FFCP PHASE1:Hg19::chr5:443280..443314,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30378 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000510441_5end | |||
|cluster_id=chr5:443280..443314,+ | |||
|description=CAGE_peak_1_at_EXOC3_5end | |||
|id=chr5:443280..443314,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.53e-16!45;CL:0002057!6.20e-15!42;CL:0000766!4.50e-11!76;CL:0002009!1.96e-10!65;CL:0000557!3.99e-10!71;CL:0002194!1.42e-09!63;CL:0000576!1.42e-09!63;CL:0000040!1.42e-09!63;CL:0000559!1.42e-09!63;CL:0000839!1.33e-08!70;CL:0000763!4.02e-08!112;CL:0000049!4.02e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.34e-13;33!CL:0002057;4.34e-13;33!CL:0000576;2.84e-09;48!CL:0000473;1.15e-08;39!CL:0000234;1.15e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.20e-15,42;CL:0002057,6.20e-15,42;CL:0000473,6.15e-12,48;CL:0000234,6.15e-12,48;CL:0000766,1.86e-10,72;CL:0002009,7.95e-10,61;CL:0000557,1.62e-09,67;CL:0002194,5.68e-09,59;CL:0000576,5.68e-09,59;CL:0000040,5.68e-09,59;CL:0000559,5.68e-09,59;CL:0000839,5.15e-08,66;CL:0000763,1.41e-07,108;CL:0000049,1.41e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-22!115;UBERON:0001049!1.52e-11!57;UBERON:0005068!1.52e-11!57;UBERON:0006241!1.52e-11!57;UBERON:0007135!1.52e-11!57;UBERON:0002616!4.08e-10!59;UBERON:0000062!1.88e-09!511;UBERON:0002371!3.18e-09!80;UBERON:0002390!4.11e-09!102;UBERON:0003061!4.11e-09!102;UBERON:0003075!2.16e-08!86;UBERON:0007284!2.16e-08!86;UBERON:0000955!2.54e-08!69;UBERON:0006238!2.54e-08!69;UBERON:0002346!3.70e-08!90;UBERON:0002193!5.25e-08!112;UBERON:0001474!1.53e-07!86;UBERON:0002020!1.70e-07!34;UBERON:0003528!1.70e-07!34;UBERON:0002780!2.33e-07!41;UBERON:0001890!2.33e-07!41;UBERON:0006240!2.33e-07!41;UBERON:0001893!2.41e-07!34;UBERON:0003080!3.19e-07!42;UBERON:0001737!3.62e-07!9;UBERON:0002791!4.54e-07!33;UBERON:0002619!8.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.63e-07;9!UBERON:0001557;3.63e-07;9!UBERON:0000073;6.85e-07;53!UBERON:0002616;6.85e-07;53!UBERON:0002619;9.12e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.55e-22,114;UBERON:0001049,1.02e-11,56;UBERON:0005068,1.02e-11,56;UBERON:0006241,1.02e-11,56;UBERON:0007135,1.02e-11,56;UBERON:0000073,3.89e-11,53;UBERON:0002616,3.89e-11,53;UBERON:0002371,1.24e-08,76;UBERON:0002390,1.55e-08,98;UBERON:0003061,1.55e-08,98;UBERON:0000955,2.03e-08,68;UBERON:0006238,2.03e-08,68;UBERON:0003075,2.09e-08,82;UBERON:0007284,2.09e-08,82;UBERON:0002346,3.69e-08,86;UBERON:0003528,1.70e-07,34;UBERON:0002020,1.70e-07,34;UBERON:0002193,1.83e-07,108;UBERON:0002780,2.33e-07,41;UBERON:0001890,2.33e-07,41;UBERON:0003080,2.33e-07,41;UBERON:0006240,2.33e-07,41;UBERON:0001893,2.41e-07,34;UBERON:0001737,3.62e-07,9;UBERON:0001474,5.50e-07,82;UBERON:0002405,7.16e-07,93;UBERON:0002619,8.99e-07,22 | |||
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| |||
|short_description=p1@EXOC3 | |||
}} |
Latest revision as of 00:59, 18 September 2015
Short description: | p1@EXOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EXOC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000510441_5end |
EntrezGene: | EXOC3 |
HGNC: | 30378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.20e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.20e-15 | 42 |
defensive cell | 6.15e-12 | 48 |
phagocyte | 6.15e-12 | 48 |
myeloid leukocyte | 1.86e-10 | 72 |
macrophage dendritic cell progenitor | 7.95e-10 | 61 |
granulocyte monocyte progenitor cell | 1.62e-09 | 67 |
monopoietic cell | 5.68e-09 | 59 |
monocyte | 5.68e-09 | 59 |
monoblast | 5.68e-09 | 59 |
promonocyte | 5.68e-09 | 59 |
myeloid lineage restricted progenitor cell | 5.15e-08 | 66 |
myeloid cell | 1.41e-07 | 108 |
common myeloid progenitor | 1.41e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.55e-22 | 114 |
neural tube | 1.02e-11 | 56 |
neural rod | 1.02e-11 | 56 |
future spinal cord | 1.02e-11 | 56 |
neural keel | 1.02e-11 | 56 |
regional part of nervous system | 3.89e-11 | 53 |
regional part of brain | 3.89e-11 | 53 |
bone marrow | 1.24e-08 | 76 |
hematopoietic system | 1.55e-08 | 98 |
blood island | 1.55e-08 | 98 |
brain | 2.03e-08 | 68 |
future brain | 2.03e-08 | 68 |
neural plate | 2.09e-08 | 82 |
presumptive neural plate | 2.09e-08 | 82 |
neurectoderm | 3.69e-08 | 86 |
brain grey matter | 1.70e-07 | 34 |
gray matter | 1.70e-07 | 34 |
hemolymphoid system | 1.83e-07 | 108 |
regional part of forebrain | 2.33e-07 | 41 |
forebrain | 2.33e-07 | 41 |
anterior neural tube | 2.33e-07 | 41 |
future forebrain | 2.33e-07 | 41 |
telencephalon | 2.41e-07 | 34 |
larynx | 3.62e-07 | 9 |
bone element | 5.50e-07 | 82 |
immune system | 7.16e-07 | 93 |
regional part of cerebral cortex | 8.99e-07 | 22 |