FFCP PHASE1:Hg19::chrX:152774348..152774479,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:152774348..152774479,+
|short_description=p2@BGN
|description=CAGE_peak_2_at_BGN_5end
|association_with_transcript=472bp_to_U11686_5end
|EntrezGene=633
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=472bp_to_U11686_5end | |||
|cluster_id=chrX:152774348..152774479,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_2_at_BGN_5end | |||
|id=chrX:152774348..152774479,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-25!180;CL:0000057!3.19e-16!75;CL:0000183!5.54e-13!59;CL:0000222!2.17e-12!119;CL:0000187!2.39e-12!54;CL:0000680!3.60e-12!57;CL:0000056!3.60e-12!57;CL:0000355!3.60e-12!57;CL:0000393!1.12e-10!60;CL:0000211!1.12e-10!60;CL:0000359!1.39e-10!32;CL:0000192!1.35e-09!42;CL:0000514!1.35e-09!42;CL:0002620!6.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.56e-11;32!CL:0000327;1.07e-07;15!CL:0002334;1.21e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.77e-15,76;CL:0000359,3.00e-11,32;CL:0000187,5.15e-11,55;CL:0000680,2.81e-10,58;CL:0000056,2.81e-10,58;CL:0000355,2.81e-10,58;CL:0000222,1.79e-09,121;CL:0000393,3.23e-09,61;CL:0000211,3.23e-09,61;CL:0000192,6.27e-08,43;CL:0000514,6.27e-08,43;CL:0002334,1.18e-07,12;CL:0000327,1.27e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.01e-22!84;UBERON:0002049!5.97e-20!79;UBERON:0007798!5.97e-20!79;UBERON:0000055!7.62e-18!69;UBERON:0001981!1.04e-17!60;UBERON:0007500!1.04e-17!60;UBERON:0004537!1.04e-17!60;UBERON:0006965!1.04e-17!60;UBERON:0001009!2.61e-17!113;UBERON:0004535!9.65e-17!110;UBERON:0001637!2.19e-15!42;UBERON:0003509!2.19e-15!42;UBERON:0004572!2.19e-15!42;UBERON:0003914!4.71e-15!118;UBERON:0000477!1.37e-14!286;UBERON:0004290!6.29e-14!70;UBERON:0004111!6.89e-14!241;UBERON:0000914!1.41e-13!83;UBERON:0002329!1.41e-13!83;UBERON:0003077!1.41e-13!83;UBERON:0003059!1.41e-13!83;UBERON:0007282!1.41e-13!83;UBERON:0009618!1.41e-13!83;UBERON:0007285!1.41e-13!83;UBERON:0002385!3.41e-13!63;UBERON:0001015!3.41e-13!63;UBERON:0000383!3.41e-13!63;UBERON:0001134!4.91e-13!61;UBERON:0002036!4.91e-13!61;UBERON:0003082!4.91e-13!61;UBERON:0004573!6.25e-13!33;UBERON:0004571!6.25e-13!33;UBERON:0000475!7.81e-13!365;UBERON:0000025!6.42e-12!194;UBERON:0000119!2.96e-11!312;UBERON:0005256!1.13e-10!143;UBERON:0000483!1.68e-10!309;UBERON:0000486!4.18e-10!82;UBERON:0000947!1.01e-09!21;UBERON:0010191!1.01e-09!21;UBERON:0007100!3.82e-09!27;UBERON:0000468!5.39e-09!659;UBERON:0000490!9.26e-09!138;UBERON:0000948!1.05e-08!24;UBERON:0005498!1.05e-08!24;UBERON:0004140!1.05e-08!24;UBERON:0009881!1.05e-08!24;UBERON:0004141!1.05e-08!24;UBERON:0003084!1.05e-08!24;UBERON:0007005!1.05e-08!24;UBERON:0004139!1.05e-08!24;UBERON:0004291!1.05e-08!24;UBERON:0000481!5.20e-08!347;UBERON:0007023!1.57e-07!115;UBERON:0002100!5.31e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.01e-13;33!UBERON:0004571;1.01e-13;33!UBERON:0001637;2.48e-13;42!UBERON:0003509;2.48e-13;42!UBERON:0004572;2.48e-13;42!UBERON:0000947;3.45e-11;21!UBERON:0010191;3.45e-11;21!UBERON:0007100;2.69e-10;25!UBERON:0000948;8.89e-10;22!UBERON:0007500;3.60e-09;56!UBERON:0001981;3.60e-09;56!UBERON:0004537;3.60e-09;56!UBERON:0000055;2.57e-08;65!UBERON:0002049;8.55e-07;75!UBERON:0007798;8.55e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.12e-24,83;UBERON:0007500,2.82e-18,59;UBERON:0001981,2.82e-18,59;UBERON:0004537,2.82e-18,59;UBERON:0006965,2.82e-18,59;UBERON:0000055,2.93e-18,68;UBERON:0001637,4.76e-18,42;UBERON:0003509,4.76e-18,42;UBERON:0004572,4.76e-18,42;UBERON:0002049,7.82e-18,78;UBERON:0007798,7.82e-18,78;UBERON:0001009,1.75e-17,112;UBERON:0004535,7.80e-17,109;UBERON:0003914,1.16e-15,117;UBERON:0004573,3.72e-15,33;UBERON:0004571,3.72e-15,33;UBERON:0000947,3.49e-11,21;UBERON:0010191,3.49e-11,21;UBERON:0007524,6.17e-11,73;UBERON:0007100,1.13e-10,27;UBERON:0002385,1.29e-10,64;UBERON:0001015,1.29e-10,64;UBERON:0000383,1.29e-10,64;UBERON:0003077,1.92e-10,72;UBERON:0007285,1.92e-10,72;UBERON:0001134,2.12e-10,62;UBERON:0002036,2.12e-10,62;UBERON:0003082,2.12e-10,62;UBERON:0002329,2.82e-10,71;UBERON:0003059,2.82e-10,71;UBERON:0007282,2.82e-10,71;UBERON:0004290,2.82e-10,71;UBERON:0009618,2.82e-10,71;UBERON:0007503,2.98e-10,78;UBERON:0000948,3.68e-10,24;UBERON:0005498,3.68e-10,24;UBERON:0004140,3.68e-10,24;UBERON:0009881,3.68e-10,24;UBERON:0004141,3.68e-10,24;UBERON:0003084,3.68e-10,24;UBERON:0007005,3.68e-10,24;UBERON:0004139,3.68e-10,24;UBERON:0004291,3.68e-10,24;UBERON:0003104,1.20e-09,160;UBERON:0009142,1.20e-09,160;UBERON:0005256,2.52e-09,122;UBERON:0004111,2.24e-08,240;UBERON:0000486,5.39e-08,83;UBERON:0000926,9.23e-08,315;UBERON:0004120,9.23e-08,315;UBERON:0006603,9.23e-08,315;UBERON:0000025,1.54e-07,192;UBERON:0000490,2.67e-07,148 | |||
|phase1_expression=8.90224058425727,9.42042305120326,5.49722175974288,6.00439790118782,7.15137751083661,7.85104671690332,15.1979926900986,6.94891860769514,0.522371256399677,0,0,0,0,3.7129905888014,5.30235801164665,7.39557661096953,12.6565850885035,10.9546513558106,8.78279037822912,0.369363174230364,4.89601658986207,4.70182082217132,0,0.136874425072884,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,2.01210257911091,2.81297636055767,33.9752803241492,35.0936537445123,57.0695284705645,62.8275898170368,157.669697978054,0.189069634328136,0.221729397462564,0.614843499851882,2.61958150995425,0,0,0,0,0,0,0,0,1.78886166630035,2.58070378531837,7.63709103536707,6.21838736116411,7.97048928798821,5.22724279686128,3.13492449805216,1.29208379584664,1.06729878806013,3.3472061276467,1.20848795132744,0,8.29810995663776,2.20597848207521,21.8738325928075,2.94689103337463,0.44905874525234,0.337834441449967,0,0.949265659568129,6.22885929363385,0,0,0,46.7153634593599,54.0712284807756,3.31022952033047,180.993907692501,32.2748227800505,11.2135520028461,53.3744978648525,40.2068103919971,2.17847724779836,9.29503637280848,6.04809041519797,45.8613005764142,37.4514350911999,1.17160715916898,1.87296046098192,0.570471821544449,1.64393548606981,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0.368502951935304,0.826606249406124,3.56400857184616,16.5668842616633,0.910161361938026,0,0.168336113954066,1.12606667884768,0,3.5118209670467,3.67785354958824,6.61047459189026,4.42385514324082,14.351170855109,12.5998859402955,12.7159140695737,14.7044637081357,14.0151439764277,6.95629458123199,10.2364270982374,17.5527385530917,20.8515191044965,14.8935926804028,12.9790357085642,20.2057571023515,29.465796178879,9.47069723339819,5.59549954624609,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0.252320850875628,0,6.25798129319264,12.2215778256648,11.0507937081984,1.39310378409594,0,0,0,0,0,0,0,0,0,0,3.69077727312324,23.8411015465858,2.057870056657,10.2906097969879,0,1.96565443335525,35.4473944008842,0,0,0.857839051492628,0,0,0,0,1.62904152655162,0,1.44331342025273,0.231860809950154,1.52631302506568,9.67255199999195,9.25971025153221,15.9813487877063,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,3.4214489204541,0.102827492703324,0,0,13.679992290134,5.23152082599936,11.1474194447844,10.9880958394111,32.1890801266694,8.45302752556,11.7012771297343,6.24044621468197,1.02882949704857,2.83698264046557,2.93064396917709,0.714889968290738,12.4802969240032,0.823240336780769,4.56030658011229,0.355391948742546,0,0,0,0.199945982364114,0,0,0,36.9022277457037,79.2547357255386,1.42636905040718,0.434343920002738,2.05476322550383,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,4.46557126157214,0,0,0,7.85225547002495,15.50528615285,4.34024037919577,64.8869087976118,69.4088766420959,49.2031534905876,28.4653638432293,18.9596042828463,90.9630016223939,78.6395341823037,31.882828729701,7.37476674166813,3.30157734978715,117.676495635107,97.4527323622831,0,0,0,0,0,1.81434175997808,22.8259183193275,11.6631099698927,29.4693099154727,8.84160129864337,17.3980464682679,32.0099303075779,16.325987308949,6.47680713971153,41.0167585473324,4.18848495670427,1.55776328755086,6.50778119375772,3.2632051389738,0,0.184161977871793,0.803701137152247,4.91646153618136,2.88473712910733,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,3.4120015221269,0,2.59099099322567,84.8249889796591,0.812839312631559,1.50506932156456,0,0.831076008928724,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,10.5101831880677,0,0.082509499920588,2.29706215198469,0.650060246036521,12.8547143875328,26.8744596852099,1.69453478826109,3.22357716924872,2.48105830472155,3.22260734604821,4.49551751134108,2.21589231281862,45.406338179836,0,0,0,0,12.0859842817294,78.3882743608294,3.485186350803,9.24100740528266,10.6461206063404,4.34966496037536,32.2464141240821,1.71749864090389,7.44316738719335,7.2767267685307,0.571890581771475,0.511795582622668,0.855877976067841,7.00047145437061,10.20433232259,0.359744915166629,0.274537029736055,0.589062011728432,11.7265839312523,7.92551605865041,0,0,9.26111260598881,9.50851320810799,2.04749867111979,2.2624869112594,3.39024349860728,2.75682671773062,13.9322184800656,11.3997230165978,1.73632660280006,1.31178950409327,3.85529716229138,9.2947049429925,13.5213889215476,0.573645408816206,1.76848273823618,2.85336841185,0.709522128141196,19.4219024473851,23.0506425071931,0.75894634753143,2.79947776195986,0,0.670302275535787,0,12.5211255033116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,2.14870036263921,0,0,1.9882952955326,0.422008249231538,0,0,6.75601306009579,79.699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| ||
|short_description=p2@BGN | |||
}} | }} |
Latest revision as of 00:13, 20 September 2015
Short description: | p2@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 472bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.77e-15 | 76 |
vascular associated smooth muscle cell | 3.00e-11 | 32 |
muscle cell | 5.15e-11 | 55 |
muscle precursor cell | 2.81e-10 | 58 |
myoblast | 2.81e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-10 | 58 |
mesodermal cell | 1.79e-09 | 121 |
electrically responsive cell | 3.23e-09 | 61 |
electrically active cell | 3.23e-09 | 61 |
smooth muscle cell | 6.27e-08 | 43 |
smooth muscle myoblast | 6.27e-08 | 43 |
preadipocyte | 1.18e-07 | 12 |
extracellular matrix secreting cell | 1.27e-07 | 15 |