBERON:0005085,6.61e-13,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,375.007387189697,0,0,0,0,0,0.640568601424249,1.59292931751539,795.771568393212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0.444756087689741,1.90225626112559,0,2.47048432086016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0 | |||
|short_description=p1@Pde6a | |||
}} |
Latest revision as of 14:07, 1 October 2015
Short description: | p1@Pde6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pde6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000025468_5end |
EntrezGene: | Pde6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.01e-18 | 9 |
camera-type eye | 3.01e-18 | 9 |
simple eye | 3.01e-18 | 9 |
immature eye | 3.01e-18 | 9 |
ocular region | 3.01e-18 | 9 |
visual system | 3.01e-18 | 9 |
face | 3.01e-18 | 9 |
optic cup | 3.01e-18 | 9 |
optic vesicle | 3.01e-18 | 9 |
eye primordium | 3.01e-18 | 9 |
subdivision of head | 4.28e-15 | 11 |
sense organ | 6.55e-14 | 12 |
sensory system | 6.55e-14 | 12 |
entire sense organ system | 6.55e-14 | 12 |
head | 6.61e-13 | 13 |
ectodermal placode | 6.61e-13 | 13 |