FFCP PHASE1:Hg19::chr5:136834263..136834288,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |||
|TSSclassifier=strong | |||
|UniProt=D6RB21 | |||
|association_with_transcript=0bp_to_ENST00000505690_5end | |||
|cluster_id=chr5:136834263..136834288,- | |||
|description=CAGE_peak_3_at_SPOCK1_5end | |||
|id=chr5:136834263..136834288,- | |||
|ontology_enrichment_celltype=CL:0000055!9.45e-12!180;CL:0000680!5.55e-09!57;CL:0000056!5.55e-09!57;CL:0000355!5.55e-09!57;CL:0000187!6.23e-08!54;CL:0002334!1.03e-07!12;CL:0000057!1.25e-07!75;CL:0000359!1.28e-07!32;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60;CL:0000183!1.80e-07!59;CL:0000222!5.37e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.30e-21!194;UBERON:0000483!8.04e-21!309;UBERON:0000119!3.72e-20!312;UBERON:0001049!2.27e-18!57;UBERON:0005068!2.27e-18!57;UBERON:0006241!2.27e-18!57;UBERON:0007135!2.27e-18!57;UBERON:0004111!6.97e-17!241;UBERON:0002616!1.13e-16!59;UBERON:0002780!2.52e-16!41;UBERON:0001890!2.52e-16!41;UBERON:0006240!2.52e-16!41;UBERON:0003080!1.25e-15!42;UBERON:0000477!1.50e-15!286;UBERON:0001893!1.59e-15!34;UBERON:0002020!3.16e-15!34;UBERON:0003528!3.16e-15!34;UBERON:0002791!6.11e-15!33;UBERON:0003075!1.75e-14!86;UBERON:0007284!1.75e-14!86;UBERON:0001869!6.61e-14!32;UBERON:0001017!3.39e-13!82;UBERON:0001981!3.91e-13!60;UBERON:0007500!3.91e-13!60;UBERON:0004537!3.91e-13!60;UBERON:0006965!3.91e-13!60;UBERON:0002346!5.18e-13!90;UBERON:0000955!1.50e-12!69;UBERON:0006238!1.50e-12!69;UBERON:0005743!2.63e-12!86;UBERON:0004872!3.52e-12!84;UBERON:0003056!5.13e-12!61;UBERON:0000073!1.21e-11!94;UBERON:0001016!1.21e-11!94;UBERON:0002049!2.20e-11!79;UBERON:0007798!2.20e-11!79;UBERON:0001637!2.26e-11!42;UBERON:0003509!2.26e-11!42;UBERON:0004572!2.26e-11!42;UBERON:0000055!4.90e-11!69;UBERON:0000475!4.94e-10!365;UBERON:0000956!5.16e-10!25;UBERON:0000203!5.16e-10!25;UBERON:0001950!2.16e-09!20;UBERON:0004535!2.62e-09!110;UBERON:0002619!3.08e-09!22;UBERON:0000486!4.80e-09!82;UBERON:0001009!1.30e-08!113;UBERON:0007023!3.44e-08!115;UBERON:0004573!4.04e-08!33;UBERON:0004571!4.04e-08!33;UBERON:0001134!4.09e-08!61;UBERON:0002036!4.09e-08!61;UBERON:0003082!4.09e-08!61;UBERON:0000914!4.66e-08!83;UBERON:0002329!4.66e-08!83;UBERON:0003077!4.66e-08!83;UBERON:0003059!4.66e-08!83;UBERON:0007282!4.66e-08!83;UBERON:0009618!4.66e-08!83;UBERON:0007285!4.66e-08!83;UBERON:0003914!4.86e-08!118;UBERON:0004290!8.85e-08!70;UBERON:0000468!1.49e-07!659;UBERON:0002385!1.66e-07!63;UBERON:0001015!1.66e-07!63;UBERON:0000383!1.66e-07!63;UBERON:0000467!2.21e-07!625;UBERON:0000480!2.79e-07!626;UBERON:0002420!3.68e-07!9;UBERON:0007245!3.68e-07!9;UBERON:0010009!3.68e-07!9;UBERON:0010011!3.68e-07!9;UBERON:0000454!3.68e-07!9;UBERON:0000947!4.79e-07!21;UBERON:0010191!4.79e-07!21;UBERON:0000033!5.20e-07!123;UBERON:0002308!5.52e-07!9;UBERON:0000125!5.52e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.83e-10;41!UBERON:0001890;1.83e-10;41!UBERON:0001893;7.03e-09;34!UBERON:0002791;2.83e-08;32!UBERON:0000073;1.80e-07;53!UBERON:0002616;1.80e-07;53!UBERON:0004573;2.91e-07;33!UBERON:0004571;2.91e-07;33!UBERON:0001950;5.09e-07;20!UBERON:0001869;5.42e-07;32!UBERON:0003528;8.61e-07;34!UBERON:0002020;8.61e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.91e-13,41;UBERON:0001890,3.91e-13,41;UBERON:0003080,3.91e-13,41;UBERON:0006240,3.91e-13,41;UBERON:0001049,3.67e-12,56;UBERON:0005068,3.67e-12,56;UBERON:0006241,3.67e-12,56;UBERON:0007135,3.67e-12,56;UBERON:0000073,1.24e-11,53;UBERON:0002616,1.24e-11,53;UBERON:0000025,2.04e-11,192;UBERON:0003056,8.86e-11,61;UBERON:0003075,1.84e-09,82;UBERON:0007284,1.84e-09,82;UBERON:0001893,2.02e-09,34;UBERON:0000955,7.44e-09,68;UBERON:0006238,7.44e-09,68;UBERON:0001016,7.66e-09,89;UBERON:0010314,8.66e-09,132;UBERON:0002346,9.35e-09,86;UBERON:0000483,1.39e-08,306;UBERON:0002791,1.51e-08,32;UBERON:0001017,1.98e-08,81;UBERON:0000119,2.23e-08,309;UBERON:0004111,3.52e-08,240;UBERON:0003528,6.81e-08,34;UBERON:0002020,6.81e-08,34;UBERON:0010371,9.29e-08,104;UBERON:0001637,1.02e-07,42;UBERON:0003509,1.02e-07,42;UBERON:0004572,1.02e-07,42;UBERON:0004573,1.22e-07,33;UBERON:0004571,1.22e-07,33;UBERON:0001869,4.27e-07,32;UBERON:0007023,9.85e-07,114 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.434539556882471,0,1.94653948121054,0.378139268656271,1.10864698731282,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,2.26123176769604,0.838998872419812,0.550236083880135,0.835979866147242,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0.898117490504679,0.337834441449967,1.53316637465883,3.79706263827252,0.732806975721629,0,0,0,2.98183171017191,1.77282716330412,0.794455084879313,8.03142538096678,1.41867352879343,1.12135520028461,2.1349799145941,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,1.82032272387605,0,0,0,0,0,0.30648779579902,0.600952235626387,0.453728732640084,0,0.427114777637135,0.211931901159562,0.900273288253207,0.412210116953756,1.54584324027377,0,0,0.487185025805993,0,0.276149695926898,0.646584227275248,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.98775256867763,0,0,0.185176890317059,0,0,0,1.39116485970092,0.939269553886573,0,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49033632546,0,0,1.86156681609409,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.958499421966331,0,2.85273810081437,0.579125226670317,1.43833425785268,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.623912584592421,2.67643483195743,1.10391690523754,2.10854546986884,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,0.460385919864187,0.280660094433074,1.15325234330131,0.511707249066704,1.60853921143608,1.48418066444991,0.462629081407967,1.24293207719189,0.98552587216571,0.519254429183621,0.464841513839837,0,1.00253235151642,0,0.459257792658427,0,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0.386682873168488,0.154048617114644,0.307007349452259,0,0.107420244868274,0.435050081742686,0.170453254832202,0.267096106940212,1.32227932288782,1.92190067365106,1.14851441245126,0.50578890427775,1.39453664789186,5.98143458978216,0.6970372701606,1.23213432070436,0.532306030317022,0.869932992075073,2.22389062924704,2.43312307461385,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0,1.41527737101321,0,0.421258456238981,0,1.46228093778771,0,0.682499557039929,0.989838023675989,0,0,0,0.438450885253763,0.578775534266688,0,0.811641507850816,0.30982349809975,3.09865162785466,0.286822704408103,0.0982490410131212,1.426684205925,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,1.1253553312841,1.00177834520615,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.197286811273867,0,0,0,1.57705766875147,0,0,0,0,0,0,1.65471377237555,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,1.18219047581419,1.09692698576986,0,0,0.384751292518985,0.341826167541004,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,2.96564985114979,0,3.04543779442941,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.274083849293502,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,1.64286454670392,0,7.30601250413927,0,0.279282401272254,0.229160424011684,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0.0846733320657845,0,0.953423842781029,0,0.137539436597234,0.415440338029185,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0.566560457600628,0,0,0.904980694530854,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.751145584238999,0.573409195690071,0.665574309221114,0.931446044120752,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.701139929541673,0,1.13641803165053,0.754703705257725,0.889811221596536,1.37304041038154,0.453692771289717,1.08806040407946,0.887130899937803,0.955780602982214,0,0.621051827505038,1.65882483136342,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| |||
|short_description=p3@SPOCK1 | |||
}} |
Latest revision as of 20:51, 24 September 2015
Short description: | p3@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPOCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505690_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | D6RB21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.91e-13 | 41 |
forebrain | 3.91e-13 | 41 |
anterior neural tube | 3.91e-13 | 41 |
future forebrain | 3.91e-13 | 41 |
neural tube | 3.67e-12 | 56 |
neural rod | 3.67e-12 | 56 |
future spinal cord | 3.67e-12 | 56 |
neural keel | 3.67e-12 | 56 |
regional part of nervous system | 1.24e-11 | 53 |
regional part of brain | 1.24e-11 | 53 |
tube | 2.04e-11 | 192 |
pre-chordal neural plate | 8.86e-11 | 61 |
neural plate | 1.84e-09 | 82 |
presumptive neural plate | 1.84e-09 | 82 |
telencephalon | 2.02e-09 | 34 |
brain | 7.44e-09 | 68 |
future brain | 7.44e-09 | 68 |
nervous system | 7.66e-09 | 89 |
structure with developmental contribution from neural crest | 8.66e-09 | 132 |
neurectoderm | 9.35e-09 | 86 |
epithelium | 1.39e-08 | 306 |
regional part of telencephalon | 1.51e-08 | 32 |
central nervous system | 1.98e-08 | 81 |
cell layer | 2.23e-08 | 309 |
anatomical conduit | 3.52e-08 | 240 |
brain grey matter | 6.81e-08 | 34 |
gray matter | 6.81e-08 | 34 |
ecto-epithelium | 9.29e-08 | 104 |
artery | 1.02e-07 | 42 |
arterial blood vessel | 1.02e-07 | 42 |
arterial system | 1.02e-07 | 42 |
systemic artery | 1.22e-07 | 33 |
systemic arterial system | 1.22e-07 | 33 |
cerebral hemisphere | 4.27e-07 | 32 |
adult organism | 9.85e-07 | 114 |