FFCP PHASE1:Mm9::chr16:94592057..94592160,-: Difference between revisions
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{{FFCP|EntrezGene=56176|HGNC=|MCL_coexpression_id=108|UniProt=B8JK63,B8JK66,Q9JHG1|association_with_transcript=0bp_to_ENSMUST00000138514,NM_001159618,uc008aam.2_5end|description=CAGE_peak_1_at_Pigp_5end|id=chr16:94592057..94592160,-|ontology_enrichment_celltype=CL:0000221!1.82e-18!44;CL:0000133!1.82e-18!44;CL:0002319!6.96e-18!43;CL:0000540!6.18e-15!33;CL:0000047!6.18e-15!33;CL:0000031!6.18e-15!33;CL:0000404!6.18e-15!33;CL:0000055!9.58e-15!50;CL:0000393!1.78e-12!39;CL:0000211!1.78e-12!39;CL:0000117!2.51e-10!23;CL:0000337!2.51e-10!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.82e-18,44;CL:0000133,1.82e-18,44;CL:0002319,6.96e-18,43;CL:0000540,6.18e-15,33;CL:0000047,6.18e-15,33;CL:0000031,6.18e-15,33;CL:0000404,6.18e-15,33;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39;CL:0000117,2.51e-10,23;CL:0000337,2.51e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.76e-17!73;UBERON:0005743!2.76e-17!73;UBERON:0000073!4.99e-16!75;UBERON:0001016!4.99e-16!75;UBERON:0004121!7.55e-14!102;UBERON:0000924!7.55e-14!102;UBERON:0006601!7.55e-14!102;UBERON:0002346!6.42e-13!71;UBERON:0003075!6.42e-13!71;UBERON:0007284!6.42e-13!71;UBERON:0001049!1.75e-09!52;UBERON:0005068!1.75e-09!52;UBERON:0006241!1.75e-09!52;UBERON:0007135!1.75e-09!52;UBERON:0000033!3.16e-08!63;UBERON:0003056!1.06e-07!49;UBERON:0000955!3.33e-07!50;UBERON:0006238!3.33e-07!50;UBERON:0002616!3.76e-07!49;UBERON:0002780!4.83e-07!39;UBERON:0001890!4.83e-07!39;UBERON:0006240!4.83e-07!39;UBERON:0003080!9.17e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-17,73;UBERON:0001016,4.99e-16,75;UBERON:0010314,5.00e-13,92;UBERON:0004121,1.21e-12,95;UBERON:0000924,1.21e-12,95;UBERON:0006601,1.21e-12,95;UBERON:0002346,7.35e-12,64;UBERON:0003075,7.35e-12,64;UBERON:0007284,7.35e-12,64;UBERON:0010371,1.63e-09,73;UBERON:0001049,1.75e-09,52;UBERON:0005068,1.75e-09,52;UBERON:0006241,1.75e-09,52;UBERON:0007135,1.75e-09,52;UBERON:0000073,1.82e-09,54;UBERON:0003056,1.05e-07,49;UBERON:0000955,1.92e-07,47;UBERON:0006238,1.92e-07,47;UBERON:0002616,2.14e-07,46;UBERON:0002780,4.83e-07,39;UBERON:0001890,4.83e-07,39;UBERON:0006240,4.83e-07,39;UBERON:0003080,9.17e-07,40|phase1_expression=49.8062914495909,1.39590163055744,1.81999695755814,1.51232105653415,0.500895729946347,4.19698179779725,2.56973904655078,10.2007425518845,3.23814060948833,4.68129052643987,2.73948749160808,2.31339261086476,6.33442700745461,6.99363219351979,4.66353666541928,2.42970320867791,2.79824751251259,6.15151222448563,7.54129384831563,10.6097412949508,8.84450217571126,24.0284101906142,23.2467812333652,4.63978026100879,7.11168771308227,3.44539178469012,3.4460959692726,3.44753972297422,3.6104449696711,8.31699428207772,6.65191531965914,2.54012269383853,3.07532393792285,31.6963362030877,5.77703239502549,7.97926297720763,5.51257261908397,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,14.2263404312402,13.787262645854,9.9115246167308,79.8039171235,27.6891948603167,44.3766089123633,41.6079984018967,26.4574336871935,34.5006154475932,4.02678254538567,6.5282592781021,10.4189077734164,6.68874533693462,8.30946975822394,15.9858348606007,36.0123300330084,36.5003775697703,39.9313784208893,39.3059657200193,34.6824970483344,5.84934816232909,2.96659908770092,8.5257613793532,38.9480143673926,52.637907829053,30.8995044679263,32.9414489529325,25.4493203235172,53.7023850679151,41.0815486170001,24.008196646131,31.1497780809268,43.203282970671,9.91042928994498,15.9609172606485,14.2854075928306,39.3021137435978,43.1821677803374,39.068502791757,18.1468949350898,32.0774687718058,18.488587980994,30.0521157183141,32.1759998605973,42.3126742023432,3.48340489332647,7.78387069099891,17.971598299504,5.16254326188832,2.719885334831,2.69851595818909,1.29955283489534,1.34408066129201,7.3031098468511,25.5645483867087,29.0960325155213,23.6737514921928,33.8024207464033,29.5150898052931,17.8363667794652,0,11.0410430915719,10.6411143499541,8.08839112023653,5.59501010623394,5.17875767294343,18.4068252440383,18.7364152907427,19.7902560902892,16.3737003051802,23.6634545667617,16.5800077061344,13.948991637594,6.17987419335935,4.916378135277,2.65383165584962,20.0590893934787,5.52103796150984,6.30337829075789,1.86391761218122,14.9318206475889,15.7085030110091,3.0654846625031,11.2626217035565,10.1983464268879,9.02198612218759,9.58660092190865,17.3850229071078,28.2722292253945,9.38651329038293,11.2514801225345,11.2205544062162,15.5751612545047,27.5984676034357,8.9573018839267,18.1960386072246,6.31325567659422,16.9156575851515,26.6686441142829,22.3277040958633,25.6198190320716,16.805015290378,19.2170580427275,21.1765897504987,9.57202471734358,11.8562396113063,14.3720620927543,19.0027214097065,23.8923348346057,19.1852601965663,18.805616992197,16.4625709126355,27.0686602873151,4.91549231119264,3.86021860672073,3.12579849335152,14.2916783049496,20.1692411583743,18.7264543919455,17.0456209621351,14.3637889175605,18.6663206593728,14.1845706297749,13.1453966685813,18.3321587516456,15.13950619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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56176 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=B8JK63,B8JK66,Q9JHG1 | |||
|association_with_transcript=0bp_to_ENSMUST00000138514,NM_001159618,uc008aam.2_5end | |||
|cluster_id=chr16:94592057..94592160,- | |||
|description=CAGE_peak_1_at_Pigp_5end | |||
|id=chr16:94592057..94592160,- | |||
|ontology_enrichment_celltype=CL:0000221!1.82e-18!44;CL:0000133!1.82e-18!44;CL:0002319!6.96e-18!43;CL:0000540!6.18e-15!33;CL:0000047!6.18e-15!33;CL:0000031!6.18e-15!33;CL:0000404!6.18e-15!33;CL:0000055!9.58e-15!50;CL:0000393!1.78e-12!39;CL:0000211!1.78e-12!39;CL:0000117!2.51e-10!23;CL:0000337!2.51e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.82e-18,44;CL:0000133,1.82e-18,44;CL:0002319,6.96e-18,43;CL:0000540,6.18e-15,33;CL:0000047,6.18e-15,33;CL:0000031,6.18e-15,33;CL:0000404,6.18e-15,33;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39;CL:0000117,2.51e-10,23;CL:0000337,2.51e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.76e-17!73;UBERON:0005743!2.76e-17!73;UBERON:0000073!4.99e-16!75;UBERON:0001016!4.99e-16!75;UBERON:0004121!7.55e-14!102;UBERON:0000924!7.55e-14!102;UBERON:0006601!7.55e-14!102;UBERON:0002346!6.42e-13!71;UBERON:0003075!6.42e-13!71;UBERON:0007284!6.42e-13!71;UBERON:0001049!1.75e-09!52;UBERON:0005068!1.75e-09!52;UBERON:0006241!1.75e-09!52;UBERON:0007135!1.75e-09!52;UBERON:0000033!3.16e-08!63;UBERON:0003056!1.06e-07!49;UBERON:0000955!3.33e-07!50;UBERON:0006238!3.33e-07!50;UBERON:0002616!3.76e-07!49;UBERON:0002780!4.83e-07!39;UBERON:0001890!4.83e-07!39;UBERON:0006240!4.83e-07!39;UBERON:0003080!9.17e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-17,73;UBERON:0001016,4.99e-16,75;UBERON:0010314,5.00e-13,92;UBERON:0004121,1.21e-12,95;UBERON:0000924,1.21e-12,95;UBERON:0006601,1.21e-12,95;UBERON:0002346,7.35e-12,64;UBERON:0003075,7.35e-12,64;UBERON:0007284,7.35e-12,64;UBERON:0010371,1.63e-09,73;UBERON:0001049,1.75e-09,52;UBERON:0005068,1.75e-09,52;UBERON:0006241,1.75e-09,52;UBERON:0007135,1.75e-09,52;UBERON:0000073,1.82e-09,54;UBERON:0003056,1.05e-07,49;UBERON:0000955,1.92e-07,47;UBERON:0006238,1.92e-07,47;UBERON:0002616,2.14e-07,46;UBERON:0002780,4.83e-07,39;UBERON:0001890,4.83e-07,39;UBERON:0006240,4.83e-07,39;UBERON:0003080,9.17e-07,40 | |||
|phase1_expression=49.8062914495909,1.39590163055744,1.81999695755814,1.51232105653415,0.500895729946347,4.19698179779725,2.56973904655078,10.2007425518845,3.23814060948833,4.68129052643987,2.73948749160808,2.31339261086476,6.33442700745461,6.99363219351979,4.66353666541928,2.42970320867791,2.79824751251259,6.15151222448563,7.54129384831563,10.6097412949508,8.84450217571126,24.0284101906142,23.2467812333652,4.63978026100879,7.11168771308227,3.44539178469012,3.4460959692726,3.44753972297422,3.6104449696711,8.31699428207772,6.65191531965914,2.54012269383853,3.07532393792285,31.6963362030877,5.77703239502549,7.97926297720763,5.51257261908397,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,14.2263404312402,13.787262645854,9.9115246167308,79.8039171235,27.6891948603167,44.3766089123633,41.6079984018967,26.4574336871935,34.5006154475932,4.02678254538567,6.5282592781021,10.4189077734164,6.68874533693462,8.30946975822394,15.9858348606007,36.0123300330084,36.5003775697703,39.9313784208893,39.3059657200193,34.6824970483344,5.84934816232909,2.96659908770092,8.5257613793532,38.9480143673926,52.637907829053,30.8995044679263,32.9414489529325,25.4493203235172,53.7023850679151,41.0815486170001,24.008196646131,31.1497780809268,43.203282970671,9.91042928994498,15.9609172606485,14.2854075928306,39.3021137435978,43.1821677803374,39.068502791757,18.1468949350898,32.0774687718058,18.488587980994,30.0521157183141,32.1759998605973,42.3126742023432,3.48340489332647,7.78387069099891,17.971598299504,5.16254326188832,2.719885334831,2.69851595818909,1.29955283489534,1.34408066129201,7.3031098468511,25.5645483867087,29.0960325155213,23.6737514921928,33.8024207464033,29.5150898052931,17.8363667794652,0,11.0410430915719,10.6411143499541,8.08839112023653,5.59501010623394,5.17875767294343,18.4068252440383,18.7364152907427,19.7902560902892,16.3737003051802,23.6634545667617,16.5800077061344,13.948991637594,6.17987419335935,4.916378135277,2.65383165584962,20.0590893934787,5.52103796150984,6.30337829075789,1.86391761218122,14.9318206475889,15.7085030110091,3.0654846625031,11.2626217035565,10.1983464268879,9.02198612218759,9.58660092190865,17.3850229071078,28.2722292253945,9.38651329038293,11.2514801225345,11.2205544062162,15.5751612545047,27.5984676034357,8.9573018839267,18.1960386072246,6.31325567659422,16.9156575851515,26.6686441142829,22.3277040958633,25.6198190320716,16.805015290378,19.2170580427275,21.1765897504987,9.57202471734358,11.8562396113063,14.3720620927543,19.0027214097065,23.8923348346057,19.1852601965663,18.805616992197,16.4625709126355,27.0686602873151,4.91549231119264,3.86021860672073,3.12579849335152,14.2916783049496,20.1692411583743,18.7264543919455,17.0456209621351,14.3637889175605,18.6663206593728,14.1845706297749,13.1453966685813,18.3321587516456,15.1395061920402,11.4917224855367,9.97146357414026,13.8889988054066,14.0512073786272,12.3469905259542,13.4585567081041,19.3460671273055,0.660837565967596,2.11560453330835,19.6225190492415,16.953277045812,12.371276286921,9.27744213267376,8.67274370994994,10.8428606884159,6.16887780007865,8.89374355509659,10.304743560811,6.36660710531683,8.77338392036041,5.39291645192533,3.8904848977445,4.58024928485045,19.5357937981674,19.8792411940928,11.270773567308,17.514014194697,14.9343415119072,17.8846340720312,16.6944458008039,7.38050739898011,7.22194148070324,8.76119863844784,2.37162101669719,4.17112764290235,8.05891879964132,5.62155280962134,3.65148218499305,3.85883455603867,4.58326533206556,6.32931502391783,6.16113861745134,3.84385978463314,11.5014565221884,10.0478055870496,9.04909252032226,4.2938409251009,2.51156378930677,5.30687873499704,10.9004382198297,27.0972718831793,17.1113225264127,17.3139987490692,15.4895563870411,17.9231695462743,15.2347930167049,14.4398899414771,14.5024332577696,15.2810635857655,17.3805697836661,8.68475567993411,13.4694285855399,10.5593812764503,3.01582567878545,4.35124547054968,1.96705709207614,3.03530420935206,13.3256989689867,11.9555920324047,12.9508606847574,12.6235463602186,34.0748876969557,32.7968545209176,28.4358885007295,25.8086301788756,24.9534514972281,18.6830510320629,25.5030742055183,34.1939353756235,28.8560077900962,16.0660658210904,12.6326675835359,23.8607908914122,29.1567657242901,13.5275500837479,3.98235415019888,20.1507928008635,21.4649725444973,13.9567759019365,7.97315110778086,15.3717573971964,14.2135561242522,14.1778154496227,15.6858846489277,4.74055136903724,1.05418608574999,3.09406629744561,27.9160476718106,29.5300194211349,35.7029967240402,43.08174404135,49.3005849525521,42.6301474068949,41.4663531917345,28.6197052167723,4.92810586933792,11.6507638975101,4.41056796109924,4.9465875882444,11.6254387221052,7.41848976616317,5.72987251215055,5.25250879184196,2.91480836629851,9.82754100655701,3.07567585436135,14.4470807574256,8.88933731374616,3.57900068308913,2.1871076435364,4.80434163733698,21.9272174692073,21.692475110167,22.5265957301211,5.72802370809068,19.770999598821,14.6390016331331,17.7128758947754,15.2634456090562,14.4119292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| |||
|short_description=p1@Pigp | |||
}} |
Latest revision as of 21:30, 25 September 2015
Short description: | p1@Pigp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pigp_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000138514, NM_001159618, uc008aam.2_5end |
EntrezGene: | Pigp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.82e-18 | 44 |
neurectodermal cell | 1.82e-18 | 44 |
neural cell | 6.96e-18 | 43 |
neuron | 6.18e-15 | 33 |
neuronal stem cell | 6.18e-15 | 33 |
neuroblast | 6.18e-15 | 33 |
electrically signaling cell | 6.18e-15 | 33 |
electrically responsive cell | 1.78e-12 | 39 |
electrically active cell | 1.78e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.51e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.76e-17 | 73 |
nervous system | 4.99e-16 | 75 |
structure with developmental contribution from neural crest | 5.00e-13 | 92 |
ectoderm-derived structure | 1.21e-12 | 95 |
ectoderm | 1.21e-12 | 95 |
presumptive ectoderm | 1.21e-12 | 95 |
neurectoderm | 7.35e-12 | 64 |
neural plate | 7.35e-12 | 64 |
presumptive neural plate | 7.35e-12 | 64 |
ecto-epithelium | 1.63e-09 | 73 |
neural tube | 1.75e-09 | 52 |
neural rod | 1.75e-09 | 52 |
future spinal cord | 1.75e-09 | 52 |
neural keel | 1.75e-09 | 52 |
regional part of nervous system | 1.82e-09 | 54 |
pre-chordal neural plate | 1.05e-07 | 49 |
brain | 1.92e-07 | 47 |
future brain | 1.92e-07 | 47 |
regional part of brain | 2.14e-07 | 46 |
regional part of forebrain | 4.83e-07 | 39 |
forebrain | 4.83e-07 | 39 |
future forebrain | 4.83e-07 | 39 |
anterior neural tube | 9.17e-07 | 40 |