FFCP PHASE1:Mm9::chr17:31194649..31194658,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11307|HGNC=|MCL_coexpression_id=2202|UniProt=Q64343|association_with_transcript=6bp_to_ENSMUST00000024829_5end|description=CAGE_peak_4_at_Abcg1_5end|id=chr17:31194649..31194658,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.55e-12!86;UBERON:0000033!7.34e-11!63;UBERON:0000955!1.90e-10!50;UBERON:0006238!1.90e-10!50;UBERON:0001049!2.12e-10!52;UBERON:0005068!2.12e-10!52;UBERON:0006241!2.12e-10!52;UBERON:0007135!2.12e-10!52;UBERON:0002616!3.31e-10!49;UBERON:0000153!9.59e-10!94;UBERON:0003080!4.06e-08!40;UBERON:0001017!4.64e-08!73;UBERON:0005743!4.64e-08!73;UBERON:0003056!6.03e-08!49;UBERON:0002780!1.35e-07!39;UBERON:0001890!1.35e-07!39;UBERON:0006240!1.35e-07!39;UBERON:0000073!1.54e-07!75;UBERON:0001016!1.54e-07!75;UBERON:0000477!1.75e-07!154;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0004121!7.34e-07!102;UBERON:0000924!7.34e-07!102;UBERON:0006601!7.34e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-15,54;UBERON:0001049,1.94e-13,52;UBERON:0005068,1.94e-13,52;UBERON:0006241,1.94e-13,52;UBERON:0007135,1.94e-13,52;UBERON:0001017,1.11e-11,73;UBERON:0002346,1.15e-11,64;UBERON:0003075,1.15e-11,64;UBERON:0007284,1.15e-11,64;UBERON:0000955,2.04e-11,47;UBERON:0006238,2.04e-11,47;UBERON:0002616,4.26e-11,46;UBERON:0001016,5.95e-11,75;UBERON:0010371,7.37e-11,73;UBERON:0004121,1.39e-10,95;UBERON:0000924,1.39e-10,95;UBERON:0006601,1.39e-10,95;UBERON:0003080,9.84e-10,40;UBERON:0003056,2.62e-09,49;UBERON:0002780,4.82e-09,39;UBERON:0001890,4.82e-09,39;UBERON:0006240,4.82e-09,39;UBERON:0002020,4.73e-07,34|phase1_expression=1.44133962394315,0,0,0.30246421130683,0,0.503637815735669,0.467225281191051,2.7115897922731,0.985521055061667,0.936258105287974,0,0,2.9104124088305,4.02133851127388,0.999329285446988,0.809901069559304,0,3.15462165358238,1.7824876368746,2.12194825899015,1.36069264241712,1.88652807281682,2.35079810225042,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0,4.18531630736908,0.7813353445238,1.57057123192139,2.94115744015507,3.41522742479223,2.42755176515577,0,0,0,0,0.218025156380447,0,0,0,0,2.85230430298152,2.90144856804538,2.35265659399725,0,0.85960031981627,0,0.809265843438391,1.05798195854407,0.633831403506179,0.338844532069132,0,6.29929802096979,4.94433181283487,7.104801149461,4.19440154725767,3.07374644257244,0.311068836925433,0.135005938331691,0.630974884054146,3.42781181284564,1.98781686856452,1.22490799214954,0.479227355091182,0.919218786610021,6.60695285996332,4.21368215681119,3.37934373163736,1.31886287730194,1.73826522844578,0.52091337055676,2.51264699101243,3.93933827022176,4.12555268997387,1.76777151284201,1.13897344639282,1.3047961207771,0.530083353332288,0.0755715601067855,3.18850937571846,1.72084775396277,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,2.84831672011889,1.48442139064825,0.173485326766136,0.304465478312141,1.15307748628029,0,0.587943535678524,0.376999773989026,2.71914464507811,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,0,0,5.27005434620785,6.0739544975902,0.510914110417183,2.27648736561249,0.599902730993408,2.1601938602421,5.54225365797844,4.57500602818627,1.25654352112864,2.78118912307642,3.3243009452943,2.49345653471472,4.05603157669394,0.203678727700633,0.622034853050465,0.758168275301024,1.26265113531884,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,1.42876648217788,1.66547836370305,1.49922759295566,1.55222022443409,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0.51469581422943,1.42081749697796,0.207125772535502,0.234526059981096,0.36012412292203,0,0.787056926989615,0.617068451549513,0.697601834251224,0.536546802799238,0.817357396570186,0.987359099480883,0.492502392237286,0.729619285912702,0.877199924551994,1.09775057645525,0.536825675041487,2.73376933133365,0.514523061896422,0.660837565967596,0,0,0.232236671860439,0,0.80673409849337,0.22237804384487,0.570676878337677,0.949058123089023,0.164698954724011,1.00534083520108,0,0.58489226135736,0,0,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.911765658574141,0.569128834118316,0.590440591918409,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.50925170356284,2.01387296215567,0.810676133875177,0.549122826376163,0,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0.964887042726734,4.0645701836653,0,0.162964976442026,0,0.469380496577004,0.502518772325447,1.90434912708811,1.75620283072019,1.7339865851681,1.7717175171902,2.07291199254733,2.29408640602033,3.7990696010497,3.47157740595628,7.53956419696361,16.3171705145613,1.47529281905711,1.10374698521893,2.0871576698413,2.81308047821288,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.790575555893047,1.60660658210904,0.283880170416537,0.534196811001766,0.325773918707152,1.31976098378028,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,1.03371317267288,2.54473610634254,0.712994756769443,0.632073515871632,0,1.03135543248187,3.40439605753788,0.900305470156551,1.68166288917581,1.71469628025274,2.48276327099183,3.38900753443934,3.62007845324666,1.522324745573,0.704015124191131,3.81297727554876,0.220528398054962,0,0.161464426695906,0.361877549568935,0.358117032009409,0.820704498725306,0.291480836629851,2.78137953015765,2.05045056957423,1.23832120777933,1.29636169158798,0.753473828018764,0.956859594047176,2.74533807847827,2.20971958992012,4.05859211738608,3.59319931891502,0,0,0,0.432021363287205,0.627264888043406,0.655087691238533,0,0.661227645802687,0.523511883968059,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0.827292452285488,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,1.0416350787516,1.36317147753424,0,0.288030006257865,2.8441000856536,0.810900861160657,1.1298205288131,1.16928740680016,1.43221356533985,1.19208812868759,1.32214994471966,1.18151621739662,0.807731599585181,1.37172251979,2.01652370273681,2.14407337627455,3.36741445741153,4.20756847853648,0.680191150845634,0,0.179427713218951,0.167884616364078,0.772758376128762,0.93841237725591,0.549454872801795,1.71494703263253,0.501572104035363,1.12950368523413,1.38097570952153,1.14579102687879,3.26521046453006,3.42541259885321,2.2661816921691,2.02506750069542,4.95353323546643,2.71885445390523,6.21312374102184,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.512201219238954,0.229741875822453,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.761531471025089,0.365855945745545,0,0.814824683075171,0.561142271657738,0.237270036248348,0.886540341380071,0.409231043169689,0.619747364743864,0.771626443924566,0.749431733813838,0.233931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.695603506861264|short_description=p4@Abcg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11307 | |||
|HGNC= | |||
|MCL_coexpression_id=2202 | |||
|TSSclassifier=NA | |||
|UniProt=Q64343 | |||
|association_with_transcript=6bp_to_ENSMUST00000024829_5end | |||
|cluster_id=chr17:31194649..31194658,+ | |||
|description=CAGE_peak_4_at_Abcg1_5end | |||
|id=chr17:31194649..31194658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.55e-12!86;UBERON:0000033!7.34e-11!63;UBERON:0000955!1.90e-10!50;UBERON:0006238!1.90e-10!50;UBERON:0001049!2.12e-10!52;UBERON:0005068!2.12e-10!52;UBERON:0006241!2.12e-10!52;UBERON:0007135!2.12e-10!52;UBERON:0002616!3.31e-10!49;UBERON:0000153!9.59e-10!94;UBERON:0003080!4.06e-08!40;UBERON:0001017!4.64e-08!73;UBERON:0005743!4.64e-08!73;UBERON:0003056!6.03e-08!49;UBERON:0002780!1.35e-07!39;UBERON:0001890!1.35e-07!39;UBERON:0006240!1.35e-07!39;UBERON:0000073!1.54e-07!75;UBERON:0001016!1.54e-07!75;UBERON:0000477!1.75e-07!154;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0004121!7.34e-07!102;UBERON:0000924!7.34e-07!102;UBERON:0006601!7.34e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-15,54;UBERON:0001049,1.94e-13,52;UBERON:0005068,1.94e-13,52;UBERON:0006241,1.94e-13,52;UBERON:0007135,1.94e-13,52;UBERON:0001017,1.11e-11,73;UBERON:0002346,1.15e-11,64;UBERON:0003075,1.15e-11,64;UBERON:0007284,1.15e-11,64;UBERON:0000955,2.04e-11,47;UBERON:0006238,2.04e-11,47;UBERON:0002616,4.26e-11,46;UBERON:0001016,5.95e-11,75;UBERON:0010371,7.37e-11,73;UBERON:0004121,1.39e-10,95;UBERON:0000924,1.39e-10,95;UBERON:0006601,1.39e-10,95;UBERON:0003080,9.84e-10,40;UBERON:0003056,2.62e-09,49;UBERON:0002780,4.82e-09,39;UBERON:0001890,4.82e-09,39;UBERON:0006240,4.82e-09,39;UBERON:0002020,4.73e-07,34 | |||
|phase1_expression=1.44133962394315,0,0,0.30246421130683,0,0.503637815735669,0.467225281191051,2.7115897922731,0.985521055061667,0.936258105287974,0,0,2.9104124088305,4.02133851127388,0.999329285446988,0.809901069559304,0,3.15462165358238,1.7824876368746,2.12194825899015,1.36069264241712,1.88652807281682,2.35079810225042,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0,4.18531630736908,0.7813353445238,1.57057123192139,2.94115744015507,3.41522742479223,2.42755176515577,0,0,0,0,0.218025156380447,0,0,0,0,2.85230430298152,2.90144856804538,2.35265659399725,0,0.85960031981627,0,0.809265843438391,1.05798195854407,0.633831403506179,0.338844532069132,0,6.29929802096979,4.94433181283487,7.104801149461,4.19440154725767,3.07374644257244,0.311068836925433,0.135005938331691,0.630974884054146,3.42781181284564,1.98781686856452,1.22490799214954,0.479227355091182,0.919218786610021,6.60695285996332,4.21368215681119,3.37934373163736,1.31886287730194,1.73826522844578,0.52091337055676,2.51264699101243,3.93933827022176,4.12555268997387,1.76777151284201,1.13897344639282,1.3047961207771,0.530083353332288,0.0755715601067855,3.18850937571846,1.72084775396277,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,2.84831672011889,1.48442139064825,0.173485326766136,0.304465478312141,1.15307748628029,0,0.587943535678524,0.376999773989026,2.71914464507811,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,0,0,5.27005434620785,6.0739544975902,0.510914110417183,2.27648736561249,0.599902730993408,2.1601938602421,5.54225365797844,4.57500602818627,1.25654352112864,2.78118912307642,3.3243009452943,2.49345653471472,4.05603157669394,0.203678727700633,0.622034853050465,0.758168275301024,1.26265113531884,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,1.42876648217788,1.66547836370305,1.49922759295566,1.55222022443409,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.796137067273973,0,0.51469581422943,1.42081749697796,0.207125772535502,0.234526059981096,0.36012412292203,0,0.787056926989615,0.617068451549513,0.697601834251224,0.536546802799238,0.817357396570186,0.987359099480883,0.492502392237286,0.729619285912702,0.877199924551994,1.09775057645525,0.536825675041487,2.73376933133365,0.514523061896422,0.660837565967596,0,0,0.232236671860439,0,0.80673409849337,0.22237804384487,0.570676878337677,0.949058123089023,0.164698954724011,1.00534083520108,0,0.58489226135736,0,0,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.911765658574141,0.569128834118316,0.590440591918409,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,0.50925170356284,2.01387296215567,0.810676133875177,0.549122826376163,0,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0.964887042726734,4.0645701836653,0,0.162964976442026,0,0.469380496577004,0.502518772325447,1.90434912708811,1.75620283072019,1.7339865851681,1.7717175171902,2.07291199254733,2.29408640602033,3.7990696010497,3.47157740595628,7.53956419696361,16.3171705145613,1.47529281905711,1.10374698521893,2.0871576698413,2.81308047821288,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.790575555893047,1.60660658210904,0.283880170416537,0.534196811001766,0.325773918707152,1.31976098378028,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,1.03371317267288,2.54473610634254,0.712994756769443,0.632073515871632,0,1.03135543248187,3.40439605753788,0.900305470156551,1.68166288917581,1.71469628025274,2.48276327099183,3.38900753443934,3.62007845324666,1.522324745573,0.704015124191131,3.81297727554876,0.220528398054962,0,0.161464426695906,0.361877549568935,0.358117032009409,0.820704498725306,0.291480836629851,2.78137953015765,2.05045056957423,1.23832120777933,1.29636169158798,0.753473828018764,0.956859594047176,2.74533807847827,2.20971958992012,4.05859211738608,3.59319931891502,0,0,0,0.432021363287205,0.627264888043406,0.655087691238533,0,0.661227645802687,0.523511883968059,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0.827292452285488,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,1.0416350787516,1.36317147753424,0,0.288030006257865,2.8441000856536,0.810900861160657,1.1298205288131,1.16928740680016,1.43221356533985,1.19208812868759,1.32214994471966,1.18151621739662,0.807731599585181,1.37172251979,2.01652370273681,2.14407337627455,3.36741445741153,4.20756847853648,0.680191150845634,0,0.179427713218951,0.167884616364078,0.772758376128762,0.93841237725591,0.549454872801795,1.71494703263253,0.501572104035363,1.12950368523413,1.38097570952153,1.14579102687879,3.26521046453006,3.42541259885321,2.2661816921691,2.02506750069542,4.95353323546643,2.71885445390523,6.21312374102184,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.512201219238954,0.229741875822453,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.761531471025089,0.365855945745545,0,0.814824683075171,0.561142271657738,0.237270036248348,0.886540341380071,0.409231043169689,0.619747364743864,0.771626443924566,0.749431733813838,0.233931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Abcg1 | |||
}} |
Latest revision as of 05:38, 26 September 2015
Short description: | p4@Abcg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Abcg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2202 |
Association with transcript: | 6bp_to_ENSMUST00000024829_5end |
EntrezGene: | Abcg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.93e-15 | 54 |
neural tube | 1.94e-13 | 52 |
neural rod | 1.94e-13 | 52 |
future spinal cord | 1.94e-13 | 52 |
neural keel | 1.94e-13 | 52 |
central nervous system | 1.11e-11 | 73 |
neurectoderm | 1.15e-11 | 64 |
neural plate | 1.15e-11 | 64 |
presumptive neural plate | 1.15e-11 | 64 |
brain | 2.04e-11 | 47 |
future brain | 2.04e-11 | 47 |
regional part of brain | 4.26e-11 | 46 |
nervous system | 5.95e-11 | 75 |
ecto-epithelium | 7.37e-11 | 73 |
ectoderm-derived structure | 1.39e-10 | 95 |
ectoderm | 1.39e-10 | 95 |
presumptive ectoderm | 1.39e-10 | 95 |
anterior neural tube | 9.84e-10 | 40 |
pre-chordal neural plate | 2.62e-09 | 49 |
regional part of forebrain | 4.82e-09 | 39 |
forebrain | 4.82e-09 | 39 |
future forebrain | 4.82e-09 | 39 |
gray matter | 4.73e-07 | 34 |