FFCP PHASE1:Mm9::chr15:98784018..98784022,-: Difference between revisions
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{{FFCP|EntrezGene=22142|HGNC=|MCL_coexpression_id=22|UniProt=P68369|association_with_transcript=-36bp_to_ENSMUST00000097014,ENSMUST00000136329_5end|description=CAGE_peak_6_at_Tuba1a_5end|id=chr15:98784018..98784022,-|ontology_enrichment_celltype=CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000221!9.64e-12!44;CL:0000133!9.64e-12!44;CL:0002319!1.14e-11!43;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0000055!2.98e-10!50;CL:0000393!4.46e-09!39;CL:0000211!4.46e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-16,23;CL:0000337,2.30e-16,23;CL:0000221,8.20e-12,44;CL:0000133,8.20e-12,44;CL:0002319,1.04e-11,43;CL:0000540,6.61e-10,33;CL:0000047,6.61e-10,33;CL:0000031,6.61e-10,33;CL:0000404,6.61e-10,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.61e-23!71;UBERON:0003075!4.61e-23!71;UBERON:0007284!4.61e-23!71;UBERON:0004121!3.57e-22!102;UBERON:0000924!3.57e-22!102;UBERON:0006601!3.57e-22!102;UBERON:0001017!6.68e-22!73;UBERON:0005743!6.68e-22!73;UBERON:0000073!1.35e-21!75;UBERON:0001016!1.35e-21!75;UBERON:0001049!1.34e-20!52;UBERON:0005068!1.34e-20!52;UBERON:0006241!1.34e-20!52;UBERON:0007135!1.34e-20!52;UBERON:0000033!1.68e-20!63;UBERON:0003056!2.08e-17!49;UBERON:0000955!2.31e-17!50;UBERON:0006238!2.31e-17!50;UBERON:0002616!5.60e-17!49;UBERON:0002020!1.21e-16!34;UBERON:0003080!7.20e-14!40;UBERON:0002791!1.69e-13!29;UBERON:0003528!1.69e-13!29;UBERON:0001893!1.69e-13!29;UBERON:0002780!3.01e-13!39;UBERON:0001890!3.01e-13!39;UBERON:0006240!3.01e-13!39;UBERON:0007811!5.32e-09!86;UBERON:0000956!6.71e-09!21;UBERON:0001869!6.71e-09!21;UBERON:0000203!6.71e-09!21;UBERON:0000025!8.12e-09!114;UBERON:0000153!8.44e-09!94;UBERON:0004111!4.89e-08!122;UBERON:0003076!1.11e-07!12;UBERON:0003057!1.11e-07!12;UBERON:0002619!9.14e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.91e-27,64;UBERON:0003075,4.91e-27,64;UBERON:0007284,4.91e-27,64;UBERON:0004121,7.18e-24,95;UBERON:0000924,7.18e-24,95;UBERON:0006601,7.18e-24,95;UBERON:0010371,1.78e-23,73;UBERON:0001049,2.19e-23,52;UBERON:0005068,2.19e-23,52;UBERON:0006241,2.19e-23,52;UBERON:0007135,2.19e-23,52;UBERON:0000073,2.39e-23,54;UBERON:0001017,1.34e-22,73;UBERON:0001016,2.84e-22,75;UBERON:0010314,2.12e-21,92;UBERON:0002020,1.12e-19,34;UBERON:0003056,1.46e-19,49;UBERON:0000955,2.82e-19,47;UBERON:0006238,2.82e-19,47;UBERON:0002616,8.23e-19,46;UBERON:0003528,7.96e-16,29;UBERON:0002791,7.96e-16,29;UBERON:0001893,7.96e-16,29;UBERON:0003080,2.88e-15,40;UBERON:0002780,1.59e-14,39;UBERON:0001890,1.59e-14,39;UBERON:0006240,1.59e-14,39;UBERON:0000956,3.29e-10,21;UBERON:0001869,3.29e-10,21;UBERON:0000203,3.29e-10,21;UBERON:0003076,4.32e-09,12;UBERON:0003057,4.32e-09,12;UBERON:0000025,4.89e-09,114;UBERON:0004111,8.35e-08,122;UBERON:0002619,1.29e-07,17;UBERON:0002420,4.46e-07,8;UBERON:0007245,4.46e-07,8;UBERON:0010009,4.46e-07,8;UBERON:0010011,4.46e-07,8;UBERON:0000454,4.46e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0.422366166455,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0.523523743973798,0,2.04913645487534,0,0.629484089877886,0.811015449756117,0.550640256485045,3.12956537739216,1.96222640742402,1.75748946187577,1.36100929351998,1.53985063787899,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,9.71119012126069,13.7537654610729,12.0427966666174,1.35537812827653,1.77858959222228,0,0.988866362566974,1.4209602298922,1.79760066311043,4.61061966385865,3.52544681848824,3.10513658162888,5.25812403378455,7.14127461009509,8.61387309711293,5.26710436624302,4.98396449294829,4.5960939330501,0,3.83062014255563,4.76180253094355,9.62769900430415,9.33173964744578,10.4182674111352,2.79182999001381,2.8138130501584,2.13917546887534,3.53554302568401,4.9830088279686,3.72798891650601,0.302904773332736,1.51143120213571,0.869593466105033,0.860423876981386,0,0,0,0,0,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.593768556259299,1.04091196059682,0.304465478312141,0.691846491768175,1.20578112442098,0.940709657085638,1.13099932196708,0.494389935468748,1.01219549843938,0,1.61766849947409,0,0,1.86391761218122,2.63502717310392,2.09446706813455,0,0,1.19980546198682,0.762421362438388,5.69204429738326,4.57500602818627,7.66491547888473,3.99795936442236,3.3243009452943,2.49345653471472,2.43361894601636,0.611036183101898,0.373220911830279,0,1.89397670297827,1.43132487258974,3.44853156650209,1.98068342785884,2.41127708537144,1.49680298132921,3.20284300712124,3.09215691047105,1.81092359517311,0.862271971731369,1.70195472151037,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.28416349939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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22142 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=P68369 | |||
|association_with_transcript=-36bp_to_ENSMUST00000097014,ENSMUST00000136329_5end | |||
|cluster_id=chr15:98784018..98784022,- | |||
|description=CAGE_peak_6_at_Tuba1a_5end | |||
|id=chr15:98784018..98784022,- | |||
|ontology_enrichment_celltype=CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000221!9.64e-12!44;CL:0000133!9.64e-12!44;CL:0002319!1.14e-11!43;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0000055!2.98e-10!50;CL:0000393!4.46e-09!39;CL:0000211!4.46e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-16,23;CL:0000337,2.30e-16,23;CL:0000221,8.20e-12,44;CL:0000133,8.20e-12,44;CL:0002319,1.04e-11,43;CL:0000540,6.61e-10,33;CL:0000047,6.61e-10,33;CL:0000031,6.61e-10,33;CL:0000404,6.61e-10,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.61e-23!71;UBERON:0003075!4.61e-23!71;UBERON:0007284!4.61e-23!71;UBERON:0004121!3.57e-22!102;UBERON:0000924!3.57e-22!102;UBERON:0006601!3.57e-22!102;UBERON:0001017!6.68e-22!73;UBERON:0005743!6.68e-22!73;UBERON:0000073!1.35e-21!75;UBERON:0001016!1.35e-21!75;UBERON:0001049!1.34e-20!52;UBERON:0005068!1.34e-20!52;UBERON:0006241!1.34e-20!52;UBERON:0007135!1.34e-20!52;UBERON:0000033!1.68e-20!63;UBERON:0003056!2.08e-17!49;UBERON:0000955!2.31e-17!50;UBERON:0006238!2.31e-17!50;UBERON:0002616!5.60e-17!49;UBERON:0002020!1.21e-16!34;UBERON:0003080!7.20e-14!40;UBERON:0002791!1.69e-13!29;UBERON:0003528!1.69e-13!29;UBERON:0001893!1.69e-13!29;UBERON:0002780!3.01e-13!39;UBERON:0001890!3.01e-13!39;UBERON:0006240!3.01e-13!39;UBERON:0007811!5.32e-09!86;UBERON:0000956!6.71e-09!21;UBERON:0001869!6.71e-09!21;UBERON:0000203!6.71e-09!21;UBERON:0000025!8.12e-09!114;UBERON:0000153!8.44e-09!94;UBERON:0004111!4.89e-08!122;UBERON:0003076!1.11e-07!12;UBERON:0003057!1.11e-07!12;UBERON:0002619!9.14e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.91e-27,64;UBERON:0003075,4.91e-27,64;UBERON:0007284,4.91e-27,64;UBERON:0004121,7.18e-24,95;UBERON:0000924,7.18e-24,95;UBERON:0006601,7.18e-24,95;UBERON:0010371,1.78e-23,73;UBERON:0001049,2.19e-23,52;UBERON:0005068,2.19e-23,52;UBERON:0006241,2.19e-23,52;UBERON:0007135,2.19e-23,52;UBERON:0000073,2.39e-23,54;UBERON:0001017,1.34e-22,73;UBERON:0001016,2.84e-22,75;UBERON:0010314,2.12e-21,92;UBERON:0002020,1.12e-19,34;UBERON:0003056,1.46e-19,49;UBERON:0000955,2.82e-19,47;UBERON:0006238,2.82e-19,47;UBERON:0002616,8.23e-19,46;UBERON:0003528,7.96e-16,29;UBERON:0002791,7.96e-16,29;UBERON:0001893,7.96e-16,29;UBERON:0003080,2.88e-15,40;UBERON:0002780,1.59e-14,39;UBERON:0001890,1.59e-14,39;UBERON:0006240,1.59e-14,39;UBERON:0000956,3.29e-10,21;UBERON:0001869,3.29e-10,21;UBERON:0000203,3.29e-10,21;UBERON:0003076,4.32e-09,12;UBERON:0003057,4.32e-09,12;UBERON:0000025,4.89e-09,114;UBERON:0004111,8.35e-08,122;UBERON:0002619,1.29e-07,17;UBERON:0002420,4.46e-07,8;UBERON:0007245,4.46e-07,8;UBERON:0010009,4.46e-07,8;UBERON:0010011,4.46e-07,8;UBERON:0000454,4.46e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0.422366166455,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0.523523743973798,0,2.04913645487534,0,0.629484089877886,0.811015449756117,0.550640256485045,3.12956537739216,1.96222640742402,1.75748946187577,1.36100929351998,1.53985063787899,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,9.71119012126069,13.7537654610729,12.0427966666174,1.35537812827653,1.77858959222228,0,0.988866362566974,1.4209602298922,1.79760066311043,4.61061966385865,3.52544681848824,3.10513658162888,5.25812403378455,7.14127461009509,8.61387309711293,5.26710436624302,4.98396449294829,4.5960939330501,0,3.83062014255563,4.76180253094355,9.62769900430415,9.33173964744578,10.4182674111352,2.79182999001381,2.8138130501584,2.13917546887534,3.53554302568401,4.9830088279686,3.72798891650601,0.302904773332736,1.51143120213571,0.869593466105033,0.860423876981386,0,0,0,0,0,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.593768556259299,1.04091196059682,0.304465478312141,0.691846491768175,1.20578112442098,0.940709657085638,1.13099932196708,0.494389935468748,1.01219549843938,0,1.61766849947409,0,0,1.86391761218122,2.63502717310392,2.09446706813455,0,0,1.19980546198682,0.762421362438388,5.69204429738326,4.57500602818627,7.66491547888473,3.99795936442236,3.3243009452943,2.49345653471472,2.43361894601636,0.611036183101898,0.373220911830279,0,1.89397670297827,1.43132487258974,3.44853156650209,1.98068342785884,2.41127708537144,1.49680298132921,3.20284300712124,3.09215691047105,1.81092359517311,0.862271971731369,1.70195472151037,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0.284163499395593,1.44988040774851,0.938104239924385,1.80062061461015,1.18372367792605,1.96764231747404,1.54267112887378,0.930135779001631,2.41446061259657,0.817357396570186,1.97471819896177,1.64167464079095,0.486412857275134,0.584799949701329,1.09775057645525,0.134206418760372,2.10289948564127,5.76265829323993,0,0.264450566663544,1.06644125267617,0.696710015581316,0.77320476793256,0.403367049246685,0.444756087689741,0.570676878337677,0,0,0,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0.758671603812327,0.685491075658373,0,0.814605311381257,0.581857461502877,0.911765658574141,0.505892296994058,0.442830443938806,0.627994911365499,0.863780147452604,0,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,1.47802552133284,1.32643988239339,0.977789858652155,2.03694102930226,1.17345124144251,1.00503754465089,1.19021820443007,0.195133647857799,1.26108115284953,2.21464689648775,1.43509291791738,0.983179888294428,0.690739927463582,0.144649058581512,0,0,0,0,4.65596710964597,3.04750385139728,0.163934945376675,0,0.94652465824877,2.73307121007647,0.861693590931196,0.716906393857656,1.11399337041197,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,1.92792789853084,1.13552068166615,1.42452482933804,0.488660878060728,1.15479086080775,0,0.728341908464944,0.604647113929502,0.565815239267694,1.18120757152309,0.307435147943927,0.775284879504663,1.45413491791002,1.42598951353889,0.316036757935816,0,0,1.36175842301515,1.44048875225048,0.776152102696527,0.857348140126369,0.354680467284547,1.07021290561242,1.15184314421485,1.2178597964584,0.469343416127421,0.847328283455281,0.661585194164886,0.98931751764888,0.161464426695906,1.08563264870681,1.19372344003136,1.14898629821543,0,3.33765543618917,0.170870880797853,1.44470807574256,0.740778109478847,0,0.410082683163076,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0,1.26534397432454,1.42323626988794,0.86404272657441,1.04544148007234,0.87345025498471,0.809186078308924,0.495920734352016,0,0.129614973291793,1.24267862617385,0,0.747582730219894,1.48912641411388,0.777804753376191,1.03327858782185,1.01373675294467,1.05621514781179,1.43224823328345,0.943734099831398,0.241584120826006,0,0.316011120628178,0.810900861160657,0.410843828659309,0,0.179026695667481,0.39736270956253,0,0.295379054349154,0.100966449948148,0.304827226619999,0.403304740547362,0.0974578807397524,0.288635524920988,0,0.680191150845634,0.221985953374065,0,0.503653849092235,0.965947970160952,0.563047426353546,0.549454872801795,0,0,2.82375921308533,5.52390283808612,5.72895513439397,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,1.81256963593682,1.55328093525546,2.59468368960442,3.19219898720825,2.21953687480374,0.972426868273176,1.04806581313991,0.183843508450014,1.77797382241292,2.06035057238894,1.60459604795908,1.26348605881899,1.52087579934144,1.32038438970253,0.842773567228942,1.472578505311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| |||
|short_description=p6@Tuba1a | |||
}} |
Latest revision as of 13:31, 1 October 2015
Short description: | p6@Tuba1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tuba1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -36bp_to_ENSMUST00000097014, ENSMUST00000136329_5end |
EntrezGene: | Tuba1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.30e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-16 | 23 |
ectodermal cell | 8.20e-12 | 44 |
neurectodermal cell | 8.20e-12 | 44 |
neural cell | 1.04e-11 | 43 |
neuron | 6.61e-10 | 33 |
neuronal stem cell | 6.61e-10 | 33 |
neuroblast | 6.61e-10 | 33 |
electrically signaling cell | 6.61e-10 | 33 |
electrically responsive cell | 2.10e-07 | 39 |
electrically active cell | 2.10e-07 | 39 |