FFCP PHASE1:Hg19::chrX:153764147..153764152,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:153764147..153764152,-
|short_description=p@chrX:153764147..153764152,-
|description=CAGE_peak_at_chrX:153764147..153764152,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:153764147..153764152,- | |||
|description=CAGE_peak_at_chrX:153764147..153764152,- | |||
|id=chrX:153764147..153764152,- | |||
|ontology_enrichment_celltype=CL:0000548!5.06e-11!679;CL:0000004!5.06e-11!679;CL:0000255!5.06e-11!679;CL:0000012!9.96e-11!682;CL:0000003!4.12e-07!722;CL:0000183!5.28e-07!59;CL:0000393!5.67e-07!60;CL:0000211!5.67e-07!60;CL:0000066!7.20e-07!254;CL:0000144!8.15e-07!625;CL:0002371!9.67e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002553;5.37e-13;1!CL:1000449;1.47e-07;15!CL:0002262;2.43e-07;2!CL:1000398;2.43e-07;2!CL:0002195;3.92e-07;2!CL:0002571;3.92e-07;2!CL:0002596;3.92e-07;2!CL:0002593;3.92e-07;2!CL:0002367;3.92e-07;2!CL:0002570;7.22e-07;8!CL:1000497;9.97e-07;17!CL:0002518;9.97e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.62e-13,1;CL:1000449,1.50e-07,15;CL:0002262,2.43e-07,2;CL:1000398,2.43e-07,2;CL:0002596,2.91e-07,2;CL:0002195,4.42e-07,2;CL:0002571,4.42e-07,2;CL:0002593,4.98e-07,2;CL:0002367,5.28e-07,2;CL:0002570,7.44e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.42e-09!143;UBERON:0000490!4.96e-09!138;UBERON:0002100!8.56e-08!216;UBERON:0003104!3.81e-07!238;UBERON:0009142!3.81e-07!238;UBERON:0006554!9.64e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.06e-07;7!UBERON:0000353;1.22e-07;15!UBERON:0006555;1.47e-07;15!UBERON:0004819;1.47e-07;15!UBERON:0001285;1.47e-07;15!UBERON:0007684;1.47e-07;15!UBERON:0001281;2.43e-07;2!UBERON:0003497;2.43e-07;2!UBERON:0003909;2.43e-07;2!UBERON:0003835;2.43e-07;2!UBERON:0005969;3.92e-07;2!UBERON:0002456;3.92e-07;2!UBERON:0005396;3.92e-07;2!UBERON:0003956;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,1.21e-07,7;UBERON:0000353,1.37e-07,15;UBERON:0004211,1.50e-07,15;UBERON:0009773,1.50e-07,15;UBERON:0001231,1.50e-07,15;UBERON:0001285,1.50e-07,15;UBERON:0007684,1.50e-07,15;UBERON:0004208,1.50e-07,15;UBERON:0001281,2.43e-07,2;UBERON:0003497,2.43e-07,2;UBERON:0003909,2.43e-07,2;UBERON:0003835,2.43e-07,2;UBERON:0005396,2.91e-07,2;UBERON:0006555,4.15e-07,16;UBERON:0004819,4.15e-07,16;UBERON:0002456,4.98e-07,2;UBERON:0005969,5.28e-07,2;UBERON:0003956,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.327447688744282,0.728590576585084,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0,0,0.702254033511242,0,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0.927443239800615,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0.783204629850962,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,1.56869953835371,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,1.01950509218015,0,0,0,0.261435451024901,0.512900250232778,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0,0.354761064070598,0,0,0,1.04980416073495,0.192444225451024,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0.318852545457645,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.369254416383208,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0.335643173951685,0.189753732724185,0,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0,0,0.123563938946503,0.313265848516366,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0.290268993867255,0.292357268344742,0.0821154570532092,0,0,0,0,0,0,0.782205530939212,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.313808538937,1.52997326454483,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.295282444544246,0.0846733320657845,0,0,0,0.412618309791701,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0,0,0.855434189421647,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,1.10961172300523,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0.39997479170986,0.213383459388282,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,1.60114149657094,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06374456795571,0.333694205676207,0,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0.95553893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| ||
|short_description=p@chrX:153764147..153764152,- | |||
}} | }} |
Latest revision as of 07:06, 1 August 2015
Short description: | p@chrX:153764147..153764152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:153764147..153764152, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.62e-13 | 1 |
epithelial cell of nephron | 1.50e-07 | 15 |
endothelial cell of sinusoid | 2.43e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.43e-07 | 2 |
smooth muscle cell of the carotid artery | 2.91e-07 | 2 |
hepatic stem cell | 4.42e-07 | 2 |
hepatic mesenchymal stem cell | 4.42e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 4.98e-07 | 2 |
trabecular meshwork cell | 5.28e-07 | 2 |
mesenchymal stem cell of adipose | 7.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 1.21e-07 | 7 |
parenchyma | 1.37e-07 | 15 |
nephron epithelium | 1.50e-07 | 15 |
renal tubule | 1.50e-07 | 15 |
nephron tubule | 1.50e-07 | 15 |
nephron | 1.50e-07 | 15 |
uriniferous tubule | 1.50e-07 | 15 |
nephrogenic mesenchyme | 1.50e-07 | 15 |
hepatic sinusoid | 2.43e-07 | 2 |
abdomen blood vessel | 2.43e-07 | 2 |
sinusoid | 2.43e-07 | 2 |
abdominal segment blood vessel | 2.43e-07 | 2 |
carotid artery segment | 2.91e-07 | 2 |
excretory tube | 4.15e-07 | 16 |
kidney epithelium | 4.15e-07 | 16 |
internal thoracic artery | 4.98e-07 | 2 |
reticulum trabeculare | 5.28e-07 | 2 |
aqueous drainage system | 5.28e-07 | 2 |