FFCP PHASE1:Hg19::chrX:1508352..1508375,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:1508352..1508375,-
|short_description=p@chrX:1508352..1508375,-
|description=CAGE_peak_at_chrX:1508352..1508375,-
|association_with_transcript=NA
|EntrezG...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:1508352..1508375,- | |||
|coexpression_cluster_id=C4855 | |||
|description=CAGE_peak_at_chrX:1508352..1508375,- | |||
|id=chrX:1508352..1508375,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.43e-09;33!CL:0002057;3.43e-09;33!CL:0002521;4.65e-08;3!CL:0000097;2.34e-07;5!CL:0002144;2.40e-07;3!CL:0000473;4.88e-07;39!CL:0000234;4.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,4.77e-08,3;CL:0000860,2.01e-07,42;CL:0002057,2.01e-07,42;CL:0002144,2.18e-07,3;CL:0000097,3.16e-07,5;CL:0002028,3.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.49e-08;3!DOID:127;4.49e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.26e-08,3;DOID:127,4.26e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003134!1.29e-10!37;UBERON:0000474!1.29e-10!37;UBERON:0003100!1.79e-10!41;UBERON:0003975!1.55e-08!22;UBERON:0005795!2.49e-08!22;UBERON:0000995!9.36e-08!21;UBERON:0004175!6.12e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;4.65e-08;3!UBERON:0002072;5.77e-08;5!UBERON:0010523;2.40e-07;3!UBERON:0001915;2.40e-07;3!UBERON:0001982;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,4.77e-08,3;UBERON:0002072,7.03e-08,5;UBERON:0010523,2.18e-07,3;UBERON:0001915,2.18e-07,3;UBERON:0001982,2.18e-07,3;UBERON:0000926,2.67e-07,315;UBERON:0004120,2.67e-07,315;UBERON:0006603,2.67e-07,315 | |||
|phase1_expression=0.726713517082227,2.99740733447376,0.563817616383885,3.00219895059391,0,0,15.1979926900986,2.52687949370732,5.74608382039645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.410502947249729,0.236132343941038,0,0,0,0,3.0120591877825,0,0,0,0,0,0,0,0,0.647787332037959,0,3.19876125315042,0,1.4555043671269,0,0,1.85823822537062,1.43846196161075,0,0.236482229888585,1.03423704220986,0,0,2.63539275359647,0,0.898893937780338,2.75475503133812,0,3.19668562899521,1.9791078011203,0,1.70489900213078,2.32167390902867,0,1.24564449799115,1.7587406567972,0,1.52032191293582,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87842098599313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0,0,0,0,0,1.72046919021225,0.347140501607594,0,1.25849830862972,0,0,0,0,0,1.61131726843659,2.28081631715554,4.63717909341522,0,0,0,0,0,0,0,1.64881569537367,0,0,0,0,1.64619665163954,0.264818361626438,0.860509862246441,1.41867352879343,0,0,2.71334303258876,0,0,0,0,0,0,0,1.1409436430889,2.98897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,1.46368447355514,0.795178609928912,1.51052125730374,1.14027160516907,2.01856680700503,3.28479623168247,0,2.57296375277154,5.52539685409922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.804231779293047,0,0,0,0,0,0,0,0,0,0,3.43394464837949,0,0,0.297262324577456,0,0.335964256397719,0,0.447792613514241,0.290633938513962,0,3.4486426652716,0.528290604079356,1.24396869324463,2.16179930125442,2.65109110195398,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,1.59562869950922,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.899756920638513,0,0,0,0.718874566474748,2.29723871668228,0,0.868687840005475,0,0.716243852959582,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,4.51419149591578,0,0,0,0.921845842708516,0,0,0,0,0,0,0,1.66435439510497,0,1.73675465473144,0.153461973288062,4.2099014164961,0.640695746278505,1.02341449813341,0,0,0.925258162815933,2.13074070375753,0.410635780069046,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81964233415984,0,0,0,0,0,0,0,2.26016233240486,3.30819206127675,0,0,0,0,1.42037263873893,2.478587984798,1.12678241012897,0,0,0,1.06428319221179,0,0,0,0,1.53955380360819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.852408440419239,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0,0,0,0,0,0,0,1.21537496453305,0,0.241192877250816,0,0.552896299656123,0,0,0.435753854075961,0.278847488557207,0.615602068030377,0,0,0,0,0,0,0,0,0.941881538370149,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,1.89898258075224,0.489698424477443,0,0.216388639742091,1.99052386215701,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.63186579628488,0,0,0,0,0,0,0.569219092059585,0.416024019039416,2.77695581336209,0.489961987071888,0.0870592065804026,0,0,0.870806981601766,0.365446585430928,0.492692742319255,0,0.529536760149002,1.12990370390266,0,0,0,0.586654148204409,0.160317640503067,0,0,0.72045208577053,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.998395002494955,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,2.75078873194468,4.56984371832104,0,0,0,1.0063040627978,0.157611414598396,0,0,0,0,0,1.32418394073086,0.76280561296425,3.25799761052228,4.32110745600634,3.91904832131291,0,0,1.19271615249795,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0.592834895693833,0.487170393523584,0.638341257770182,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0.488105059607853,0.1251909307065,0,0.554645257684261,0,0,0.124980407962107,1.81978941049977,0,2.82318983637806,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,1.08684069813382,0,1.32920857278997,0,0.300515217994437,0,0,1.45478927362048,0.859284456339908,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0.558644917973244,0.954013051960256,0.157723490002507,0,1.41070377476274,0.918736432059601,0,1.41696576325585,0,0,0,0,0.645902582527404,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0.300841313397029,0,0,0,0,0.147856086217045,0,0.781078098613847,0.413373593002368,0,2.18789923607288,0,0,1.75871244359621,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,1.26757386311357,0.857440047187092,0,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0,0,1.86494547746733,2.7314956335032,0,0,0,0,0,2.06196181689645,0,0,0.447421727191169,0,0,0,0,0,0.971421986118279,0.233939463462106,0,0,0,0,0,0,0.874238242015829,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0.143339583151451,0,0,0,2.645134202577,0,0,0,0.378499274505237,0,0,0,0,0,0,0,0,0,0.20686599172379,0,1.66645102024618,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0.813792356631477,1.99727032255654,0,0 | |phase1_expression=0.726713517082227,2.99740733447376,0.563817616383885,3.00219895059391,0,0,15.1979926900986,2.52687949370732,5.74608382039645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.410502947249729,0.236132343941038,0,0,0,0,3.0120591877825,0,0,0,0,0,0,0,0,0.647787332037959,0,3.19876125315042,0,1.4555043671269,0,0,1.85823822537062,1.43846196161075,0,0.236482229888585,1.03423704220986,0,0,2.63539275359647,0,0.898893937780338,2.75475503133812,0,3.19668562899521,1.9791078011203,0,1.70489900213078,2.32167390902867,0,1.24564449799115,1.7587406567972,0,1.52032191293582,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87842098599313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0,0,0,0,0,1.72046919021225,0.347140501607594,0,1.25849830862972,0,0,0,0,0,1.61131726843659,2.28081631715554,4.63717909341522,0,0,0,0,0,0,0,1.64881569537367,0,0,0,0,1.64619665163954,0.264818361626438,0.860509862246441,1.41867352879343,0,0,2.71334303258876,0,0,0,0,0,0,0,1.1409436430889,2.98897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,1.46368447355514,0.795178609928912,1.51052125730374,1.14027160516907,2.01856680700503,3.28479623168247,0,2.57296375277154,5.52539685409922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.804231779293047,0,0,0,0,0,0,0,0,0,0,3.43394464837949,0,0,0.297262324577456,0,0.335964256397719,0,0.447792613514241,0.290633938513962,0,3.4486426652716,0.528290604079356,1.24396869324463,2.16179930125442,2.65109110195398,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,1.59562869950922,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.899756920638513,0,0,0,0.718874566474748,2.29723871668228,0,0.868687840005475,0,0.716243852959582,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,4.51419149591578,0,0,0,0.921845842708516,0,0,0,0,0,0,0,1.66435439510497,0,1.73675465473144,0.153461973288062,4.2099014164961,0.640695746278505,1.02341449813341,0,0,0.925258162815933,2.13074070375753,0.410635780069046,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81964233415984,0,0,0,0,0,0,0,2.26016233240486,3.30819206127675,0,0,0,0,1.42037263873893,2.478587984798,1.12678241012897,0,0,0,1.06428319221179,0,0,0,0,1.53955380360819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.852408440419239,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0,0,0,0,0,0,0,1.21537496453305,0,0.241192877250816,0,0.552896299656123,0,0,0.435753854075961,0.278847488557207,0.615602068030377,0,0,0,0,0,0,0,0,0.941881538370149,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,1.89898258075224,0.489698424477443,0,0.216388639742091,1.99052386215701,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.63186579628488,0,0,0,0,0,0,0.569219092059585,0.416024019039416,2.77695581336209,0.489961987071888,0.0870592065804026,0,0,0.870806981601766,0.365446585430928,0.492692742319255,0,0.529536760149002,1.12990370390266,0,0,0,0.586654148204409,0.160317640503067,0,0,0.72045208577053,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.998395002494955,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,2.75078873194468,4.56984371832104,0,0,0,1.0063040627978,0.157611414598396,0,0,0,0,0,1.32418394073086,0.76280561296425,3.25799761052228,4.32110745600634,3.91904832131291,0,0,1.19271615249795,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0.592834895693833,0.487170393523584,0.638341257770182,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0.488105059607853,0.1251909307065,0,0.554645257684261,0,0,0.124980407962107,1.81978941049977,0,2.82318983637806,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,1.08684069813382,0,1.32920857278997,0,0.300515217994437,0,0,1.45478927362048,0.859284456339908,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0.558644917973244,0.954013051960256,0.157723490002507,0,1.41070377476274,0.918736432059601,0,1.41696576325585,0,0,0,0,0.645902582527404,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0.300841313397029,0,0,0,0,0.147856086217045,0,0.781078098613847,0.413373593002368,0,2.18789923607288,0,0,1.75871244359621,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,1.26757386311357,0.857440047187092,0,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0,0,1.86494547746733,2.7314956335032,0,0,0,0,0,2.06196181689645,0,0,0.447421727191169,0,0,0,0,0,0.971421986118279,0.233939463462106,0,0,0,0,0,0,0.874238242015829,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0.143339583151451,0,0,0,2.645134202577,0,0,0,0.378499274505237,0,0,0,0,0,0,0,0,0,0.20686599172379,0,1.66645102024618,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0.813792356631477,1.99727032255654,0,0 | ||
|short_description=p@chrX:1508352..1508375,- | |||
}} | }} |
Latest revision as of 06:40, 1 August 2015
Short description: | p@chrX:1508352..1508375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1508352..1508375, - |
Coexpression cluster: | C4855_Adipocyte_salivary_leiomyoma_iPS_Endothelial_Osteoblast_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 4.77e-08 | 3 |
classical monocyte | 2.01e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-07 | 42 |
capillary endothelial cell | 2.18e-07 | 3 |
mast cell | 3.16e-07 | 5 |
basophil mast progenitor cell | 3.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 4.77e-08 | 3 |
hypodermis | 7.03e-08 | 5 |
microcirculatory vessel | 2.18e-07 | 3 |
endothelium of capillary | 2.18e-07 | 3 |
capillary | 2.18e-07 | 3 |
mesoderm | 2.67e-07 | 315 |
mesoderm-derived structure | 2.67e-07 | 315 |
presumptive mesoderm | 2.67e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.26e-08 | 3 |
leiomyoma | 4.26e-08 | 3 |