FFCP PHASE1:Hg19::chrX:1435588..1435602,-: Difference between revisions
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|id=chrX:1435588..1435602,-
|short_description=p@chrX:1435588..1435602,-
|description=CAGE_peak_at_chrX:1435588..1435602,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:1435588..1435602,- | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_at_chrX:1435588..1435602,- | |||
|id=chrX:1435588..1435602,- | |||
|ontology_enrichment_celltype=CL:0002057!2.69e-75!42;CL:0000860!4.22e-70!45;CL:0002194!1.73e-48!63;CL:0000576!1.73e-48!63;CL:0000040!1.73e-48!63;CL:0000559!1.73e-48!63;CL:0002009!6.16e-47!65;CL:0000766!2.65e-44!76;CL:0000839!1.94e-43!70;CL:0000557!8.52e-43!71;CL:0000763!1.84e-32!112;CL:0000049!1.84e-32!112;CL:0002087!1.52e-24!119;CL:0002031!1.91e-23!124;CL:0000738!7.08e-23!140;CL:0002032!3.83e-21!165;CL:0000837!3.83e-21!165;CL:0000037!3.64e-20!172;CL:0000566!3.64e-20!172;CL:0000988!6.78e-19!182;CL:0000134!4.05e-09!358;CL:0002320!7.00e-09!365;CL:0000219!4.86e-08!390;CL:0000048!4.98e-07!430;CL:0000723!6.94e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-88;33!CL:0002057;3.68e-88;33!CL:0000473;5.03e-65;39!CL:0000234;5.03e-65;39!CL:0000576;4.76e-43;48!CL:0000766;6.87e-27;69!CL:0002087;7.64e-15;104!CL:0000763;8.11e-15;100!CL:0000738;5.29e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.45e-78,42;CL:0002057,2.45e-78,42;CL:0000473,2.73e-68,48;CL:0000234,2.73e-68,48;CL:0002194,3.25e-54,59;CL:0000576,3.25e-54,59;CL:0000040,3.25e-54,59;CL:0000559,3.25e-54,59;CL:0002009,2.13e-52,61;CL:0000766,2.35e-49,72;CL:0000839,2.50e-48,66;CL:0000557,1.38e-47,67;CL:0000763,2.52e-32,108;CL:0000049,2.52e-32,108;CL:0002087,5.63e-27,115;CL:0002031,9.11e-26,120;CL:0000738,2.99e-25,136;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-54;42!CL:0000049;1.47e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.87e-38!80;UBERON:0001474!6.17e-35!86;UBERON:0004765!2.21e-29!101;UBERON:0001434!2.21e-29!101;UBERON:0002390!4.54e-29!102;UBERON:0003061!4.54e-29!102;UBERON:0002193!3.05e-26!112;UBERON:0002405!1.73e-25!115;UBERON:0002204!1.09e-16!167;UBERON:0003081!3.10e-12!216;UBERON:0002384!1.48e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.02e-42,76;UBERON:0001474,1.36e-38,82;UBERON:0004765,5.25e-35,90;UBERON:0002405,8.09e-34,93;UBERON:0002390,5.36e-32,98;UBERON:0003061,5.36e-32,98;UBERON:0001434,2.55e-31,100;UBERON:0002193,7.44e-29,108;UBERON:0002204,6.70e-18,167;UBERON:0003081,2.59e-14,203;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315;UBERON:0002384,1.05e-07,371 | |||
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|short_description=p@chrX:1435588..1435602,- | |||
}} | }} |
Latest revision as of 06:27, 1 August 2015
Short description: | p@chrX:1435588..1435602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1435588..1435602, - |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.45e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-78 | 42 |
defensive cell | 2.73e-68 | 48 |
phagocyte | 2.73e-68 | 48 |
monopoietic cell | 3.25e-54 | 59 |
monocyte | 3.25e-54 | 59 |
monoblast | 3.25e-54 | 59 |
promonocyte | 3.25e-54 | 59 |
macrophage dendritic cell progenitor | 2.13e-52 | 61 |
myeloid leukocyte | 2.35e-49 | 72 |
myeloid lineage restricted progenitor cell | 2.50e-48 | 66 |
granulocyte monocyte progenitor cell | 1.38e-47 | 67 |
myeloid cell | 2.52e-32 | 108 |
common myeloid progenitor | 2.52e-32 | 108 |
nongranular leukocyte | 5.63e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 9.11e-26 | 120 |
leukocyte | 2.99e-25 | 136 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.02e-42 | 76 |
bone element | 1.36e-38 | 82 |
skeletal element | 5.25e-35 | 90 |
immune system | 8.09e-34 | 93 |
hematopoietic system | 5.36e-32 | 98 |
blood island | 5.36e-32 | 98 |
skeletal system | 2.55e-31 | 100 |
hemolymphoid system | 7.44e-29 | 108 |
musculoskeletal system | 6.70e-18 | 167 |
lateral plate mesoderm | 2.59e-14 | 203 |
mesoderm | 2.47e-08 | 315 |
mesoderm-derived structure | 2.47e-08 | 315 |
presumptive mesoderm | 2.47e-08 | 315 |
connective tissue | 1.05e-07 | 371 |