FFCP PHASE1:Hg19::chrX:151620193..151620201,-: Difference between revisions
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|id=chrX:151620193..151620201,-
|short_description=p4@GABRA3
|description=CAGE_peak_4_at_GABRA3_5end
|association_with_transcript=135bp_to_ENST00000370311_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2556 | |EntrezGene=2556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4077 | |HGNC=4077 | ||
|TSSclassifier=strong | |||
|UniProt=P34903 | |UniProt=P34903 | ||
|association_with_transcript=135bp_to_ENST00000370311_5end | |||
|cluster_id=chrX:151620193..151620201,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_4_at_GABRA3_5end | |||
|id=chrX:151620193..151620201,- | |||
|ontology_enrichment_celltype=CL:0002536!1.08e-16!2;CL:0002563!9.94e-09!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.60e-09!1;DOID:1357!1.60e-09!1;DOID:1799!2.04e-09!1;DOID:10165!2.04e-09!1;DOID:1798!2.04e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.37e-99;1!DOID:1357;9.37e-99;1!DOID:5409;7.14e-26;4!DOID:0050615;7.63e-26;16!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.37e-99,1;DOID:1357,9.37e-99,1;DOID:5409,7.14e-26,4;DOID:0050615,7.63e-26,16;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15 | |||
|ontology_enrichment_uberon=UBERON:0002791!3.51e-10!33;UBERON:0001893!7.22e-10!34;UBERON:0001764!1.60e-09!1;UBERON:0001825!1.60e-09!1;UBERON:0001874!4.91e-09!1;UBERON:0001052!5.76e-09!4;UBERON:0002336!6.22e-09!1;UBERON:0001018!6.22e-09!1;UBERON:0002473!6.22e-09!1;UBERON:0005340!6.22e-09!1;UBERON:0002316!6.22e-09!1;UBERON:0003544!6.22e-09!1;UBERON:0001020!6.22e-09!1;UBERON:0005970!6.22e-09!1;UBERON:0002437!6.22e-09!1;UBERON:0001242!9.94e-09!4;UBERON:0001262!9.94e-09!4;UBERON:0004786!9.94e-09!4;UBERON:0004808!9.94e-09!4;UBERON:0001277!9.94e-09!4;UBERON:0002780!4.30e-08!41;UBERON:0001890!4.30e-08!41;UBERON:0006240!4.30e-08!41;UBERON:0003080!6.91e-08!42;UBERON:0001869!7.86e-08!32;UBERON:0000073!1.25e-07!94;UBERON:0001016!1.25e-07!94;UBERON:0001017!1.84e-07!82;UBERON:0002020!2.35e-07!34;UBERON:0003528!2.35e-07!34;UBERON:0004907!2.46e-07!5;UBERON:0003350!3.80e-07!5;UBERON:0005743!4.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;9.37e-99;1!UBERON:0001825;9.37e-99;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.37e-99,1;UBERON:0001825,9.37e-99,1 | |||
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|short_description=p4@GABRA3 | |||
}} | }} |
Latest revision as of 22:55, 19 September 2015
Short description: | p4@GABRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GABRA3_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 135bp_to_ENST00000370311_5end |
EntrezGene: | GABRA3 |
HGNC: | 4077 |
UniProt: | P34903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.37e-99 | 1 |
paranasal sinus | 9.37e-99 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.37e-99 | 1 |
maxillary sinus cancer | 9.37e-99 | 1 |
lung small cell carcinoma | 7.14e-26 | 4 |
respiratory system cancer | 7.63e-26 | 16 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |