FFCP PHASE1:Hg19::chrX:1710484..1710537,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:1710484..1710537,+
|short_description=p1@AKAP17A
|description=CAGE_peak_1_at_AKAP17A_5end
|association_with_transcript=0bp_to_ENST00000313871,ENST000003812...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8227 | |EntrezGene=8227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18783 | |HGNC=18783 | ||
|TSSclassifier=strong | |||
|UniProt=Q02040,Q05DA9 | |UniProt=Q02040,Q05DA9 | ||
|association_with_transcript=0bp_to_ENST00000313871,ENST00000381261,ENST00000474361,NM_005088,NR_027383,uc004cqa.2,uc004cqb.2,uc010ncx.1_5end | |||
|cluster_id=chrX:1710484..1710537,+ | |||
|coexpression_cluster_id=C4865 | |||
|description=CAGE_peak_1_at_AKAP17A_5end | |||
|id=chrX:1710484..1710537,+ | |||
|ontology_enrichment_celltype=CL:0000163!6.94e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000163;8.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000163,6.94e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!2.83e-11!41;UBERON:0003134!5.50e-10!37;UBERON:0000474!5.50e-10!37;UBERON:0001049!7.85e-08!57;UBERON:0005068!7.85e-08!57;UBERON:0006241!7.85e-08!57;UBERON:0007135!7.85e-08!57;UBERON:0003975!4.60e-07!22;UBERON:0005795!7.04e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003134;4.68e-09;33!UBERON:0003100;1.27e-08;41!UBERON:0000474;2.77e-08;37!UBERON:0003975;3.87e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,2.83e-11,41;UBERON:0003134,5.50e-10,37;UBERON:0000474,5.50e-10,37;UBERON:0001049,1.97e-07,56;UBERON:0005068,1.97e-07,56;UBERON:0006241,1.97e-07,56;UBERON:0007135,1.97e-07,56;UBERON:0003975,4.60e-07,22;UBERON:0005795,7.04e-07,22 | |||
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| ||
|short_description=p1@AKAP17A | |||
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Latest revision as of 06:41, 20 September 2015
Short description: | p1@AKAP17A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKAP17A_5end |
Coexpression cluster: | C4865_Mast_Neutrophils_Dendritic_lymphoma_CD14_CD4_tridermal |
Association with transcript: | 0bp_to_ENST00000313871, ENST00000381261, ENST00000474361, NM_005088, NR_027383, uc004cqa.2, uc004cqb.2, uc010ncx.1_5end |
EntrezGene: | AKAP17A |
HGNC: | 18783 |
UniProt: | Q02040Q05DA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine cell | 6.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female organism | 2.83e-11 | 41 |
female reproductive organ | 5.50e-10 | 37 |
female reproductive system | 5.50e-10 | 37 |
neural tube | 1.97e-07 | 56 |
neural rod | 1.97e-07 | 56 |
future spinal cord | 1.97e-07 | 56 |
neural keel | 1.97e-07 | 56 |
internal female genitalia | 4.60e-07 | 22 |
embryonic uterus | 7.04e-07 | 22 |