FFCP PHASE1:Hg19::chr5:149782735..149782776,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1697 | |||
|TSSclassifier=strong | |||
|UniProt=O78208 | |||
|association_with_transcript=98bp_to_M28590_5end | |||
|cluster_id=chr5:149782735..149782776,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_4_at_CD74_5end | |||
|id=chr5:149782735..149782776,- | |||
|ontology_enrichment_celltype=CL:0000738!7.19e-50!140;CL:0002087!6.09e-48!119;CL:0002031!1.44e-43!124;CL:0002009!4.52e-41!65;CL:0002194!5.38e-39!63;CL:0000576!5.38e-39!63;CL:0000040!5.38e-39!63;CL:0000559!5.38e-39!63;CL:0000037!5.15e-38!172;CL:0000566!5.15e-38!172;CL:0002032!5.32e-37!165;CL:0000837!5.32e-37!165;CL:0000557!1.31e-36!71;CL:0000766!2.80e-36!76;CL:0002057!5.21e-36!42;CL:0000988!2.07e-35!182;CL:0000839!8.66e-34!70;CL:0000860!2.48e-32!45;CL:0000763!3.04e-26!112;CL:0000049!3.04e-26!112;CL:0000990!2.39e-10!8;CL:0000542!9.40e-10!53;CL:0000051!9.40e-10!53;CL:0000838!1.92e-09!52;CL:0000945!1.42e-08!24;CL:0000826!1.42e-08!24;CL:0000451!7.53e-08!10;CL:0002393!2.08e-07!9;CL:0002397!2.08e-07!9;CL:0000840!2.96e-07!5;CL:0001029!2.96e-07!5;CL:0000453!9.17e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.19e-48;33!CL:0002057;4.19e-48;33!CL:0000473;9.90e-48;39!CL:0000234;9.90e-48;39!CL:0000576;2.31e-36;48!CL:0000766;1.23e-25;69!CL:0000990;1.60e-17;8!CL:0000738;2.37e-15;136!CL:0000451;6.76e-14;10!CL:0002087;8.85e-14;104!CL:0000840;5.99e-12;5!CL:0000763;1.62e-11;100!CL:0000453;5.84e-11;5!CL:0000235;9.56e-11;6!CL:0000988;1.91e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.71e-73,61;CL:0002194,1.74e-69,59;CL:0000576,1.74e-69,59;CL:0000040,1.74e-69,59;CL:0000559,1.74e-69,59;CL:0000473,1.61e-65,48;CL:0000234,1.61e-65,48;CL:0000557,3.06e-65,67;CL:0000766,1.71e-63,72;CL:0000839,2.03e-60,66;CL:0000860,7.61e-56,42;CL:0002057,7.61e-56,42;CL:0000738,5.95e-55,136;CL:0002087,8.14e-50,115;CL:0000763,2.06e-46,108;CL:0000049,2.06e-46,108;CL:0002031,5.11e-46,120;CL:0000037,2.61e-40,168;CL:0002032,5.91e-39,161;CL:0000837,5.91e-39,161;CL:0000988,3.72e-37,177;CL:0000990,2.09e-17,8;CL:0000451,8.35e-14,10;CL:0000840,7.73e-12,5;CL:0001029,7.73e-12,5;CL:0000453,5.86e-11,5;CL:0000235,8.07e-11,6;CL:0000134,4.96e-10,354;CL:0002320,1.80e-09,361;CL:0000219,1.53e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-39;42!CL:0000049;4.93e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-38!102;UBERON:0003061!2.10e-38!102;UBERON:0007023!1.31e-35!115;UBERON:0002193!1.69e-35!112;UBERON:0002371!6.33e-33!80;UBERON:0001474!7.11e-29!86;UBERON:0002405!6.92e-28!115;UBERON:0004765!6.25e-22!101;UBERON:0001434!6.25e-22!101;UBERON:0001049!1.63e-09!57;UBERON:0005068!1.63e-09!57;UBERON:0006241!1.63e-09!57;UBERON:0007135!1.63e-09!57;UBERON:0003081!5.43e-09!216;UBERON:0002204!2.81e-08!167;UBERON:0002616!8.43e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-55,76;UBERON:0002390,2.28e-51,98;UBERON:0003061,2.28e-51,98;UBERON:0001474,3.04e-50,82;UBERON:0002405,8.29e-48,93;UBERON:0002193,7.56e-47,108;UBERON:0004765,2.75e-44,90;UBERON:0001434,3.43e-38,100;UBERON:0003081,3.47e-21,203;UBERON:0002204,6.78e-20,167;UBERON:0000926,5.97e-11,315;UBERON:0004120,5.97e-11,315;UBERON:0006603,5.97e-11,315;UBERON:0002384,1.02e-08,371;UBERON:0007023,5.03e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,1.75750833220288,1.47781061009902,1.25937250101887,0.393364276848904,1.15148819429164,1.08371286321253,0,0,0,0.46480320348181,0,0.587200878669695,1.66198622559563,1.80490002723128,2.38711957787437,2.01523926815932,3.88672399222775,4.63636021741536,3.78035420826868,6.42389104270976,2.66842467306598,3.95129362739664,5.75635043230556,2.78735733805593,2.8769239232215,4.09857130446561,2.60130452877444,2.41321976515633,3.22742341791913,1.35426486594342,4.70605848856512,5.18521685109907,1.34834090667051,2.75475503133812,4.49300637906531,4.47535988059329,2.63881040149373,6.18337338627059,3.40979800426155,4.06292934080018,5.10646702222026,2.4912889959823,3.26623264833766,4.69334626578181,5.2125322729228,5.44859552370032,2.94622108790052,2.53169909952708,2.32380814943136,1.91343869968539,0.838634582033504,1.79725809834392,2.25265339262259,1.6072558669708,0.855038231223746,1.59133341759272,0.91332076882317,0,2.73069305631066,2.66852776159066,0.853460445133014,0.800791974072025,1.14950487990897,0,0.954053754535364,6.83055562931338,2.93618594685469,1.52909291250092,0,1.12101712596307,0.263384084775077,0.196709770113833,0.786021525498329,0.616804496998528,0,0.32592226663359,0,0,1.33692548262208,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0.637130828648193,0,0,0,0.511946444617674,0,0,0,0,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,7.46459005405772,7.83583817846703,15.0242495386318,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,2.36315962672562,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,1.96973604869918,1.40402559083543,4.16167254408439,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,1.49801404789436,8.97484377612075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,1.70894156152249,1.19115887728894,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0.73254089635947,0,5.01495229248653,0,0.23874448473769,0,0,1.9882952955326,0.844016498463076,0,0.329607748453519,0,2.98871982376605,2.76283915531148,0,0,0.984678443688556,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0.74214478529481,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0.494255755786011,0.522109747527277,0.606610196826093,1.60515529459758,1.40558667435203,0,0,0,0.789168805698781,0,0,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.678923115418936,0,0,0,0,0.316553979779393,0,0.0801588202515337,2.13452994739353,0,0,0,0,0.432164393964449,0,0.471388069233591,0,0,0,0,1.80126086612937,0.136905378891993,0,0,0.262887354279314,0.837847203816763,0.229160424011684,0,0.199679000498991,1.28767814440971,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0.272406812223151,0,0.137539436597234,0,11.698642360678,13.9284351820431,0.425246896606173,0,1.97014268247995,0.262272940674991,0,0,0,5.71756261098694,0,0,0,0.864221491201268,0,0,0,0,0,0.732761168390412,0,0.775697738169303,0.66116300871345,0,0,2.88326013932776,0.78602152549833,7.87054205159671,3.96932817449561,0,1.94868157409433,0,0,0,0,0,0,0,0,0.500763722825999,1.72022758707021,1.44207766997908,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,29.4239066347477,15.8109159972902,11.2860122036533,0,0,0,0.999936979274649,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.798169295285756,0.615349092722265,0,0.207471757392654,0.807378228159255,0,0,0,0,0,0,0,0,0.902523940191087,0,2.34454203369928,0,0,0,0.270150338473579,1.56215619722769,0.413373593002368,0.126831620387814,0,0,3.47347824872506,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0.921871900446234,0.342976018874837,0.4757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| |||
|short_description=p4@CD74 | |||
}} |
Latest revision as of 04:30, 16 September 2015
Short description: | p4@CD74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD74_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 98bp_to_M28590_5end |
EntrezGene: | CD74 |
HGNC: | 1697 |
UniProt: | O78208 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-55 | 76 |
hematopoietic system | 2.28e-51 | 98 |
blood island | 2.28e-51 | 98 |
bone element | 3.04e-50 | 82 |
immune system | 8.29e-48 | 93 |
hemolymphoid system | 7.56e-47 | 108 |
skeletal element | 2.75e-44 | 90 |
skeletal system | 3.43e-38 | 100 |
lateral plate mesoderm | 3.47e-21 | 203 |
musculoskeletal system | 6.78e-20 | 167 |
mesoderm | 5.97e-11 | 315 |
mesoderm-derived structure | 5.97e-11 | 315 |
presumptive mesoderm | 5.97e-11 | 315 |
connective tissue | 1.02e-08 | 371 |
adult organism | 5.03e-08 | 114 |