FFCP PHASE1:Hg19::chr5:49962447..49962488,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79668 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26124 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9T2 | |||
|association_with_transcript=-33bp_to_ENST00000515175_5end | |||
|cluster_id=chr5:49962447..49962488,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_PARP8_5end | |||
|id=chr5:49962447..49962488,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.81e-33!140;CL:0002087!1.07e-31!119;CL:0000037!3.92e-26!172;CL:0000566!3.92e-26!172;CL:0002031!4.95e-26!124;CL:0002032!3.63e-24!165;CL:0000837!3.63e-24!165;CL:0000988!7.33e-22!182;CL:0000766!1.09e-15!76;CL:0000838!1.41e-15!52;CL:0000542!1.70e-15!53;CL:0000051!1.70e-15!53;CL:0002194!2.05e-14!63;CL:0000576!2.05e-14!63;CL:0000040!2.05e-14!63;CL:0000559!2.05e-14!63;CL:0002009!8.45e-14!65;CL:0000791!1.72e-13!18;CL:0000789!1.72e-13!18;CL:0002420!1.72e-13!18;CL:0002419!1.72e-13!18;CL:0000790!1.72e-13!18;CL:0002057!3.23e-12!42;CL:0000557!1.04e-11!71;CL:0000839!1.14e-11!70;CL:0000084!1.16e-10!25;CL:0000827!1.16e-10!25;CL:0000763!3.08e-10!112;CL:0000049!3.08e-10!112;CL:0000860!4.11e-10!45;CL:0000625!4.39e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.45e-24;18!CL:0000789;1.45e-24;18!CL:0002419;1.45e-24;18!CL:0000084;2.23e-17;25!CL:0000625;5.38e-16;11!CL:0002087;3.13e-11;104!CL:0000094;6.88e-11;8!CL:0000542;1.18e-10;53!CL:0000576;2.69e-10;48!CL:0000473;1.64e-09;39!CL:0000234;1.64e-09;39!CL:0000766;2.52e-09;69!CL:0000624;2.67e-09;6!CL:0000738;9.00e-09;136!CL:0000860;4.25e-08;33!CL:0002057;4.25e-08;33!CL:0000081;2.42e-07;11!CL:0002393;6.48e-07;6!CL:0002397;6.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.16e-41,136;CL:0002087,1.39e-39,115;CL:0002031,1.45e-32,120;CL:0000037,4.72e-30,168;CL:0002032,6.81e-29,161;CL:0000837,6.81e-29,161;CL:0000988,3.46e-27,177;CL:0000791,1.72e-24,18;CL:0000789,1.72e-24,18;CL:0002420,1.72e-24,18;CL:0002419,1.72e-24,18;CL:0000790,1.72e-24,18;CL:0000766,2.75e-24,72;CL:0002194,1.55e-19,59;CL:0000576,1.55e-19,59;CL:0000040,1.55e-19,59;CL:0000559,1.55e-19,59;CL:0002009,1.67e-18,61;CL:0000084,3.42e-17,25;CL:0000827,3.42e-17,25;CL:0000838,4.03e-17,52;CL:0000557,4.93e-17,67;CL:0000542,1.35e-16,53;CL:0000051,1.35e-16,53;CL:0000839,3.24e-16,66;CL:0000625,5.20e-16,11;CL:0000473,9.74e-16,48;CL:0000234,9.74e-16,48;CL:0000763,4.48e-13,108;CL:0000049,4.48e-13,108;CL:0000860,3.05e-12,42;CL:0002057,3.05e-12,42;CL:0000094,6.58e-11,8;CL:0000624,2.77e-09,6;CL:0000081,2.34e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.45e-24;18!CL:0000051;1.18e-10;53!CL:0002057;1.05e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-21!115;UBERON:0002390!2.36e-16!102;UBERON:0003061!2.36e-16!102;UBERON:0002193!1.49e-13!112;UBERON:0003080!1.10e-10!42;UBERON:0002780!1.72e-10!41;UBERON:0001890!1.72e-10!41;UBERON:0006240!1.72e-10!41;UBERON:0002619!4.67e-10!22;UBERON:0001049!5.01e-10!57;UBERON:0005068!5.01e-10!57;UBERON:0006241!5.01e-10!57;UBERON:0007135!5.01e-10!57;UBERON:0002371!1.02e-09!80;UBERON:0001950!4.22e-09!20;UBERON:0001893!1.69e-08!34;UBERON:0001474!1.77e-08!86;UBERON:0002020!1.79e-08!34;UBERON:0003528!1.79e-08!34;UBERON:0000956!2.06e-08!25;UBERON:0000203!2.06e-08!25;UBERON:0001869!2.43e-08!32;UBERON:0002616!2.82e-08!59;UBERON:0002791!4.23e-08!33;UBERON:0004765!4.93e-07!101;UBERON:0001434!4.93e-07!101;UBERON:0000955!9.30e-07!69;UBERON:0006238!9.30e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.50e-17;22!UBERON:0001950;5.99e-15;20!UBERON:0000956;4.42e-14;25!UBERON:0000203;4.42e-14;25!UBERON:0001869;8.52e-11;32!UBERON:0000178;8.71e-11;15!UBERON:0000179;8.71e-11;15!UBERON:0000463;8.71e-11;15!UBERON:0002791;8.31e-10;32!UBERON:0001893;1.59e-09;34!UBERON:0002780;3.99e-09;41!UBERON:0001890;3.99e-09;41!UBERON:0003528;9.49e-09;34!UBERON:0002020;9.49e-09;34!UBERON:0000200;8.10e-07;6!UBERON:0002390;9.63e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.52e-25,98;UBERON:0003061,3.52e-25,98;UBERON:0002193,2.01e-23,108;UBERON:0002619,2.73e-17,22;UBERON:0002405,1.66e-15,93;UBERON:0001950,1.84e-15,20;UBERON:0000956,1.52e-14,25;UBERON:0000203,1.52e-14,25;UBERON:0002371,1.25e-13,76;UBERON:0007023,5.61e-13,114;UBERON:0002780,7.41e-13,41;UBERON:0001890,7.41e-13,41;UBERON:0003080,7.41e-13,41;UBERON:0006240,7.41e-13,41;UBERON:0001869,1.45e-12,32;UBERON:0001474,8.28e-12,82;UBERON:0001893,1.83e-11,34;UBERON:0002791,2.80e-11,32;UBERON:0000178,7.25e-11,15;UBERON:0000179,7.25e-11,15;UBERON:0000463,7.25e-11,15;UBERON:0003528,2.81e-10,34;UBERON:0002020,2.81e-10,34;UBERON:0004765,8.44e-10,90;UBERON:0001434,2.08e-08,100;UBERON:0000073,2.48e-08,53;UBERON:0002616,2.48e-08,53;UBERON:0001049,3.32e-08,56;UBERON:0005068,3.32e-08,56;UBERON:0006241,3.32e-08,56;UBERON:0007135,3.32e-08,56;UBERON:0000200,4.87e-07,6;UBERON:0003056,5.32e-07,61 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.382067028739756,0.328402357799783,0.629686250509434,3.14691421479123,8.44424675813868,5.88301268601089,0.919421224478927,0.6024118375565,0,0.232401601740905,0.568676929949686,0.293600439334847,4.43196326825502,6.41742231904453,5.20826089718044,2.01523926815932,2.91504299417082,2.06060454107349,1.59938062657521,2.26725566213286,0.970336244751265,0.929716147622738,0.822335776043652,1.54853185447552,1.43846196161075,1.2808035326455,1.41889337933151,2.75796544589295,2.5819387343353,4.06279459783025,0.376484679085209,1.91034305040492,0.674170453335254,1.83650335422542,2.24650318953266,0.639337125799041,0,1.39624560335142,1.27867425159808,0.580418477257168,0.56738522469114,0,0.75374599577023,2.08593167368081,1.52032191293582,0.605399502633369,1.47311054395026,0.632924774881769,1.26753171787165,1.70083439972035,1.04829322754188,3.14520167210186,3.15371474967163,2.4108838004562,0.285012743741249,1.79025009479181,0.365328307529268,1.75996244461323,2.73069305631066,1.77901850772711,2.13365111283254,2.80277190925209,2.29900975981793,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,4.96955196562797,0,2.24203425192614,1.05353633910031,9.24535919535015,7.8602152549833,11.1024809459735,3.51091640320424,6.8443675993054,9.9424039204294,7.79306913631645,5.34770193048833,13.5518717438425,12.1843642020992,14.3526047795458,3.71464827204458,3.25148368899696,1.97325485524411,2.76350017785848,2.02862160014537,7.26604159494096,8.29376567078111,11.4989076185474,5.09892042139048,11.8798353016596,10.9960782554442,10.3738073727996,11.7869203299916,11.7195021694155,9.50452044448374,11.895434407144,8.70308955850045,9.99445812418767,10.4181990899367,9.85353596305256,14.1124720257313,15.2440911596599,11.8756011183895,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.589405839739707,0,0,3.57002133020152,2.26368658489047,2.26028532882071,2.38490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.61246251376468,0,0.619954687054593,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,1.54584324027377,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.860413786167011,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.354920400119532,0,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0.882926198829301,0,0.171567810298526,0.219500570817251,0,0.301586917234893,0,0,0,0,0.231860809950154,0.587043471179108,0.144366447761074,0,0,0,0,1.96973604869918,1.17002132569619,1.0404181360211,0,0.839910640994298,0.283550194484773,0.268675568108545,0.290633938513962,0,0,0,0,0.144119953416961,0,0.571481048629521,0,0,0,0.308482478109971,0,1.14330573052231,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,2.12961773587702,18.914952979385,17.2502059887614,16.5562516800875,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,5.24304916763028,8.97484377612075,6.63064821497657,0,0,0,0.207970861530807,0.178428988797162,0,0,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0,0,5.99627275756373,4.52999821719095,9.49875264450655,0,0,0,0,0.61384789315225,0.561320188866147,0.256278298511402,0,0.804269605718038,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0,0.40101294060657,0.552485933615378,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.618246069886334,0.54941678891006,0.330037999682352,0,0.650060246036521,0,0,0,0.15350367472613,0,0.429680979473094,0.145016693914229,0.170453254832202,0.178064071293475,0,0.192190067365106,0.765676274967505,0.6069466851333,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0,0,1.22386941009813,0,0,1.7737206141467,0.229723400206959,1.52234282769651,2.29391162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| |||
|short_description=p3@PARP8 | |||
}} |
Latest revision as of 01:48, 18 September 2015
Short description: | p3@PARP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PARP8_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -33bp_to_ENST00000515175_5end |
EntrezGene: | PARP8 |
HGNC: | 26124 |
UniProt: | D6R9T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.52e-25 | 98 |
blood island | 3.52e-25 | 98 |
hemolymphoid system | 2.01e-23 | 108 |
regional part of cerebral cortex | 2.73e-17 | 22 |
immune system | 1.66e-15 | 93 |
neocortex | 1.84e-15 | 20 |
cerebral cortex | 1.52e-14 | 25 |
pallium | 1.52e-14 | 25 |
bone marrow | 1.25e-13 | 76 |
adult organism | 5.61e-13 | 114 |
regional part of forebrain | 7.41e-13 | 41 |
forebrain | 7.41e-13 | 41 |
anterior neural tube | 7.41e-13 | 41 |
future forebrain | 7.41e-13 | 41 |
cerebral hemisphere | 1.45e-12 | 32 |
bone element | 8.28e-12 | 82 |
telencephalon | 1.83e-11 | 34 |
regional part of telencephalon | 2.80e-11 | 32 |
blood | 7.25e-11 | 15 |
haemolymphatic fluid | 7.25e-11 | 15 |
organism substance | 7.25e-11 | 15 |
brain grey matter | 2.81e-10 | 34 |
gray matter | 2.81e-10 | 34 |
skeletal element | 8.44e-10 | 90 |
skeletal system | 2.08e-08 | 100 |
regional part of nervous system | 2.48e-08 | 53 |
regional part of brain | 2.48e-08 | 53 |
neural tube | 3.32e-08 | 56 |
neural rod | 3.32e-08 | 56 |
future spinal cord | 3.32e-08 | 56 |
neural keel | 3.32e-08 | 56 |
gyrus | 4.87e-07 | 6 |
pre-chordal neural plate | 5.32e-07 | 61 |