FFCP PHASE1:Hg19::chr5:32104819..32104823,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:32104819..32104823,- | |||
|description=CAGE_peak_at_chr5:32104819..32104823,- | |||
|id=chr5:32104819..32104823,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;5.37e-13;1!CL:0000164;5.37e-13;1!CL:0000502;5.37e-13;1!CL:0000172;5.37e-13;1!CL:0000222;5.37e-13;1!CL:0000173;5.37e-13;1!CL:0000054;3.92e-07;2!CL:0000137;3.92e-07;2!CL:0000092;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.33e-13,1;CL:0000164,3.33e-13,1;CL:0000502,3.33e-13,1;CL:0000172,3.33e-13,1;CL:0000173,3.33e-13,1;CL:0002351,3.33e-13,1;CL:0000054,4.17e-07,2;CL:0000137,4.17e-07,2;CL:0000092,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;5.37e-13;1 | |||
|ontology_enrichment_disease=DOID:162!2.44e-15!235;DOID:14566!1.10e-14!239;DOID:0050687!2.88e-12!143;DOID:305!3.33e-10!106;DOID:0050686!6.10e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.37e-13;1!DOID:1357;5.37e-13;1!DOID:4430;5.37e-13;1!DOID:200;3.92e-07;2!DOID:4305;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.33e-13,1;DOID:0050619,3.76e-13,1;DOID:1357,3.76e-13,1;DOID:200,4.17e-07,2;DOID:4305,4.17e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.37e-13;1!UBERON:0001764;5.37e-13;1!UBERON:0001825;5.37e-13;1!UBERON:0009661;5.37e-13;1!UBERON:0002950;5.37e-13;1!UBERON:0001891;5.37e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.76e-13,1;UBERON:0001825,3.76e-13,1;UBERON:0002038,9.73e-13,1;UBERON:0009661,9.73e-13,1;UBERON:0002950,9.73e-13,1;UBERON:0001891,9.73e-13,1;UBERON:0009616,9.73e-13,1;UBERON:0010286,9.73e-13,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0.545812300115692,0,0,0,0,0.329851300186716,0,0.426224750532694,0,1.13477044938228,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,1.04535523804977,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0.973269740605272,0,0,0.351339142772504,0.130979075497713,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0.538168907066586,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.337552664482532,0,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0.362578348774867,0,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.614014698904518,0,0.214840489736547,0.725083469571143,0.170453254832202,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0.427296284509893,0,0.980160863924127,0,0.144269212976445,0.213425530045242,0,0,0,0.423347165447766,0,0,0.912938716132769,0.313359791546046,2.50634477090067,0.169291777801603,0,0.201799707191048,1.70338495076131,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.293016358543788,0,0.222886768554957,0.568272293612826,0.23874448473769,0,0,0,0.422008249231538,0,0,0.63337622438398,0.19924798825107,0,0.503865495708552,0.102268682502155,0,0,0.359473404589307,0.716084698702437,0.511572370226872,0,0,0,0,0,0,0,0.349839999984783,0,0.682760689712998,0.508507300585533,0.236387681767936,0.344743373241465,2.33283690706603,0.173624994933292,0,0.120596438625408,0,1.3269511191747,0.886642856860642,0,0.653630781113941,0.139423744278603,0.0769502585037971,0.455768223388005,0.46112780877612,0.359030577639089,0.325942115766024,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0,0.392125068635479,0,0.569261198172555,0.158936578980379,0.632994193584081,0.326465616318295,0,0,0,0.442287822516696,0,0.296521128680622,0.247127877893006,0.522109747527277,0.134802265961354,0.802577647298789,0,0.547364367646998,0.19566461893209,0.485560759068186,0.789168805698781,0,0.30607276163049,0,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0.51595809741485,0.483781656445426,0.219267951258557,0.574808199372465,0,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0.189932387867636,0.195551382734803,0.400794101257669,0,0,0.144090417154106,0.343609788497747,0.686379991447858,0.14405479798815,1.24252535565433,0.235694034616795,0.407712618220842,0.418411385249333,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0.412079291905832,0.337017719270924,0.492137407573744,0.338693328263138,0,0,0.160753148465019,0,0,0.2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| |||
|short_description=p@chr5:32104819..32104823,- | |||
}} |
Latest revision as of 14:19, 30 July 2015
Short description: | p@chr5:32104819..32104823, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:32104819..32104823, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.33e-13 | 1 |
enteroendocrine cell | 3.33e-13 | 1 |
type D enteroendocrine cell | 3.33e-13 | 1 |
somatostatin secreting cell | 3.33e-13 | 1 |
pancreatic D cell | 3.33e-13 | 1 |
progenitor cell of endocrine pancreas | 3.33e-13 | 1 |
bone matrix secreting cell | 4.17e-07 | 2 |
osteocyte | 4.17e-07 | 2 |
osteoclast | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.76e-13 | 1 |
paranasal sinus | 3.76e-13 | 1 |
substantia nigra | 9.73e-13 | 1 |
midbrain nucleus | 9.73e-13 | 1 |
regional part of midbrain | 9.73e-13 | 1 |
midbrain | 9.73e-13 | 1 |
presumptive midbrain | 9.73e-13 | 1 |
midbrain neural tube | 9.73e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.33e-13 | 1 |
paranasal sinus cancer | 3.76e-13 | 1 |
maxillary sinus cancer | 3.76e-13 | 1 |
giant cell tumor | 4.17e-07 | 2 |
bone giant cell tumor | 4.17e-07 | 2 |