FFCP PHASE1:Hg19::chr5:162932571..162932661,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6905 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJR3,Q9NZL9 | |||
|association_with_transcript=0bp_to_ENST00000421814,ENST00000518095,ENST00000520449,ENST00000523606,NM_013283,uc003lzk.2,uc003lzl.1_5end | |||
|cluster_id=chr5:162932571..162932661,+ | |||
|coexpression_cluster_id=C909 | |||
|description=CAGE_peak_1_at_MAT2B_5end | |||
|id=chr5:162932571..162932661,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.13e-12!140;CL:0000838!3.05e-11!52;CL:0002031!3.93e-11!124;CL:0000542!9.94e-11!53;CL:0000051!9.94e-11!53;CL:0002087!2.52e-10!119;CL:0002032!6.50e-08!165;CL:0000837!6.50e-08!165;CL:0000037!7.20e-08!172;CL:0000566!7.20e-08!172;CL:0000791!2.66e-07!18;CL:0000789!2.66e-07!18;CL:0002420!2.66e-07!18;CL:0002419!2.66e-07!18;CL:0000790!2.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.91e-07;18!CL:0000789;2.91e-07;18!CL:0002419;2.91e-07;18!CL:0000542;7.05e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.66e-13,136;CL:0002031,1.63e-11,120;CL:0000838,3.05e-11,52;CL:0000542,9.94e-11,53;CL:0000051,9.94e-11,53;CL:0002087,1.07e-10,115;CL:0002032,4.02e-08,161;CL:0000837,4.02e-08,161;CL:0000037,4.55e-08,168;CL:0000791,2.66e-07,18;CL:0000789,2.66e-07,18;CL:0002420,2.66e-07,18;CL:0002419,2.66e-07,18;CL:0000790,2.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.91e-07;18!CL:0000051;7.05e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-12!115;UBERON:0002193!1.59e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.71e-12,114;UBERON:0002193,8.20e-08,108 | |||
|phase1_expression=40.6959569566047,32.1150785836475,42.7091844410793,37.0271203906583,29.9463933266283,32.2765253917136,17.7309914717817,30.9542737979147,23.7678921661853,30.7167420626886,4.18680700783456,40.630095216212,31.388270409186,35.2734105936133,18.5582530407633,44.3734596658172,40.3805333776065,32.1336439770444,36.1070271104975,20.8074588149772,15.300051843319,13.7920077450359,51.5224776835902,34.9029783935855,45.823063452103,38.9708369314551,42.0355017983722,38.3321504997618,55.4643630356955,48.3625041602488,37.6203179658065,26.6632155098889,19.8795906393645,20.3364705591733,45.4732467406371,30.7085542172831,46.9760702935756,42.1036510484227,25.469144828708,32.1176088659461,55.5310376115012,71.9043938562135,60.2726828263997,66.8831898385998,54.7920118348774,58.7053428074515,34.3994974620413,32.8934310417461,32.2094625730908,37.1123186095574,27.1530348920847,40.9114257707252,32.0613483085055,22.5919639254339,24.3767675869815,43.6722227738843,36.8423302578092,49.4391665779186,31.526640914203,25.6743221660875,33.8848676673492,71.2478808403307,47.0734231987051,61.376364076708,33.3740624422872,24.397564661719,38.6149794377257,38.6922944495385,20.8593167368081,37.3564812892801,38.7455681685356,30.5670437869679,45.5705837914874,79.643242939602,73.9862963878352,86.3793619494509,54.8163719994896,63.2244718862742,60.9149973581934,82.9387084287033,96.8724217959569,101.926597800666,193.595868907455,178.587325882717,203.697619134754,148.502117453145,189.78769785507,173.000484426299,196.330327217104,206.075610979639,46.6754634669748,34.6469941728854,25.6123062843903,35.686258716337,35.3120394678368,50.8331283615899,42.8827298848156,37.7290332239198,59.6244347098577,113.35244387488,108.858037055619,131.618489994256,81.8272259313228,113.081613738451,127.564357936605,134.914141801425,138.380774383923,71.6030477266524,75.4344215847294,65.4462860322631,55.2700035571697,80.5652578343446,89.2685110235604,90.428799894323,58.539893330787,87.8147405906138,95.8051234004803,114.084311900233,134.859495846395,156.734183847456,162.770863464105,163.47775164512,145.907290386362,162.542996166111,142.421028269674,153.431659324523,160.119959399604,41.5309891042949,29.6858617319693,40.6956574910665,39.0090986102339,38.9006498628109,40.020981857025,29.6380104955344,43.6163982253224,41.5709509417564,32.6067238290951,33.5778060508819,36.6795090596583,32.3724920295343,34.6947403487848,48.0693207076605,23.6791937390152,24.4717732237723,75.9440901151959,71.5673220299988,59.5651663124516,35.5351030214959,37.7516641114884,34.9170051249791,56.2497612847775,37.8503221846695,41.6568601929113,55.4001783085529,31.8819571519528,41.5428243329502,51.4127617680554,89.6706154317571,70.0859537492819,78.9940646124622,49.5480060044251,76.0272105718513,50.5208459124711,59.9290820963766,38.8868134983245,59.2057198523449,51.6417557040191,54.503956553928,22.9974956198825,40.8184233614295,47.6324534219059,129.144809087342,108.578473961531,31.3987717542625,52.6790268797038,49.0060080141924,24.0984709080058,22.3732564184075,37.9495168952242,24.1091368061192,20.2823091886439,20.9667416154586,35.1668470001736,39.6049375884883,37.9231615223224,32.5418469436603,29.3849721484799,27.8842503882218,25.9092863769166,43.3558584373781,36.0171320129841,32.8816596202542,29.9464947081043,27.8092597270452,27.1525047769008,31.3227509145008,30.0678023221477,41.5801000048719,32.1447008062124,37.3166158394591,20.8399261126709,43.4307174001491,28.6521410506798,31.862373280681,29.4115005990161,26.6644382345147,37.1088005499294,44.8057123482083,18.8359117473305,57.2333802033761,47.6846777609014,20.4061945337394,50.7018443853119,23.1876486041066,45.4125129449079,18.5653965465393,45.8928294309246,16.1557615516233,50.9956438478338,71.1242650002772,13.1353549231147,40.603095585739,42.2205874853114,51.9871695009268,45.2758560180785,53.3456547423547,23.9068464014007,25.0481262127607,24.9816977169465,24.1530258185813,20.1856680700503,19.7087773900948,34.4188971125595,25.0863965895225,37.2964287651697,37.1494342425583,24.5439023767659,34.7821992117141,35.9085389866357,33.2595221239205,32.0955460651266,33.3355549461381,32.9806160564424,38.0224289011664,35.5160851876876,37.3204742237999,30.2643736396106,15.426595118379,29.6333288158608,26.4615680493976,34.2238594018943,19.6565443335525,40.1737136543355,22.9560811695618,40.8321615963137,37.4017826450786,20.6330536568216,26.9764207818287,39.9100020474174,38.7945585214239,22.8065813717227,10.3993478527958,27.4229549848019,44.8650667253547,41.6800864537167,76.9473166566523,81.4854502134835,85.6143685055692,26.0767451326561,22.3206402144667,46.2887971444307,48.4388828838222,32.9961180280977,39.3682102744463,44.1792997163001,44.6591556313517,61.8849391876682,42.7231889615524,29.9038489748865,34.979089890612,70.2626503425544,48.9294352676222,45.2536653729259,45.5735184669232,33.3998923976809,16.8074907245642,23.4434894420094,10.2643467613623,24.3701157706877,23.1264154539816,21.4369824472934,28.1449021706855,30.5172048183296,32.268845761218,39.81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| |||
|short_description=p1@MAT2B | |||
}} |
Latest revision as of 18:09, 16 September 2015
Short description: | p1@MAT2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAT2B_5end |
Coexpression cluster: | C909_Whole_CD19_CD8_Neutrophils_Eosinophils_CD4_blood |
Association with transcript: | 0bp_to_ENST00000421814, ENST00000518095, ENST00000520449, ENST00000523606, NM_013283, uc003lzk.2, uc003lzl.1_5end |
EntrezGene: | MAT2B |
HGNC: | 6905 |
UniProt: | E5RJR3Q9NZL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.66e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 1.63e-11 | 120 |
lymphoid lineage restricted progenitor cell | 3.05e-11 | 52 |
lymphocyte | 9.94e-11 | 53 |
common lymphoid progenitor | 9.94e-11 | 53 |
nongranular leukocyte | 1.07e-10 | 115 |
hematopoietic oligopotent progenitor cell | 4.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.02e-08 | 161 |
hematopoietic stem cell | 4.55e-08 | 168 |
mature alpha-beta T cell | 2.66e-07 | 18 |
alpha-beta T cell | 2.66e-07 | 18 |
immature T cell | 2.66e-07 | 18 |
mature T cell | 2.66e-07 | 18 |
immature alpha-beta T cell | 2.66e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.71e-12 | 114 |
hemolymphoid system | 8.20e-08 | 108 |