FFCP PHASE1:Hg19::chr5:180688079..180688104,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19024 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000514805_5end | |||
|cluster_id=chr5:180688079..180688104,- | |||
|description=CAGE_peak_2_at_TRIM52_5end | |||
|id=chr5:180688079..180688104,- | |||
|ontology_enrichment_celltype=CL:0000037!5.31e-30!172;CL:0000566!5.31e-30!172;CL:0002032!3.14e-27!165;CL:0000837!3.14e-27!165;CL:0000738!3.92e-27!140;CL:0000988!7.63e-27!182;CL:0002031!1.37e-25!124;CL:0000542!1.24e-24!53;CL:0000051!1.24e-24!53;CL:0000838!1.39e-24!52;CL:0002087!1.00e-23!119;CL:0000084!2.60e-14!25;CL:0000827!2.60e-14!25;CL:0000791!1.51e-12!18;CL:0000789!1.51e-12!18;CL:0002420!1.51e-12!18;CL:0002419!1.51e-12!18;CL:0000790!1.51e-12!18;CL:0000945!9.64e-10!24;CL:0000826!9.64e-10!24;CL:0000625!2.03e-08!11;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0000236!1.41e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.82e-15;53!CL:0000084;1.43e-14;25!CL:0000791;9.76e-13;18!CL:0000789;9.76e-13;18!CL:0002419;9.76e-13;18!CL:0000945;8.04e-10;24!CL:0002087;9.00e-09;104!CL:0000625;1.46e-08;11!CL:0000236;3.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.29e-30,168;CL:0000738,6.40e-28,136;CL:0002032,8.35e-28,161;CL:0000837,8.35e-28,161;CL:0000988,8.50e-28,177;CL:0002031,2.19e-26,120;CL:0000542,8.55e-25,53;CL:0000051,8.55e-25,53;CL:0000838,9.59e-25,52;CL:0002087,1.73e-24,115;CL:0000084,2.12e-14,25;CL:0000827,2.12e-14,25;CL:0000791,1.26e-12,18;CL:0000789,1.26e-12,18;CL:0002420,1.26e-12,18;CL:0002419,1.26e-12,18;CL:0000790,1.26e-12,18;CL:0000945,8.45e-10,24;CL:0000826,8.45e-10,24;CL:0000625,1.82e-08,11;CL:0000763,3.06e-08,108;CL:0000049,3.06e-08,108;CL:0000236,1.28e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.82e-15;53!CL:0000790;9.76e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-19!115;UBERON:0002390!3.32e-11!102;UBERON:0003061!3.32e-11!102;UBERON:0001049!1.63e-10!57;UBERON:0005068!1.63e-10!57;UBERON:0006241!1.63e-10!57;UBERON:0007135!1.63e-10!57;UBERON:0003080!1.16e-09!42;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0002193!1.64e-09!112;UBERON:0000955!1.52e-08!69;UBERON:0006238!1.52e-08!69;UBERON:0002020!2.07e-08!34;UBERON:0003528!2.07e-08!34;UBERON:0002616!4.23e-08!59;UBERON:0001893!6.15e-08!34;UBERON:0002791!1.03e-07!33;UBERON:0001869!1.24e-07!32;UBERON:0001017!1.33e-07!82;UBERON:0000178!2.91e-07!15;UBERON:0000179!2.91e-07!15;UBERON:0000463!2.91e-07!15;UBERON:0002619!5.14e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-07;15!UBERON:0000179;1.84e-07;15!UBERON:0000463;1.84e-07;15!UBERON:0002780;2.68e-07;41!UBERON:0001890;2.68e-07;41!UBERON:0003528;3.29e-07;34!UBERON:0002020;3.29e-07;34!UBERON:0002791;4.59e-07;32!UBERON:0002619;4.66e-07;22!UBERON:0001893;5.65e-07;34!UBERON:0001869;5.90e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.83e-19,114;UBERON:0002390,1.01e-11,98;UBERON:0003061,1.01e-11,98;UBERON:0001049,2.21e-10,56;UBERON:0005068,2.21e-10,56;UBERON:0006241,2.21e-10,56;UBERON:0007135,2.21e-10,56;UBERON:0000073,2.78e-10,53;UBERON:0002616,2.78e-10,53;UBERON:0002193,6.75e-10,108;UBERON:0002780,1.27e-09,41;UBERON:0001890,1.27e-09,41;UBERON:0003080,1.27e-09,41;UBERON:0006240,1.27e-09,41;UBERON:0003528,1.85e-08,34;UBERON:0002020,1.85e-08,34;UBERON:0000955,2.95e-08,68;UBERON:0006238,2.95e-08,68;UBERON:0001893,5.55e-08,34;UBERON:0002791,9.47e-08,32;UBERON:0001869,1.12e-07,32;UBERON:0000178,2.65e-07,15;UBERON:0000179,2.65e-07,15;UBERON:0000463,2.65e-07,15;UBERON:0001017,2.79e-07,81;UBERON:0002619,4.71e-07,22;UBERON:0001016,6.27e-07,89 | |||
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| |||
|short_description=p2@TRIM52 | |||
}} |
Latest revision as of 12:09, 17 September 2015
Short description: | p2@TRIM52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM52_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514805_5end |
EntrezGene: | TRIM52 |
HGNC: | 19024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.29e-30 | 168 |
leukocyte | 6.40e-28 | 136 |
hematopoietic oligopotent progenitor cell | 8.35e-28 | 161 |
hematopoietic multipotent progenitor cell | 8.35e-28 | 161 |
hematopoietic cell | 8.50e-28 | 177 |
hematopoietic lineage restricted progenitor cell | 2.19e-26 | 120 |
lymphocyte | 8.55e-25 | 53 |
common lymphoid progenitor | 8.55e-25 | 53 |
lymphoid lineage restricted progenitor cell | 9.59e-25 | 52 |
nongranular leukocyte | 1.73e-24 | 115 |
T cell | 2.12e-14 | 25 |
pro-T cell | 2.12e-14 | 25 |
mature alpha-beta T cell | 1.26e-12 | 18 |
alpha-beta T cell | 1.26e-12 | 18 |
immature T cell | 1.26e-12 | 18 |
mature T cell | 1.26e-12 | 18 |
immature alpha-beta T cell | 1.26e-12 | 18 |
lymphocyte of B lineage | 8.45e-10 | 24 |
pro-B cell | 8.45e-10 | 24 |
CD8-positive, alpha-beta T cell | 1.82e-08 | 11 |
myeloid cell | 3.06e-08 | 108 |
common myeloid progenitor | 3.06e-08 | 108 |
B cell | 1.28e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.83e-19 | 114 |
hematopoietic system | 1.01e-11 | 98 |
blood island | 1.01e-11 | 98 |
neural tube | 2.21e-10 | 56 |
neural rod | 2.21e-10 | 56 |
future spinal cord | 2.21e-10 | 56 |
neural keel | 2.21e-10 | 56 |
regional part of nervous system | 2.78e-10 | 53 |
regional part of brain | 2.78e-10 | 53 |
hemolymphoid system | 6.75e-10 | 108 |
regional part of forebrain | 1.27e-09 | 41 |
forebrain | 1.27e-09 | 41 |
anterior neural tube | 1.27e-09 | 41 |
future forebrain | 1.27e-09 | 41 |
brain grey matter | 1.85e-08 | 34 |
gray matter | 1.85e-08 | 34 |
brain | 2.95e-08 | 68 |
future brain | 2.95e-08 | 68 |
telencephalon | 5.55e-08 | 34 |
regional part of telencephalon | 9.47e-08 | 32 |
cerebral hemisphere | 1.12e-07 | 32 |
blood | 2.65e-07 | 15 |
haemolymphatic fluid | 2.65e-07 | 15 |
organism substance | 2.65e-07 | 15 |
central nervous system | 2.79e-07 | 81 |
regional part of cerebral cortex | 4.71e-07 | 22 |
nervous system | 6.27e-07 | 89 |