FFCP PHASE1:Hg19::chr5:150632645..150632658,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |||
|TSSclassifier=strong | |||
|UniProt=P17900 | |||
|association_with_transcript=32bp_to_NM_000405,NM_001167607,uc003ltr.3,uc011dcr.1,uc011dcs.1_5end | |||
|cluster_id=chr5:150632645..150632658,+ | |||
|coexpression_cluster_id=C2815 | |||
|description=CAGE_peak_5_at_GM2A_5end | |||
|id=chr5:150632645..150632658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.92e-17!86;UBERON:0007284!7.92e-17!86;UBERON:0001049!3.56e-16!57;UBERON:0005068!3.56e-16!57;UBERON:0006241!3.56e-16!57;UBERON:0007135!3.56e-16!57;UBERON:0002346!1.17e-15!90;UBERON:0005743!5.57e-15!86;UBERON:0001017!4.65e-14!82;UBERON:0002616!6.54e-14!59;UBERON:0007023!3.19e-13!115;UBERON:0004121!4.46e-13!169;UBERON:0000033!6.36e-13!123;UBERON:0000073!8.38e-13!94;UBERON:0001016!8.38e-13!94;UBERON:0000955!1.68e-12!69;UBERON:0006238!1.68e-12!69;UBERON:0000924!1.72e-12!173;UBERON:0006601!1.72e-12!173;UBERON:0000153!2.54e-12!129;UBERON:0007811!2.54e-12!129;UBERON:0002780!2.69e-11!41;UBERON:0001890!2.69e-11!41;UBERON:0006240!2.69e-11!41;UBERON:0003056!4.23e-11!61;UBERON:0001893!9.28e-11!34;UBERON:0002020!1.50e-10!34;UBERON:0003528!1.50e-10!34;UBERON:0003080!2.23e-10!42;UBERON:0002791!2.81e-10!33;UBERON:0001869!1.19e-09!32;UBERON:0003076!1.88e-07!15;UBERON:0003057!1.88e-07!15;UBERON:0000062!3.91e-07!511;UBERON:0000064!4.20e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.94e-10;34!UBERON:0003528;8.99e-10;34!UBERON:0002020;8.99e-10;34!UBERON:0000073;9.30e-10;53!UBERON:0002616;9.30e-10;53!UBERON:0002791;1.27e-09;32!UBERON:0001869;2.01e-09;32!UBERON:0002780;7.64e-09;41!UBERON:0001890;7.64e-09;41!UBERON:0000956;2.88e-07;25!UBERON:0000203;2.88e-07;25!UBERON:0001017;4.58e-07;75!UBERON:0002619;7.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.50e-19,82;UBERON:0007284,3.50e-19,82;UBERON:0010371,4.95e-19,104;UBERON:0001049,3.35e-18,56;UBERON:0005068,3.35e-18,56;UBERON:0006241,3.35e-18,56;UBERON:0007135,3.35e-18,56;UBERON:0002346,7.33e-18,86;UBERON:0000073,2.31e-16,53;UBERON:0002616,2.31e-16,53;UBERON:0001017,2.22e-15,81;UBERON:0004121,2.33e-14,171;UBERON:0000924,2.33e-14,171;UBERON:0006601,2.33e-14,171;UBERON:0000955,5.70e-14,68;UBERON:0006238,5.70e-14,68;UBERON:0007023,1.29e-13,114;UBERON:0003056,2.20e-13,61;UBERON:0001016,4.27e-13,89;UBERON:0002780,5.76e-12,41;UBERON:0001890,5.76e-12,41;UBERON:0003080,5.76e-12,41;UBERON:0006240,5.76e-12,41;UBERON:0001893,1.60e-11,34;UBERON:0003528,2.67e-11,34;UBERON:0002020,2.67e-11,34;UBERON:0010314,6.43e-11,132;UBERON:0002791,2.18e-10,32;UBERON:0001869,2.39e-10,32;UBERON:0003076,9.16e-08,15;UBERON:0003057,9.16e-08,15;UBERON:0000956,3.59e-07,25;UBERON:0000203,3.59e-07,25;UBERON:0002619,8.07e-07,22 | |||
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| |||
|short_description=p5@GM2A | |||
}} |
Latest revision as of 08:33, 16 September 2015
Short description: | p5@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GM2A_5end |
Coexpression cluster: | C2815_Monocytederived_CD14_Mast_corpus_Macrophage_Dendritic_optic |
Association with transcript: | 32bp_to_NM_000405, NM_001167607, uc003ltr.3, uc011dcr.1, uc011dcs.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | P17900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data