FFCP PHASE1:Hg19::chr4:82392981..82392999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24881 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N437 | |||
|association_with_transcript=44bp_to_ENST00000395570,ENST00000436139_5end | |||
|cluster_id=chr4:82392981..82392999,- | |||
|description=CAGE_peak_3_at_RASGEF1B_5end | |||
|id=chr4:82392981..82392999,- | |||
|ontology_enrichment_celltype=CL:0000738!5.33e-43!140;CL:0002031!1.41e-36!124;CL:0002087!1.40e-34!119;CL:0000037!3.38e-32!172;CL:0000566!3.38e-32!172;CL:0000557!1.26e-31!71;CL:0002057!7.24e-31!42;CL:0000766!2.91e-30!76;CL:0000988!1.67e-29!182;CL:0000839!2.52e-29!70;CL:0002009!2.36e-28!65;CL:0002032!3.42e-28!165;CL:0000837!3.42e-28!165;CL:0000860!3.87e-27!45;CL:0002194!8.68e-27!63;CL:0000576!8.68e-27!63;CL:0000040!8.68e-27!63;CL:0000559!8.68e-27!63;CL:0000763!6.28e-20!112;CL:0000049!6.28e-20!112;CL:0002393!1.51e-08!9;CL:0002397!1.51e-08!9;CL:0000542!6.98e-08!53;CL:0000051!6.98e-08!53;CL:0000838!1.12e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-32;33!CL:0002057;5.62e-32;33!CL:0000473;4.33e-30;39!CL:0000234;4.33e-30;39!CL:0000576;6.93e-26;48!CL:0000766;3.75e-22;69!CL:0002087;3.94e-14;104!CL:0000738;2.63e-11;136!CL:0000763;4.75e-09;100!CL:0002393;1.02e-08;6!CL:0002397;1.02e-08;6!CL:0000791;2.15e-07;18!CL:0000789;2.15e-07;18!CL:0002419;2.15e-07;18!CL:0000988;3.14e-07;177!CL:0000624;9.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.01e-56,136;CL:0000473,2.83e-50,48;CL:0000234,2.83e-50,48;CL:0000557,1.17e-47,67;CL:0002031,2.06e-47,120;CL:0000766,1.39e-46,72;CL:0000860,6.49e-46,42;CL:0002057,6.49e-46,42;CL:0002087,1.02e-45,115;CL:0002009,8.25e-44,61;CL:0000839,2.57e-42,66;CL:0000037,2.65e-42,168;CL:0002194,2.19e-41,59;CL:0000576,2.19e-41,59;CL:0000040,2.19e-41,59;CL:0000559,2.19e-41,59;CL:0000988,2.25e-39,177;CL:0002032,1.62e-36,161;CL:0000837,1.62e-36,161;CL:0000763,2.58e-29,108;CL:0000049,2.58e-29,108;CL:0002393,4.11e-12,9;CL:0002397,4.11e-12,9;CL:0000134,5.41e-10,354;CL:0002320,3.02e-09,361;CL:0000219,1.24e-08,386;CL:0000838,1.49e-07,52;CL:0000791,2.80e-07,18;CL:0000789,2.80e-07,18;CL:0002420,2.80e-07,18;CL:0002419,2.80e-07,18;CL:0000790,2.80e-07,18;CL:0000542,2.85e-07,53;CL:0000051,2.85e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;8.55e-33;42!CL:0000049;2.63e-08;108!CL:0000790;2.15e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.81e-30!102;UBERON:0003061!5.81e-30!102;UBERON:0002371!8.67e-27!80;UBERON:0002193!2.15e-25!112;UBERON:0001474!8.56e-24!86;UBERON:0002405!1.23e-20!115;UBERON:0004765!1.09e-17!101;UBERON:0001434!1.09e-17!101;UBERON:0007023!8.99e-15!115;UBERON:0001893!3.86e-07!34;UBERON:0002791!5.02e-07!33;UBERON:0002020!5.55e-07!34;UBERON:0003528!5.55e-07!34;UBERON:0003080!5.78e-07!42;UBERON:0005743!5.89e-07!86;UBERON:0001869!6.91e-07!32;UBERON:0001049!7.35e-07!57;UBERON:0005068!7.35e-07!57;UBERON:0006241!7.35e-07!57;UBERON:0007135!7.35e-07!57;UBERON:0001017!8.08e-07!82;UBERON:0002780!8.45e-07!41;UBERON:0001890!8.45e-07!41;UBERON:0006240!8.45e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-42,76;UBERON:0002390,5.44e-41,98;UBERON:0003061,5.44e-41,98;UBERON:0001474,1.16e-37,82;UBERON:0002405,1.12e-36,93;UBERON:0002193,7.28e-36,108;UBERON:0004765,2.64e-32,90;UBERON:0001434,5.02e-28,100;UBERON:0003081,8.16e-11,203;UBERON:0002204,9.03e-11,167;UBERON:0002384,5.57e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,69.2321127254071,62.5641918898457,119.827679446643,0,0,0.369754010166788,0.697204805222715,0.995184627411951,6.16560922603179,166.752617968095,156.02358013177,127.819402851637,1.11957737119962,2.59114932815184,0.77272670290256,6.54292074508041,12.8477820854195,8.49044214157357,31.8427780560788,48.9289786745973,51.1015511976921,39.4138577481346,40.729552338127,64.5596487595838,76.1887954427927,78.7491313972268,82.6101568225485,18.07126459609,22.3783043047434,30.1129469156413,78.3574764469511,74.1346052545776,95.2612317440571,2.96866170168044,19.3479747892983,16.1965405202424,30.4719700560013,20.9932533135722,34.2552236947566,27.1348558477283,47.9764284946585,47.1299793010103,29.0591761264017,37.5643188707316,46.8364333412509,54.292608582169,91.6324532849338,74.8481364464902,20.8931253932481,29.5848478897767,27.9662520852919,72.1082241665359,70.8143370828761,67.9510652004438,3.51992488922645,2.18455444504853,0,3.84057200309856,0.400395987036012,2.87376219977242,1.32208974556972,1.90810750907073,50.0907412816315,76.340834618222,65.7509952375394,34.3645454305467,65.5795018688397,3.423993102076,21.4413649424078,19.2575273747091,21.1769543969494,0,17.2738801315803,17.0441210064504,17.534405556712,0,2.3568472597987,1.10766947291811,1.08321545506006,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,21.5015516584988,22.4734295595359,19.8617495229456,0,12.6462762888634,9.27794102803101,6.83153168452658,0.637130828648193,0,0,4.36667845325541,1.15187950038977,1.24930726552346,0.473554504088034,2.46338399076314,21.5719215250464,19.523134292196,18.2478748892327,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0,0.527008714158756,1.57174890597255,0,0,0.97364218096405,0.348259474598534,0.664789802594326,50.5600123527325,48.6195674163109,34.5455476236495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,15.511210565933,0,0,0,0,0,1.41867352879343,0,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662648841607426,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,11.4079531339648,2.94848165003288,4.72631925345123,3.09024169590255,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,1.72351904261178,4.21207677250628,1.93220510975347,0,0,0,0.0895585227028483,0,0,1.97065295158377,0.616339038092582,68.0036218973732,27.6710310560566,68.2971564836716,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,3.64871341923571,9.04062764577828,6.32501818449095,0,0,0,0,0.205476322550383,0,0,22.0674451426158,22.8565229351088,22.5883743852357,0.508189248444927,2.60279707715243,3.09315525111078,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9475236572042,37.9656993440766,32.4451775722471,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0.512900250232778,0,0.650756789328606,4.22468147755661,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0,0,0,0,0,2.01090682660736,0,3.29503302718727,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,0,1.58625035258854,0,0,0,0.929015875628594,0.432807638929335,0.497992903438899,0.159426272728822,0,1.7235483311913,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,1.68426486367398,1.61158997199083,0,0,0,1.43246690842614,2.96964680832639,0.614321404198464,5.96488588659779,0.984685914873589,0.111308705022906,0,0,1.79323189425963,0.828851746593443,1.0077309914171,0,0,0,0,0.179021174675609,0,0.591860433821602,4.7896618469388,0,1.93866549219044,1.20598527610407,0,0.7812832832557,0.262379999988587,0.724999575434793,0,1.77977555204936,0.236387681767936,1.03423011972439,2.04123229368278,0.520874984799877,3.54296554325536,1.4471572635049,0,0.221158519862449,1.18219047581419,0.658156191461918,0,1.39423744278603,0.461701551022782,0,0,0.0897576444097721,0.325942115766024,1.91400695839152,0,2.66517388009317,0,0,0.166211681900156,0,0.392125068635479,0,0.189753732724185,0,0,0,1.13082457147153,0.432777279484182,0.995261931078505,2.12298154808014,1.83309043480088,1.77912677208373,0.494255755786011,0.522109747527277,1.01101699471016,2.40773294189637,0.937057782901357,1.82454789215666,0.586993856796269,0,0.394584402849391,3.62972148145992,0.91821828489147,8.15106877207495,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0.949661939338181,0,0.400794101257669,1.2807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| |||
|short_description=p3@RASGEF1B | |||
}} |
Latest revision as of 23:24, 18 September 2015
Short description: | p3@RASGEF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RASGEF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000395570, ENST00000436139_5end |
EntrezGene: | RASGEF1B |
HGNC: | 24881 |
UniProt: | Q8N437 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.90e-42 | 76 |
hematopoietic system | 5.44e-41 | 98 |
blood island | 5.44e-41 | 98 |
bone element | 1.16e-37 | 82 |
immune system | 1.12e-36 | 93 |
hemolymphoid system | 7.28e-36 | 108 |
skeletal element | 2.64e-32 | 90 |
skeletal system | 5.02e-28 | 100 |
lateral plate mesoderm | 8.16e-11 | 203 |
musculoskeletal system | 9.03e-11 | 167 |
connective tissue | 5.57e-09 | 371 |