FFCP PHASE1:Hg19::chr5:145439349..145439396,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26299 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011dbo.1_5end | |||
|cluster_id=chr5:145439349..145439396,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_5_at_SH3RF2_5end | |||
|id=chr5:145439349..145439396,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.78e-24;4!UBERON:0007284;1.78e-24;4!UBERON:0010226;3.27e-12;1!UBERON:0010227;4.06e-12;1!UBERON:0004140;4.53e-12;1!UBERON:0000358;5.62e-12;1!UBERON:0006298;1.32e-11;1!UBERON:0006603;9.54e-08;65!UBERON:0004872;6.58e-07;7 | |||
|ontology_enrichment_disease=DOID:114!2.93e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.49e-22;2!DOID:178;5.05e-12;1!DOID:326;5.05e-12;1!DOID:3978;5.05e-12;1!DOID:3394;5.05e-12;1!DOID:5844;5.05e-12;1!DOID:1287;9.13e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.49e-22,2;DOID:178,5.05e-12,1;DOID:326,5.05e-12,1;DOID:3978,5.05e-12,1;DOID:3394,5.05e-12,1;DOID:5844,5.05e-12,1;DOID:1287,9.13e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.35e-25!115;UBERON:0004151!1.83e-11!3;UBERON:0003978!2.17e-11!3;UBERON:0009751!2.17e-11!3;UBERON:0000946!2.17e-11!3;UBERON:0002523!2.17e-11!3;UBERON:0005983!2.17e-11!3;UBERON:0002165!2.17e-11!3;UBERON:0002062!2.17e-11!3;UBERON:0007280!2.17e-11!3;UBERON:0007100!4.63e-09!27;UBERON:0003103!1.10e-08!69;UBERON:0002081!3.72e-08!2;UBERON:0002133!4.26e-08!2;UBERON:0000341!9.24e-08!2;UBERON:0001255!7.39e-07!2;UBERON:0001556!7.39e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.73e-33;25!UBERON:0004151;1.27e-32;3!UBERON:0003978;2.17e-32;3!UBERON:0000946;2.17e-32;3!UBERON:0002081;3.17e-22;2!UBERON:0002133;4.86e-22;2!UBERON:0000948;4.21e-17;22!UBERON:0002084;3.27e-12;1!UBERON:0002082;3.27e-12;1!UBERON:0002146;3.65e-12;1!UBERON:0005623;3.65e-12;1!UBERON:0002079;4.06e-12;1!UBERON:0002135;6.26e-12;1!UBERON:0002134;6.97e-12;1!UBERON:0005208;6.97e-12;1!UBERON:0004145;6.97e-12;1!UBERON:0005946;6.97e-12;1!UBERON:0005965;6.97e-12;1!UBERON:0002078;6.97e-12;1!UBERON:0007029;7.76e-12;1!UBERON:0001736;1.32e-11;1!UBERON:0010313;3.75e-10;10!UBERON:0003103;1.45e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.27e-32,3;UBERON:0003978,2.17e-32,3;UBERON:0009751,2.17e-32,3;UBERON:0000946,2.17e-32,3;UBERON:0002523,2.17e-32,3;UBERON:0005983,2.17e-32,3;UBERON:0002165,2.17e-32,3;UBERON:0002062,2.17e-32,3;UBERON:0007280,2.17e-32,3;UBERON:0007100,6.26e-31,27;UBERON:0002081,3.17e-22,2;UBERON:0010227,3.17e-22,2;UBERON:0002133,4.86e-22,2;UBERON:0003103,2.27e-17,68;UBERON:0000948,1.20e-15,24;UBERON:0005498,1.20e-15,24;UBERON:0004140,1.20e-15,24;UBERON:0009881,1.20e-15,24;UBERON:0004141,1.20e-15,24;UBERON:0003084,1.20e-15,24;UBERON:0007005,1.20e-15,24;UBERON:0004139,1.20e-15,24;UBERON:0004291,1.20e-15,24;UBERON:0004797,2.90e-14,7;UBERON:0002084,3.27e-12,1;UBERON:0002082,3.27e-12,1;UBERON:0010226,3.27e-12,1;UBERON:0002146,3.65e-12,1;UBERON:0005623,3.65e-12,1;UBERON:0002079,4.06e-12,1;UBERON:0002135,6.26e-12,1;UBERON:0002134,6.97e-12,1;UBERON:0005208,6.97e-12,1;UBERON:0005946,6.97e-12,1;UBERON:0005965,6.97e-12,1;UBERON:0002078,6.97e-12,1;UBERON:0007029,7.76e-12,1;UBERON:0001736,1.19e-11,1;UBERON:0006298,1.19e-11,1;UBERON:0010313,3.75e-10,10;UBERON:0002342,3.75e-10,10;UBERON:0005062,3.75e-10,10;UBERON:0007023,1.24e-09,114;UBERON:0001009,3.98e-08,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.3337953882936,194.098879137896,21.5361907373044,92.0520192300349,276.850801048088,237.677602175594,135.44188053324,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,175.100354961475,223.12499401315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,4.85710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0.714193294391221,0,0,0,0,0,0.653150243690884,0.342233301085281,0.202056159043763,0,3.65926392200615,0.0814032686109745,0,0,0,44.5817790566563,0.122241444182866,0,0,1.20764276154616,0 | |||
|short_description=p5@SH3RF2 | |||
}} |
Latest revision as of 20:02, 15 September 2015
Short description: | p5@SH3RF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SH3RF2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_uc011dbo.1_5end |
EntrezGene: | SH3RF2 |
HGNC: | 26299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.49e-22 | 2 |
vascular disease | 5.05e-12 | 1 |
ischemia | 5.05e-12 | 1 |
extrinsic cardiomyopathy | 5.05e-12 | 1 |
myocardial ischemia | 5.05e-12 | 1 |
myocardial infarction | 5.05e-12 | 1 |
cardiovascular system disease | 9.13e-12 | 4 |