FFCP PHASE1:Hg19::chrX:140271215..140271238,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:140271215..140271238,-
|short_description=p5@LDOC1
|description=CAGE_peak_5_at_LDOC1_5end
|association_with_transcript=-14bp_to_ENST00000460721_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23641 | |EntrezGene=23641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6548 | |HGNC=6548 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000460721_5end | |||
|cluster_id=chrX:140271215..140271238,- | |||
|description=CAGE_peak_5_at_LDOC1_5end | |||
|id=chrX:140271215..140271238,- | |||
|ontology_enrichment_celltype=CL:0000222!2.12e-20!119;CL:0000183!3.20e-16!59;CL:0000192!1.43e-15!42;CL:0000514!1.43e-15!42;CL:0000359!4.29e-15!32;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000187!3.34e-14!54;CL:0000055!4.84e-14!180;CL:0000393!2.06e-12!60;CL:0000211!2.06e-12!60;CL:0000220!1.10e-09!246;CL:0002321!3.59e-09!248;CL:0000213!3.09e-07!57;CL:0000215!3.09e-07!57;CL:0002539!3.65e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.94e-15;32!CL:0000192;6.85e-11;43!CL:0002539;7.04e-08;10!CL:1000449;4.97e-07;15!CL:0000187;5.68e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.50e-19,121;CL:0000359,2.12e-15,32;CL:0000192,1.51e-14,43;CL:0000514,1.51e-14,43;CL:0000680,1.80e-13,58;CL:0000056,1.80e-13,58;CL:0000355,1.80e-13,58;CL:0000187,6.52e-13,55;CL:0000393,1.30e-10,61;CL:0000211,1.30e-10,61;CL:0002321,1.86e-08,250;CL:0002539,9.78e-08,10;CL:1000449,3.69e-07,15;CL:0000213,9.18e-07,58;CL:0000215,9.18e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.85e-11;43!CL:0000355;2.43e-07;58!CL:0000222;9.83e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.87e-16;33!UBERON:0004571;3.87e-16;33!UBERON:0001637;5.91e-16;42!UBERON:0003509;5.91e-16;42!UBERON:0004572;5.91e-16;42!UBERON:0007500;3.59e-14;56!UBERON:0001981;3.59e-14;56!UBERON:0004537;3.59e-14;56!UBERON:0003914;5.42e-13;74!UBERON:0000947;1.54e-11;21!UBERON:0010191;1.54e-11;21!UBERON:0000055;1.57e-10;65!UBERON:0002049;1.80e-09;75!UBERON:0007798;1.80e-09;75!UBERON:0000025;7.88e-09;93!UBERON:0004237;7.04e-08;10!UBERON:0004695;7.04e-08;10!UBERON:0002111;7.04e-08;10!UBERON:0004178;7.04e-08;10!UBERON:0006555;4.97e-07;15!UBERON:0004819;4.97e-07;15!UBERON:0001285;4.97e-07;15!UBERON:0007684;4.97e-07;15 | |||
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| ||
|short_description=p5@LDOC1 | |||
}} | }} |
Latest revision as of 19:33, 19 September 2015
Short description: | p5@LDOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDOC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000460721_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.50e-19 | 121 |
vascular associated smooth muscle cell | 2.12e-15 | 32 |
smooth muscle cell | 1.51e-14 | 43 |
smooth muscle myoblast | 1.51e-14 | 43 |
muscle precursor cell | 1.80e-13 | 58 |
myoblast | 1.80e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-13 | 58 |
muscle cell | 6.52e-13 | 55 |
electrically responsive cell | 1.30e-10 | 61 |
electrically active cell | 1.30e-10 | 61 |
embryonic cell | 1.86e-08 | 250 |
aortic smooth muscle cell | 9.78e-08 | 10 |
epithelial cell of nephron | 3.69e-07 | 15 |
lining cell | 9.18e-07 | 58 |
barrier cell | 9.18e-07 | 58 |