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FFCP PHASE1:Mm9::chr16:37868423..37868461,+: Difference between revisions

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{{FFCP|EntrezGene=320184|HGNC=|UniProt=Q3UGP9,Q8BTI3|association_with_transcript=-13bp_to_ENSMUST00000078717,ENSMUST00000171099_5end|description=CAGE_peak_2_at_Lrrc58_5end|id=chr16:37868423..37868461,+|ontology_enrichment_celltype=CL:0000055!1.87e-15!50;CL:0000221!3.21e-14!44;CL:0000133!3.21e-14!44;CL:0002319!7.28e-14!43;CL:0000393!3.38e-11!39;CL:0000211!3.38e-11!39;CL:0000540!1.89e-09!33;CL:0000047!1.89e-09!33;CL:0000031!1.89e-09!33;CL:0000404!1.89e-09!33;CL:0002321!5.96e-08!70;CL:0000220!5.96e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.21e-14,44;CL:0000133,3.21e-14,44;CL:0002319,7.28e-14,43;CL:0000393,3.38e-11,39;CL:0000211,3.38e-11,39;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0002321,5.96e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.19e-10!102;UBERON:0000924!4.19e-10!102;UBERON:0006601!4.19e-10!102;UBERON:0000073!1.75e-07!75;UBERON:0001016!1.75e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.39e-09,95;UBERON:0000924,3.39e-09,95;UBERON:0006601,3.39e-09,95;UBERON:0001016,1.75e-07,75|phase1_expression=10.890121603126,2.09385244583617,4.09499315450582,2.11724947914781,2.50447864973174,5.37213670118047,5.37309073369709,2.96983643915625,5.34997144176334,2.10658073689794,3.93801326918661,5.74359544766422,3.25281386869291,3.3219752919219,2.6648780945253,3.64455481301687,3.49780939064073,1.89277299214943,2.19383093769182,2.12194825899015,9.35476191661768,6.7517846816602,4.96279599363977,2.07990149631429,2.75291137280604,3.44539178469012,2.58457197695445,2.15471232685889,2.28028103347649,2.52030129759931,3.54768817048488,1.90509202037889,3.69038872550742,0,4.91047753577167,7.31432439577366,5.10423390655923,1.67412652294763,2.3440060335714,3.14114246384279,1.17646297606203,5.46436387966757,0.971020706062307,12.211991343631,12.5707394712198,11.3798986340243,27.3836970521814,23.1106665763273,17.3552084360233,21.970578595394,23.2377459898102,5.75010257459886,2.68452169692378,2.17608642603403,3.36093799142464,21.0952737549477,18.0516067161417,13.4074743992135,10.7227724255587,8.46385566835253,9.50747105259269,14.9091594110418,15.1180115338894,10.3488467487361,6.92206453796882,10.6572017241915,16.4780060785123,16.9056054341484,22.8117147078651,16.8757422914613,22.9254207873006,15.1395021734016,17.4486147351775,13.229006315215,15.7186572469908,11.9498442259303,15.4162233399144,12.7687338085188,14.4390141260869,10.8146755938759,9.60620257825301,10.939180781692,12.0048689570594,9.56696437053856,17.8773949898868,17.6777151284201,16.9422300150933,15.8439528951505,19.6888102666279,19.1951762671235,13.3337664802772,9.46466264679525,14.2793980078628,4.85732872474035,8.4470934268197,7.16843019355737,5.47733238513832,13.9752864514007,14.5480162577607,12.3668851078619,14.084341977668,16.6824420638613,2.54805239706646,28.4426681261332,5.84525810730278,6.33399663687746,5.05524445014783,8.67797485864856,2.84831672011889,11.2816025689267,10.7560902595004,8.52503339273995,9.22461989024234,14.3186508524991,13.9930561491489,20.6093209780668,20.0227923864843,13.8815382643115,4.42305275974937,11.1619126463712,10.1587098491781,6.30337829075789,9.31958806090611,11.7112318804619,7.95897485891129,3.57639877292028,9.22576458695586,4.79922184794726,8.51370521389534,7.78911324905078,7.32000964509802,10.178002521142,6.95297280769106,8.95004100656157,8.72709787150152,7.78758062725237,14.0538322113436,9.45492976636707,9.09801930361229,13.0473950649614,7.80722657776222,9.65588838620586,11.884100567153,11.3028613376786,13.1990808353576,9.60852902136373,11.2442069471675,6.46758426847539,14.4430555265004,14.1829560125864,15.1317966780996,12.0557652835166,10.8438427197983,12.1888258282758,11.9353639116607,14.927570011387,2.80885274925294,6.17634977075316,6.53576048609863,9.73491130916859,8.67746421930056,9.54328925743379,7.33908680314152,9.44468312387538,8.79322543458056,8.8362899005155,11.267482858784,12.9609530027558,11.8483091937706,12.9692296622485,14.6734545277999,9.5029991826466,11.1970558798436,7.38135303182045,12.1968170167194,18.3170210035126,0.991256348951394,4.23120906661671,10.024547775156,9.98617688999886,11.8558064416326,11.0925938542838,10.4517680607089,9.51128130562796,13.2868137232463,8.23494773620054,10.5560787696113,10.544693018181,9.35827618171777,10.7858329038507,7.13255564586491,6.17337947088538,12.3284135619503,13.1385789501188,14.6520056375005,10.997171703647,10.6673867942194,15.9909669349926,17.1371015606737,11.9564219863478,10.8329122210549,9.13139013021324,8.30067355844017,5.6727335943472,6.6830058338489,2.9232074610031,5.27436315610108,5.30589751455317,4.83789118384698,4.31544206176216,6.16113861745134,5.76578967694971,7.18841032636773,4.83783231969054,8.7370548472077,7.57736633841335,7.17589654087649,7.71909634181387,9.42241269849684,11.9379589415405,12.548303186036,10.6939404038369,9.15291968325158,10.3853879613926,13.0924002487308,16.5863600679129,12.2955412402829,12.6234873099802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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320184
|HGNC=
|TSSclassifier=NA
|UniProt=Q3UGP9,Q8BTI3
|association_with_transcript=-13bp_to_ENSMUST00000078717,ENSMUST00000171099_5end
|cluster_id=chr16:37868423..37868461,+
|description=CAGE_peak_2_at_Lrrc58_5end
|id=chr16:37868423..37868461,+
|ontology_enrichment_celltype=CL:0000055!1.87e-15!50;CL:0000221!3.21e-14!44;CL:0000133!3.21e-14!44;CL:0002319!7.28e-14!43;CL:0000393!3.38e-11!39;CL:0000211!3.38e-11!39;CL:0000540!1.89e-09!33;CL:0000047!1.89e-09!33;CL:0000031!1.89e-09!33;CL:0000404!1.89e-09!33;CL:0002321!5.96e-08!70;CL:0000220!5.96e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,3.21e-14,44;CL:0000133,3.21e-14,44;CL:0002319,7.28e-14,43;CL:0000393,3.38e-11,39;CL:0000211,3.38e-11,39;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0002321,5.96e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.19e-10!102;UBERON:0000924!4.19e-10!102;UBERON:0006601!4.19e-10!102;UBERON:0000073!1.75e-07!75;UBERON:0001016!1.75e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.39e-09,95;UBERON:0000924,3.39e-09,95;UBERON:0006601,3.39e-09,95;UBERON:0001016,1.75e-07,75
|phase1_expression=10.890121603126,2.09385244583617,4.09499315450582,2.11724947914781,2.50447864973174,5.37213670118047,5.37309073369709,2.96983643915625,5.34997144176334,2.10658073689794,3.93801326918661,5.74359544766422,3.25281386869291,3.3219752919219,2.6648780945253,3.64455481301687,3.49780939064073,1.89277299214943,2.19383093769182,2.12194825899015,9.35476191661768,6.7517846816602,4.96279599363977,2.07990149631429,2.75291137280604,3.44539178469012,2.58457197695445,2.15471232685889,2.28028103347649,2.52030129759931,3.54768817048488,1.90509202037889,3.69038872550742,0,4.91047753577167,7.31432439577366,5.10423390655923,1.67412652294763,2.3440060335714,3.14114246384279,1.17646297606203,5.46436387966757,0.971020706062307,12.211991343631,12.5707394712198,11.3798986340243,27.3836970521814,23.1106665763273,17.3552084360233,21.970578595394,23.2377459898102,5.75010257459886,2.68452169692378,2.17608642603403,3.36093799142464,21.0952737549477,18.0516067161417,13.4074743992135,10.7227724255587,8.46385566835253,9.50747105259269,14.9091594110418,15.1180115338894,10.3488467487361,6.92206453796882,10.6572017241915,16.4780060785123,16.9056054341484,22.8117147078651,16.8757422914613,22.9254207873006,15.1395021734016,17.4486147351775,13.229006315215,15.7186572469908,11.9498442259303,15.4162233399144,12.7687338085188,14.4390141260869,10.8146755938759,9.60620257825301,10.939180781692,12.0048689570594,9.56696437053856,17.8773949898868,17.6777151284201,16.9422300150933,15.8439528951505,19.6888102666279,19.1951762671235,13.3337664802772,9.46466264679525,14.2793980078628,4.85732872474035,8.4470934268197,7.16843019355737,5.47733238513832,13.9752864514007,14.5480162577607,12.3668851078619,14.084341977668,16.6824420638613,2.54805239706646,28.4426681261332,5.84525810730278,6.33399663687746,5.05524445014783,8.67797485864856,2.84831672011889,11.2816025689267,10.7560902595004,8.52503339273995,9.22461989024234,14.3186508524991,13.9930561491489,20.6093209780668,20.0227923864843,13.8815382643115,4.42305275974937,11.1619126463712,10.1587098491781,6.30337829075789,9.31958806090611,11.7112318804619,7.95897485891129,3.57639877292028,9.22576458695586,4.79922184794726,8.51370521389534,7.78911324905078,7.32000964509802,10.178002521142,6.95297280769106,8.95004100656157,8.72709787150152,7.78758062725237,14.0538322113436,9.45492976636707,9.09801930361229,13.0473950649614,7.80722657776222,9.65588838620586,11.884100567153,11.3028613376786,13.1990808353576,9.60852902136373,11.2442069471675,6.46758426847539,14.4430555265004,14.1829560125864,15.1317966780996,12.0557652835166,10.8438427197983,12.1888258282758,11.9353639116607,14.927570011387,2.80885274925294,6.17634977075316,6.53576048609863,9.73491130916859,8.67746421930056,9.54328925743379,7.33908680314152,9.44468312387538,8.79322543458056,8.8362899005155,11.267482858784,12.9609530027558,11.8483091937706,12.9692296622485,14.6734545277999,9.5029991826466,11.1970558798436,7.38135303182045,12.1968170167194,18.3170210035126,0.991256348951394,4.23120906661671,10.024547775156,9.98617688999886,11.8558064416326,11.0925938542838,10.4517680607089,9.51128130562796,13.2868137232463,8.23494773620054,10.5560787696113,10.544693018181,9.35827618171777,10.7858329038507,7.13255564586491,6.17337947088538,12.3284135619503,13.1385789501188,14.6520056375005,10.997171703647,10.6673867942194,15.9909669349926,17.1371015606737,11.9564219863478,10.8329122210549,9.13139013021324,8.30067355844017,5.6727335943472,6.6830058338489,2.9232074610031,5.27436315610108,5.30589751455317,4.83789118384698,4.31544206176216,6.16113861745134,5.76578967694971,7.18841032636773,4.83783231969054,8.7370548472077,7.57736633841335,7.17589654087649,7.71909634181387,9.42241269849684,11.9379589415405,12.548303186036,10.6939404038369,9.15291968325158,10.3853879613926,13.0924002487308,16.5863600679129,12.2955412402829,12.6234873099802,17.2211150150086,10.3233888270915,10.5337838938196,12.5844680965915,1.50791283939272,3.26343410291226,9.34352118736169,12.417153583713,7.86697890940181,8.67366480782304,12.4590558486273,11.3611917241968,13.2513452154828,13.2749173060857,12.2791336707695,17.4447222505363,18.4922899488387,21.2307398091624,17.4068601720205,12.2747460322751,15.0209355619679,8.35435422696698,12.3487874131194,15.8478387263857,17.4289046508326,12.7026994688852,10.619611067197,7.04063844849446,9.06970670894253,4.71512699389745,8.26845300066164,15.9866276930842,11.3708448994017,14.5413491791002,13.9033977570041,9.16506598013866,12.6502330289999,13.4076206222643,8.85142974959849,9.00305470156551,6.85601024048599,10.7168517515796,12.4138163549592,14.0911365905636,18.1003922662333,6.69822888052118,11.4989136951218,12.2862601101016,6.83638033970382,15.6641940294406,13.5630118424561,17.2494965294526,13.8471919043638,14.6085400773105,9.61886760878507,10.5692422145991,4.78438466233988,9.70018279427146,6.11141940320049,3.76736914009382,4.23752105935178,4.80434163733698,5.94924504978494,9.23679585336143,8.43019840206985,0.954670618015114,13.6024477239888,13.6224042974989,11.5565714679327,9.19988502463662,6.33251434863915,10.519419018016,9.91841468704031,9.16145796944104,6.61036363788144,3.72803587852155,3.38215763210514,14.5031049662659,10.092967917883,19.0562164577167,14.9825395234168,19.9368228079118,17.9556575128004,16.4057524903377,12.8976993643624,7.73069186643219,5.76060012515731,5.37218905067903,9.32535990334755,7.18976700153791,5.84643703400078,10.5625750443814,10.7287931581883,9.01465871399766,6.94140777720513,6.96668504642219,9.37343721856498,7.76361625553672,6.43222012882366,6.25376970662141,6.31135271780472,6.57518112484113,3.55177525398503,4.84454825691169,5.87596157274275,10.0458588896739,8.07034644440082,9.34073283763052,8.57473516316263,5.517293144389,6.7770221114048,10.5874804396651,6.87474616127276,9.6237782112465,9.59115527678899,5.2877572817279,8.77529250301348,5.85417564191487,7.25027854374727,3.62432218226274,13.8037172286955,17.1580695562443,9.73181552798565,11.1829089851415,9.22297915563122,14.3397936591011,8.88986911206461,8.65347240403356,7.70206103020357,4.80124702351215,7.09742039692671,8.67681170375951,12.8288865233739,12.1647789569252,12.922980515013,14.7651044297753,12.2837385501547,12.9249177710682,7.41754621445952,13.2479028120958,7.20025430009372,12.4233064311536,10.2527561677348,9.1568242478367,11.8577819323317,8.96914843651771,9.51225458938417,9.2074399003245,11.4075455630524,7.85599180320834,12.3380418849141,10.3429706494342,9.82154503607254,10.8455788830176,12.9247429357365,11.2414760072076,9.12333272937093,11.1732948105115,13.5814715768879,9.9266138603782,10.8977882741598
|short_description=p2@Lrrc58
}}

Latest revision as of 23:41, 1 October 2015

Short description:p2@Lrrc58
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc58_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000078717, ENSMUST00000171099_5end
EntrezGene:Lrrc58
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc58

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B727.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.91
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.84
Mouse Schwann, donor1.CNhs12507.11728-123D919.69
Mouse Schwann, donor2.CNhs12573.11746-123F919.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.68
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D711.28
adrenal gland, embryo E14.CNhs11038.406-44C510.76
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F514.32
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I320.61
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H113.88
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.51
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.45
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C613.20
eyeball, neonate N01.CNhs11140.1532-43E79.61
eyeball, neonate N02.CNhs11205.1551-44G811.24
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H214.18
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A812.06
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I614.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E99.73
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E312.96
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G114.67
heart, neonate N20.CNhs11127.821-26I69.50
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G118.32
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D811.86
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F79.51
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E98.23
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F813.14
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I211.00
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G715.99
kidney, neonate N10.CNhs11206.758-6D517.14
kidney, neonate N20.CNhs11113.832-19I111.96
kidney, neonate N25.CNhs11122.1353-25F310.83
kidney, neonate N30.CNhs11203.1385-42H19.13
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B19.42
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F812.55
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A610.39
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E617.22
lung, neonate N20.CNhs11109.822-18A410.32
lung, neonate N25.CNhs11119.1359-25C710.53
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.44
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I417.43
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F614.09
pituitary gland, embryo E17.CNhs11039.1265-44F518.10
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C315.66
skin, neonate N00.CNhs11124.650-25G413.56
skin, neonate N03.CNhs11215.662-22H317.25
skin, neonate N06.CNhs11097.693-20I513.85
skin, neonate N10.CNhs11108.762-6C414.61
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.43
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D411.56
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A99.92
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I16.61
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F514.50
testis, embryo E15.CNhs11034.443-27C510.09
testis, embryo E16.CNhs11033.470-26G519.06
testis, embryo E17.CNhs11029.486-18I514.98
testis, embryo E18.CNhs11027.503-18G519.94
testis, neonate N00.CNhs11189.1300-22B717.96
testis, neonate N07.CNhs11222.726-26I416.41
testis, neonate N10.CNhs11204.763-44D912.90
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I27.19
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G410.73
thymus, neonate N02.CNhs11181.1541-43F89.01
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C46.97
thymus, neonate N07.CNhs11211.713-19D39.37
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A26.43
thymus, neonate N25.CNhs11125.1362-25G76.25
thymus, neonate N30.CNhs11132.1393-42G26.31
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I813.80
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F214.34
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F912.92
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C613.58
whole body, neonate N06.CNhs10515.692-21D19.93
whole body, neonate N10.CNhs10518.761-6B410.90





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.21e-1444
neurectodermal cell3.21e-1444
neural cell7.28e-1443
electrically responsive cell3.38e-1139
electrically active cell3.38e-1139
neuron1.89e-0933
neuronal stem cell1.89e-0933
neuroblast1.89e-0933
electrically signaling cell1.89e-0933
embryonic cell5.96e-0870

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.39e-0995
ectoderm3.39e-0995
presumptive ectoderm3.39e-0995
nervous system1.75e-0775
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