FFCP PHASE1:Hg19::chrX:141293047..141293082,-: Difference between revisions
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|id=chrX:141293047..141293082,-
|short_description=p1@MAGEC2
|description=CAGE_peak_1_at_MAGEC2_5end
|association_with_transcript=0bp_to_ENST00000247452,NM_016249,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51438 | |EntrezGene=51438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13574 | |HGNC=13574 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBF1 | |UniProt=Q9UBF1 | ||
|association_with_transcript=0bp_to_ENST00000247452,NM_016249,uc004fbu.1_5end | |||
|cluster_id=chrX:141293047..141293082,- | |||
|coexpression_cluster_id=C4854 | |||
|description=CAGE_peak_1_at_MAGEC2_5end | |||
|id=chrX:141293047..141293082,- | |||
|ontology_enrichment_celltype=CL:0000054!9.22e-07!2;CL:0000137!9.22e-07!2;CL:0000092!9.22e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.22e-10;2!CL:0000137;2.22e-10;2!CL:0000092;2.22e-10;2!CL:1000415;5.88e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.22e-10,2;CL:0000137,2.22e-10,2;CL:0000092,2.22e-10,2;CL:1000415,6.58e-10,2;CL:0000062,7.79e-07,11;CL:0000375,7.79e-07,11;CL:0000335,7.79e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;7.79e-07;11 | |||
|ontology_enrichment_disease=DOID:14566!3.53e-18!239;DOID:162!5.34e-17!235;DOID:0050687!2.02e-10!143;DOID:0050686!9.82e-09!137;DOID:1036!1.23e-08!8;DOID:201!1.62e-07!6;DOID:0060100!1.62e-07!6;DOID:200!9.22e-07!2;DOID:4305!9.22e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.55e-14;8!DOID:201;3.88e-12;6!DOID:0060100;3.88e-12;6!DOID:200;2.22e-10;2!DOID:4305;2.22e-10;2!DOID:1115;6.75e-10;20!DOID:4231;1.66e-09;2!DOID:1907;1.66e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.14e-15,235;DOID:14566,9.41e-15,239;DOID:1036,3.55e-14,8;DOID:201,4.23e-12,6;DOID:0060100,4.23e-12,6;DOID:200,2.22e-10,2;DOID:4305,2.22e-10,2;DOID:0050686,3.79e-10,137;DOID:1115,6.95e-10,20;DOID:4231,1.90e-09,2;DOID:1907,1.90e-09,2;DOID:2531,1.95e-08,51;DOID:0060083,1.95e-08,51;DOID:0050687,9.85e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.43e-08;18!UBERON:0002110;6.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,7.17e-07,3;UBERON:0006242,7.17e-07,3 | |||
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| ||
|short_description=p1@MAGEC2 | |||
}} | }} |
Latest revision as of 19:46, 19 September 2015
Short description: | p1@MAGEC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGEC2_5end |
Coexpression cluster: | C4854_bone_adenocarcinoma_thyroid_squamous_fibrous_gall_cholangiocellular |
Association with transcript: | 0bp_to_ENST00000247452, NM_016249, uc004fbu.1_5end |
EntrezGene: | MAGEC2 |
HGNC: | 13574 |
UniProt: | Q9UBF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.22e-10 | 2 |
osteocyte | 2.22e-10 | 2 |
osteoclast | 2.22e-10 | 2 |
epithelial cell of gall bladder | 6.58e-10 | 2 |
osteoblast | 7.79e-07 | 11 |
osteoprogenitor cell | 7.79e-07 | 11 |
mesenchyme condensation cell | 7.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 7.17e-07 | 3 |
gall bladder primordium | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.14e-15 | 235 |
disease of cellular proliferation | 9.41e-15 | 239 |
chronic leukemia | 3.55e-14 | 8 |
connective tissue cancer | 4.23e-12 | 6 |
musculoskeletal system cancer | 4.23e-12 | 6 |
giant cell tumor | 2.22e-10 | 2 |
bone giant cell tumor | 2.22e-10 | 2 |
organ system cancer | 3.79e-10 | 137 |
sarcoma | 6.95e-10 | 20 |
histiocytoma | 1.90e-09 | 2 |
malignant fibroxanthoma | 1.90e-09 | 2 |
hematologic cancer | 1.95e-08 | 51 |
immune system cancer | 1.95e-08 | 51 |
cell type cancer | 9.85e-07 | 143 |