FFCP PHASE1:Hg19::chrX:152774185..152774199,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:152774185..152774199,+
|short_description=p8@BGN
|description=CAGE_peak_8_at_BGN_5end
|association_with_transcript=309bp_to_U11686_5end
|EntrezGene=633
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=309bp_to_U11686_5end | |||
|cluster_id=chrX:152774185..152774199,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_8_at_BGN_5end | |||
|id=chrX:152774185..152774199,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.41e-22!180;CL:0000057!4.91e-13!75;CL:0000359!6.14e-11!32;CL:0000183!1.57e-10!59;CL:0000680!2.28e-10!57;CL:0000056!2.28e-10!57;CL:0000355!2.28e-10!57;CL:0000187!4.31e-10!54;CL:0000222!1.07e-09!119;CL:0000393!1.01e-08!60;CL:0000211!1.01e-08!60;CL:0000192!6.31e-08!42;CL:0000514!6.31e-08!42;CL:0002334!3.28e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.86e-09;32!CL:0002620;1.18e-08;23!CL:0000327;1.43e-08;15!CL:0002570;5.02e-08;8!CL:0000153;3.47e-07;9!CL:0000447;3.47e-07;9!CL:0002539;4.36e-07;10!CL:0002334;6.36e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.36e-18,76;CL:0000048,4.84e-10,427;CL:0000723,1.75e-09,433;CL:0000359,2.55e-09,32;CL:0000034,8.99e-09,441;CL:0002620,1.18e-08,23;CL:0000327,1.25e-08,15;CL:0002570,3.97e-08,8;CL:0000153,3.46e-07,9;CL:0000447,3.46e-07,9;CL:0002320,4.27e-07,361;CL:0002539,5.53e-07,10;CL:0002334,7.29e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.19e-20!84;UBERON:0002049!2.28e-19!79;UBERON:0007798!2.28e-19!79;UBERON:0001009!7.99e-18!113;UBERON:0004535!5.06e-17!110;UBERON:0000055!2.40e-16!69;UBERON:0001981!3.02e-15!60;UBERON:0007500!3.02e-15!60;UBERON:0004537!3.02e-15!60;UBERON:0006965!3.02e-15!60;UBERON:0001637!6.68e-15!42;UBERON:0003509!6.68e-15!42;UBERON:0004572!6.68e-15!42;UBERON:0004573!4.02e-13!33;UBERON:0004571!4.02e-13!33;UBERON:0002385!6.10e-11!63;UBERON:0001015!6.10e-11!63;UBERON:0000383!6.10e-11!63;UBERON:0001134!9.90e-11!61;UBERON:0002036!9.90e-11!61;UBERON:0003082!9.90e-11!61;UBERON:0003914!1.62e-10!118;UBERON:0000477!1.27e-09!286;UBERON:0007100!3.44e-09!27;UBERON:0004290!1.13e-08!70;UBERON:0000947!1.23e-08!21;UBERON:0010191!1.23e-08!21;UBERON:0004111!1.53e-08!241;UBERON:0000948!1.96e-08!24;UBERON:0005498!1.96e-08!24;UBERON:0004140!1.96e-08!24;UBERON:0009881!1.96e-08!24;UBERON:0004141!1.96e-08!24;UBERON:0003084!1.96e-08!24;UBERON:0007005!1.96e-08!24;UBERON:0004139!1.96e-08!24;UBERON:0004291!1.96e-08!24;UBERON:0000914!3.21e-08!83;UBERON:0002329!3.21e-08!83;UBERON:0003077!3.21e-08!83;UBERON:0003059!3.21e-08!83;UBERON:0007282!3.21e-08!83;UBERON:0009618!3.21e-08!83;UBERON:0007285!3.21e-08!83;UBERON:0000025!1.87e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.39e-13;33!UBERON:0004571;6.39e-13;33!UBERON:0001637;1.71e-11;42!UBERON:0003509;1.71e-11;42!UBERON:0004572;1.71e-11;42!UBERON:0000947;2.14e-11;21!UBERON:0010191;2.14e-11;21!UBERON:0000948;1.62e-07;22!UBERON:0001013;2.52e-07;14!UBERON:0004237;4.36e-07;10!UBERON:0004695;4.36e-07;10!UBERON:0002111;4.36e-07;10!UBERON:0004178;4.36e-07;10!UBERON:0007100;4.56e-07;25!UBERON:0002384;9.59e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.96e-18,83;UBERON:0001637,5.53e-15,42;UBERON:0003509,5.53e-15,42;UBERON:0004572,5.53e-15,42;UBERON:0002049,1.44e-14,78;UBERON:0007798,1.44e-14,78;UBERON:0004573,2.63e-14,33;UBERON:0004571,2.63e-14,33;UBERON:0004535,4.29e-14,109;UBERON:0001009,5.64e-14,112;UBERON:0000055,7.74e-14,68;UBERON:0007500,2.13e-13,59;UBERON:0001981,2.13e-13,59;UBERON:0004537,2.13e-13,59;UBERON:0006965,2.13e-13,59;UBERON:0000947,2.90e-11,21;UBERON:0010191,2.90e-11,21;UBERON:0003914,1.93e-10,117;UBERON:0000948,1.44e-07,24;UBERON:0005498,1.44e-07,24;UBERON:0004140,1.44e-07,24;UBERON:0009881,1.44e-07,24;UBERON:0004141,1.44e-07,24;UBERON:0003084,1.44e-07,24;UBERON:0007005,1.44e-07,24;UBERON:0004139,1.44e-07,24;UBERON:0004291,1.44e-07,24;UBERON:0001013,1.90e-07,14;UBERON:0007100,3.84e-07,27;UBERON:0002384,5.00e-07,371;UBERON:0004237,5.53e-07,10;UBERON:0004695,5.53e-07,10;UBERON:0002111,5.53e-07,10;UBERON:0004178,5.53e-07,10 | |||
|phase1_expression=1.45342703416445,3.42560838225573,0.845726424575827,3.00219895059391,1.34088328328186,2.61701557230111,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0,0,1.98026164736075,2.31978163009541,5.3786011716142,3.61616716814386,2.19093027116212,8.78279037822912,0.246242116153576,0.816002764977012,0.313454721478088,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.895037932904712,6.86734389530676,7.01873074890245,12.6016471495917,9.54343136461319,24.3317435151318,0,0.443458794925128,0.175669571386252,0.785874452986276,0,0,0,0,0,0,0,0,0,0.860234595106124,1.73570250803797,1.13061588384802,1.67799774483962,1.92582629358047,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0,2.4406205754817,0,5.67099363517232,0.625098097988558,0.673588117878509,0.788280363383256,1.53316637465883,0,1.28241220751285,0,0,0,11.4303548889923,9.75054939817264,1.05927344650575,23.5206029014027,3.54668382198357,3.92474320099615,13.8773694448616,7.15335890409764,0,2.55950276932407,2.12500474047496,7.11379909931178,12.09969441408,0.234321431833797,0,0,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0,0,1.97813543422845,0,2.15585442544872,0,0,0,0,2.14541457059314,1.05166641234618,2.60894021268048,4.12596162084383,2.98980344345994,4.66250182551036,4.50136644126603,3.60683852334536,3.09168648054755,2.79175284497385,6.58227695740938,6.72315335612271,8.07788077581166,3.31379635112278,5.33431987502079,4.9701342952326,2.11579406278045,2.37384829234683,0,0,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0,0,5.78916844373597,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0,0.234817388471643,1.01056513432752,5.55582615091933,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,3.47606361470618,1.30788020649984,3.9602674343313,1.93907573636667,3.57656445851882,5.071816515336,1.59562869950922,0,0.771622122786426,0,2.1313774321288,0.142977993658148,3.25572963234866,0,1.30294473717494,0,0,0,0,0,0,0,0,8.86611965318856,17.2292903751171,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,1.71768088406796,2.50085260529839,1.08506009479894,15.5978146148105,22.8389105660367,11.0391690523754,10.8941515943223,5.71797589482666,25.0148254461583,16.5556914068008,8.63493278096067,2.39679919104214,0.173767228936166,17.8179053291094,16.8140277667319,0,0,0,0,1.66435439510497,0,3.47350930946288,5.06424511850606,8.98112302185835,0.768834895534206,4.60536524160033,8.84696566289841,1.48418066444991,2.15893571323718,5.50441348470694,0.574890092096664,0.519254429183621,2.32420756919918,0.846016147141356,0,0.276242966807689,0.114814448164607,0.910455840033585,0.524497659837696,0,0,0,0,0.105551628892876,0,0,1.51141141271498,27.7609054842521,0,0.501689773854853,0,0,0,0,0,0,0,1.30151357865721,0.618246069886334,0,0,0,0,3.21367859688319,2.80345083047154,0.462145851343933,1.5350367472613,0.689182862422653,0.537101224341368,1.0151168573996,0.852266274161009,6.94449878044551,0,0,0,0.10115778085555,3.253918845081,10.3888074454111,0,0.616067160352178,2.12922412126809,4.34966496037536,1.8532421910392,0.286249773483982,3.34942532423701,4.74569137078089,0.38126038784765,0,0,0.95460974377781,3.92474320099615,0.179872457583315,0,0,2.42618977887979,3.17020642346017,0.421258456238981,0.48763373908959,2.43713489631284,1.05650146756755,0.409499734223957,0.141405431953713,0,0.551365343546124,5.97095077717098,2.63070531152258,0,0,0.608731130888112,1.8589409885985,1.97186921772569,0,0.294747123039363,0.7133421029625,0,5.69990615303693,4.61012850143863,0.379473173765715,0.349934720244983,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0.994147647766298,0,0,0,1.26675244876796,14.1466071658259,0,0,0,0,3.73247505194169,0,0,0,0.591860433821602,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,1.61595542857974,0,0,0,0,2.55200927785536,2.1983422416447,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.93774963014692,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0.600420288709789,0.410716136675979,0,0,0,5.02708322290058,4.58320848023367,0.717873024576814,0.998395002494955,1.28767814440971,0.446342914883745,0.604651252380536,3.60299883542404,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.13620340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| ||
|short_description=p8@BGN | |||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p8@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 309bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.36e-18 | 76 |
multi fate stem cell | 4.84e-10 | 427 |
somatic stem cell | 1.75e-09 | 433 |
vascular associated smooth muscle cell | 2.55e-09 | 32 |
stem cell | 8.99e-09 | 441 |
skin fibroblast | 1.18e-08 | 23 |
extracellular matrix secreting cell | 1.25e-08 | 15 |
mesenchymal stem cell of adipose | 3.97e-08 | 8 |
GAG secreting cell | 3.46e-07 | 9 |
carbohydrate secreting cell | 3.46e-07 | 9 |
connective tissue cell | 4.27e-07 | 361 |
aortic smooth muscle cell | 5.53e-07 | 10 |
preadipocyte | 7.29e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.96e-18 | 83 |
artery | 5.53e-15 | 42 |
arterial blood vessel | 5.53e-15 | 42 |
arterial system | 5.53e-15 | 42 |
vasculature | 1.44e-14 | 78 |
vascular system | 1.44e-14 | 78 |
systemic artery | 2.63e-14 | 33 |
systemic arterial system | 2.63e-14 | 33 |
cardiovascular system | 4.29e-14 | 109 |
circulatory system | 5.64e-14 | 112 |
vessel | 7.74e-14 | 68 |
epithelial tube open at both ends | 2.13e-13 | 59 |
blood vessel | 2.13e-13 | 59 |
blood vasculature | 2.13e-13 | 59 |
vascular cord | 2.13e-13 | 59 |
aorta | 2.90e-11 | 21 |
aortic system | 2.90e-11 | 21 |
epithelial tube | 1.93e-10 | 117 |
heart | 1.44e-07 | 24 |
primitive heart tube | 1.44e-07 | 24 |
primary heart field | 1.44e-07 | 24 |
anterior lateral plate mesoderm | 1.44e-07 | 24 |
heart tube | 1.44e-07 | 24 |
heart primordium | 1.44e-07 | 24 |
cardiac mesoderm | 1.44e-07 | 24 |
cardiogenic plate | 1.44e-07 | 24 |
heart rudiment | 1.44e-07 | 24 |
adipose tissue | 1.90e-07 | 14 |
primary circulatory organ | 3.84e-07 | 27 |
connective tissue | 5.00e-07 | 371 |
blood vessel smooth muscle | 5.53e-07 | 10 |
arterial system smooth muscle | 5.53e-07 | 10 |
artery smooth muscle tissue | 5.53e-07 | 10 |
aorta smooth muscle tissue | 5.53e-07 | 10 |