FFCP PHASE1:Hg19::chr5:140890918..140890946,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8716 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BT64 | |||
|association_with_transcript=393bp_to_BC004321_5end | |||
|cluster_id=chr5:140890918..140890946,+ | |||
|description=CAGE_peak_3_at_PCDHGC3_5end | |||
|id=chr5:140890918..140890946,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-17!180;CL:0000057!1.67e-08!75;CL:0000680!2.39e-07!57;CL:0000056!2.39e-07!57;CL:0000355!2.39e-07!57;CL:0000183!2.41e-07!59;CL:0000393!2.86e-07!60;CL:0000211!2.86e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-22!57;UBERON:0005068!1.05e-22!57;UBERON:0006241!1.05e-22!57;UBERON:0007135!1.05e-22!57;UBERON:0001017!1.42e-22!82;UBERON:0000475!6.22e-22!365;UBERON:0005743!2.55e-21!86;UBERON:0002616!1.76e-20!59;UBERON:0000955!6.27e-20!69;UBERON:0006238!6.27e-20!69;UBERON:0000073!3.82e-18!94;UBERON:0001016!3.82e-18!94;UBERON:0003080!1.92e-17!42;UBERON:0003075!2.57e-17!86;UBERON:0007284!2.57e-17!86;UBERON:0002780!2.78e-17!41;UBERON:0001890!2.78e-17!41;UBERON:0006240!2.78e-17!41;UBERON:0002346!1.00e-16!90;UBERON:0002020!4.12e-16!34;UBERON:0003528!4.12e-16!34;UBERON:0001893!1.42e-15!34;UBERON:0002791!1.46e-15!33;UBERON:0001869!5.88e-15!32;UBERON:0004121!1.42e-14!169;UBERON:0000924!2.29e-14!173;UBERON:0006601!2.29e-14!173;UBERON:0000033!3.67e-14!123;UBERON:0000153!1.62e-13!129;UBERON:0007811!1.62e-13!129;UBERON:0007023!3.12e-13!115;UBERON:0000483!4.67e-13!309;UBERON:0000119!5.08e-13!312;UBERON:0004111!3.97e-12!241;UBERON:0002619!5.81e-12!22;UBERON:0000025!6.62e-12!194;UBERON:0000956!8.28e-12!25;UBERON:0000203!8.28e-12!25;UBERON:0001950!4.06e-11!20;UBERON:0003056!5.33e-11!61;UBERON:0000481!1.58e-10!347;UBERON:0000477!1.87e-10!286;UBERON:0000468!3.44e-10!659;UBERON:0000914!1.09e-07!83;UBERON:0002329!1.09e-07!83;UBERON:0003077!1.09e-07!83;UBERON:0003059!1.09e-07!83;UBERON:0007282!1.09e-07!83;UBERON:0009618!1.09e-07!83;UBERON:0007285!1.09e-07!83;UBERON:0002385!1.12e-07!63;UBERON:0001015!1.12e-07!63;UBERON:0000383!1.12e-07!63;UBERON:0004290!2.04e-07!70;UBERON:0000467!2.32e-07!625;UBERON:0001134!2.44e-07!61;UBERON:0002036!2.44e-07!61;UBERON:0003082!2.44e-07!61;UBERON:0000480!3.30e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.36e-17;22!UBERON:0002791;1.86e-17;32!UBERON:0001950;2.43e-17;20!UBERON:0003528;7.86e-17;34!UBERON:0002020;7.86e-17;34!UBERON:0001869;1.71e-16;32!UBERON:0001893;1.13e-15;34!UBERON:0000956;7.34e-15;25!UBERON:0000203;7.34e-15;25!UBERON:0002780;5.72e-13;41!UBERON:0001890;5.72e-13;41!UBERON:0000073;8.41e-12;53!UBERON:0002616;8.41e-12;53!UBERON:0001017;1.37e-09;75!UBERON:0002420;5.65e-09;9!UBERON:0007245;5.65e-09;9!UBERON:0010009;5.65e-09;9!UBERON:0010011;5.65e-09;9!UBERON:0000454;5.65e-09;9!UBERON:0000955;6.29e-09;68!UBERON:0001016;2.87e-08;83!UBERON:0001871;1.95e-07;6!UBERON:0002021;4.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.00e-25,56;UBERON:0005068,8.00e-25,56;UBERON:0006241,8.00e-25,56;UBERON:0007135,8.00e-25,56;UBERON:0001017,1.48e-22,81;UBERON:0000073,9.72e-22,53;UBERON:0002616,9.72e-22,53;UBERON:0002791,6.91e-21,32;UBERON:0003528,7.69e-21,34;UBERON:0002020,7.69e-21,34;UBERON:0001893,3.28e-19,34;UBERON:0000955,3.46e-19,68;UBERON:0006238,3.46e-19,68;UBERON:0001869,3.74e-19,32;UBERON:0001016,6.47e-19,89;UBERON:0002780,7.25e-19,41;UBERON:0001890,7.25e-19,41;UBERON:0003080,7.25e-19,41;UBERON:0006240,7.25e-19,41;UBERON:0002619,1.99e-18,22;UBERON:0001950,3.21e-18,20;UBERON:0003075,1.93e-16,82;UBERON:0007284,1.93e-16,82;UBERON:0010371,1.05e-15,104;UBERON:0000956,1.40e-15,25;UBERON:0000203,1.40e-15,25;UBERON:0002346,4.13e-15,86;UBERON:0004121,1.86e-11,171;UBERON:0000924,1.86e-11,171;UBERON:0006601,1.86e-11,171;UBERON:0007023,3.19e-11,114;UBERON:0010314,1.25e-10,132;UBERON:0003056,5.32e-10,61;UBERON:0002420,1.39e-09,9;UBERON:0007245,1.39e-09,9;UBERON:0010009,1.39e-09,9;UBERON:0010011,1.39e-09,9;UBERON:0000454,1.39e-09,9;UBERON:0000025,1.36e-08,192;UBERON:0000483,5.64e-08,306;UBERON:0000119,1.03e-07,309;UBERON:0001871,1.24e-07,6;UBERON:0002021,1.80e-07,5;UBERON:0004111,2.34e-07,240;UBERON:0003076,3.64e-07,15;UBERON:0003057,3.64e-07,15;UBERON:0009663,6.64e-07,7 | |||
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| |||
|short_description=p3@PCDHGC3 | |||
}} |
Latest revision as of 04:49, 25 September 2015
Short description: | p3@PCDHGC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCDHGC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 393bp_to_BC004321_5end |
EntrezGene: | PCDHGC3 |
HGNC: | 8716 |
UniProt: | Q9BT64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data