FFCP PHASE1:Hg19::chr5:121400881..121400901,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:121400881..121400901,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121400881..121400901,- | |||
|id=chr5:121400881..121400901,- | |||
|ontology_enrichment_celltype=CL:0000055!1.58e-27!180;CL:0000057!2.36e-22!75;CL:0002620!2.94e-12!23;CL:0000144!6.38e-11!625;CL:0000048!5.09e-10!430;CL:0000222!5.49e-10!119;CL:0000723!2.28e-09!436;CL:0000680!2.69e-09!57;CL:0000056!2.69e-09!57;CL:0000355!2.69e-09!57;CL:0002334!5.37e-09!12;CL:0000034!5.88e-09!444;CL:0002371!3.43e-08!591;CL:0000187!4.36e-08!54;CL:0000012!5.40e-08!682;CL:0000548!8.26e-08!679;CL:0000004!8.26e-08!679;CL:0000255!8.26e-08!679;CL:0000393!5.13e-07!60;CL:0000211!5.13e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:1000306;3.90e-09;4!CL:0002547;3.90e-09;4!CL:0000153;8.92e-09;9!CL:0000447;8.92e-09;9!CL:0000327;2.02e-08;15!CL:0000135;2.07e-08;3!CL:0000388;2.07e-08;3!CL:0002334;6.62e-08;12!CL:0002620;8.26e-08;23!CL:0000499;9.79e-08;28!CL:0000151;4.08e-07;36!CL:0002580;4.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-17,76;CL:1000306,2.37e-09,4;CL:0002547,2.37e-09,4;CL:0000048,4.68e-09,427;CL:0000153,7.41e-09,9;CL:0000447,7.41e-09,9;CL:0000034,9.80e-09,441;CL:0000723,1.07e-08,433;CL:0000327,1.77e-08,15;CL:0000135,2.09e-08,3;CL:0000388,2.09e-08,3;CL:0000134,2.29e-08,354;CL:0002334,2.92e-08,12;CL:0002320,6.33e-08,361;CL:0000499,8.94e-08,28;CL:0002620,1.11e-07,23;CL:0000151,1.42e-07,36;CL:0002580,2.71e-07,3;CL:0000219,7.82e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.43e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.43e-07;5!DOID:450;1.43e-07;5!DOID:66;1.43e-07;5!DOID:423;1.43e-07;5!DOID:0080000;1.43e-07;5!DOID:11722;1.43e-07;5!DOID:0060084;1.54e-07;3!DOID:127;1.54e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.35e-07,5;DOID:450,1.35e-07,5;DOID:66,1.35e-07,5;DOID:423,1.35e-07,5;DOID:0080000,1.35e-07,5;DOID:11722,1.35e-07,5;DOID:0060084,1.50e-07,3;DOID:127,1.50e-07,3;DOID:2394,8.94e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.43e-08!70;UBERON:0001134!4.78e-08!61;UBERON:0002036!4.78e-08!61;UBERON:0003082!4.78e-08!61;UBERON:0002199!1.17e-07!45;UBERON:0002416!1.17e-07!45;UBERON:0000486!1.19e-07!82;UBERON:0002385!1.71e-07!63;UBERON:0001015!1.71e-07!63;UBERON:0000383!1.71e-07!63;UBERON:0000914!3.07e-07!83;UBERON:0002329!3.07e-07!83;UBERON:0003077!3.07e-07!83;UBERON:0003059!3.07e-07!83;UBERON:0007282!3.07e-07!83;UBERON:0009618!3.07e-07!83;UBERON:0007285!3.07e-07!83;UBERON:0002097!7.27e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.90e-09;4!UBERON:0000415;3.90e-09;4!UBERON:0007240;3.90e-09;4!UBERON:0005742;3.90e-09;4!UBERON:0005734;3.90e-09;4!UBERON:0004664;3.90e-09;4!UBERON:0004663;3.90e-09;4!UBERON:0004457;1.64e-08;9!UBERON:0000042;1.64e-08;9!UBERON:0007846;2.07e-08;3!UBERON:0000043;2.07e-08;3!UBERON:0007845;2.07e-08;3!UBERON:0001013;7.37e-07;14!UBERON:0002384;8.00e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.37e-09,4;UBERON:0007240,2.37e-09,4;UBERON:0005742,2.37e-09,4;UBERON:0005734,2.37e-09,4;UBERON:0004664,2.37e-09,4;UBERON:0004663,2.37e-09,4;UBERON:0007846,2.09e-08,3;UBERON:0000043,2.09e-08,3;UBERON:0007845,2.09e-08,3;UBERON:0002384,7.07e-08,371;UBERON:0001013,6.88e-07,14 | |||
|phase1_expression=1.81678379270557,1.92690471501885,0.140954404095971,3.00219895059391,1.34088328328186,5.23403114460221,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0.85870796139317,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,2.53007406669196,1.50401373190767,4.34539556882471,0,3.40644409211845,0.0945348171640679,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,4.96971951695318,1.77282716330412,2.1185468930115,5.73673241497627,1.77334191099179,1.12135520028461,0,1.2333377420858,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0.936480230490962,0,0.597794722207204,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0.340296549480063,2.33206526395521,2.34913127700424,1.48352330811693,6.60200411385685,0.412210116953756,3.60696756063881,2.04728541964749,1.35021065793013,0.68205903612839,4.03894038790583,1.01254888506529,0.969876340912871,2.13005755509969,0.302256294682921,0.67824236924195,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0.168584690078102,0,0.330881918197182,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.22001485746285,0.775630294546667,0,0,0.26593811658487,0,0,0,0,1.42977993658148,0,0,0.977208552881205,1.77695974371273,0,1.20575750823834,1.74306691720059,1.19967589418468,0,0,0,3.35474797688216,1.14861935834114,0,4.05387658669222,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.24782516918484,2.14114786556594,0.788512075169673,0.819989904948992,0,0,1.03473071292505,1.32845119707087,0,0.347534457872331,0,0,0,0,0,0,0,0,1.73675465473144,1.84154367945675,3.08726103876381,1.79394808957981,0.511707249066704,3.37793234401576,2.96836132889982,0.925258162815933,1.77561725313127,0.492762936082855,0,0.464841513839837,0,0,0,0.68888668898764,0.728364672026868,0.524497659837696,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.644521469209642,0,0,0.356128142586949,0,0,0,0,1.85938219718914,11.9628691795643,0,0.616067160352178,1.59691809095107,0.869932992075073,0,0.143124886741991,0,0,0.38126038784765,0,1.28381696410176,0,0,1.2591072030832,0.54907405947211,0.471249609382746,0,0,0,0,1.21856744815642,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0.66343897524122,0.438450885253763,1.15755106853338,0,0,0.92947049429925,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0,2.32218398827431,3.95153871551882,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,4.0435146396035,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87944129886466,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,2.57859264851974,0,0.279282401272254,0,0,0.199679000498991,0,0,0,2.16179930125442,0,0.0787831823072236,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.422401346077626,0,0,0,0,0,2.71499800876856,7.77799342081141,1.30634944043764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,1.19403842309499,2.10341978862502,4.99325275352352,0.947015026375446,1.76097531226803,0,2.51724075236616,0.756154618816195,0.310874401165561,0.147855149989634,1.91156120596443,0,0.776314784381297,0.414706207840855,6.91188457850787,1.5652351854352,2.85489457094715,1.52322084867518,0.813741466409323,1.09109195521536,0.859284456339908,0.464033759878494,3.18476710958893,0.400027764663154,1.71697852591396,1.6837474438296,0,0,0.428883182749851,0,0.680117776536817,0.694567422971502,0.244736704506468,0.895444205407437,0.308801447160972,0.438568099157414,1.23682402162117,0.578742114812744,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,1.27201740261367,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr5:121400881..121400901,- | |||
}} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121400881..121400901, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121400881..121400901, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-17 | 76 |
fibroblast of tunica adventitia of artery | 2.37e-09 | 4 |
fibroblast of the aortic adventitia | 2.37e-09 | 4 |
multi fate stem cell | 4.68e-09 | 427 |
GAG secreting cell | 7.41e-09 | 9 |
carbohydrate secreting cell | 7.41e-09 | 9 |
stem cell | 9.80e-09 | 441 |
somatic stem cell | 1.07e-08 | 433 |
extracellular matrix secreting cell | 1.77e-08 | 15 |
fibrocyte | 2.09e-08 | 3 |
tendon cell | 2.09e-08 | 3 |
mesenchymal cell | 2.29e-08 | 354 |
preadipocyte | 2.92e-08 | 12 |
connective tissue cell | 6.33e-08 | 361 |
stromal cell | 8.94e-08 | 28 |
skin fibroblast | 1.11e-07 | 23 |
secretory cell | 1.42e-07 | 36 |
preadipocyte of the breast | 2.71e-07 | 3 |
motile cell | 7.82e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.37e-09 | 4 |
tunica adventitia of artery | 2.37e-09 | 4 |
adventitia | 2.37e-09 | 4 |
tunica adventitia of blood vessel | 2.37e-09 | 4 |
aorta tunica adventitia | 2.37e-09 | 4 |
aorta wall | 2.37e-09 | 4 |
dense regular connective tissue | 2.09e-08 | 3 |
tendon | 2.09e-08 | 3 |
regular connective tissue | 2.09e-08 | 3 |
connective tissue | 7.07e-08 | 371 |
adipose tissue | 6.88e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.35e-07 | 5 |
myotonic disease | 1.35e-07 | 5 |
muscle tissue disease | 1.35e-07 | 5 |
myopathy | 1.35e-07 | 5 |
muscular disease | 1.35e-07 | 5 |
myotonic dystrophy | 1.35e-07 | 5 |
cell type benign neoplasm | 1.50e-07 | 3 |
leiomyoma | 1.50e-07 | 3 |
ovarian cancer | 8.94e-07 | 14 |