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FFCP PHASE1:Mm9::chr15:98462824..98462842,+: Difference between revisions

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{{FFCP|EntrezGene=12297|HGNC=|UniProt=D3Z3Z3|association_with_transcript=173bp_to_ENSMUST00000109150,NM_001044741,uc007xnb.1_5end|description=CAGE_peak_4_at_Cacnb3_5end|id=chr15:98462824..98462842,+|ontology_enrichment_celltype=CL:0000393!1.02e-09!39;CL:0000211!1.02e-09!39;CL:0000117!2.63e-08!23;CL:0000337!2.63e-08!23;CL:0000540!8.20e-08!33;CL:0000047!8.20e-08!33;CL:0000031!8.20e-08!33;CL:0000404!8.20e-08!33;CL:0000055!4.11e-07!50|ontology_enrichment_celltype_v019_2=CL:0000393,4.04e-10,39;CL:0000211,4.04e-10,39;CL:0000117,1.22e-08,23;CL:0000337,1.22e-08,23;CL:0000540,4.03e-08,33;CL:0000047,4.03e-08,33;CL:0000031,4.03e-08,33;CL:0000404,4.03e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.58e-14!73;UBERON:0005743!1.58e-14!73;UBERON:0002780!9.97e-14!39;UBERON:0001890!9.97e-14!39;UBERON:0006240!9.97e-14!39;UBERON:0000073!1.76e-13!75;UBERON:0001016!1.76e-13!75;UBERON:0003056!1.81e-13!49;UBERON:0003080!2.53e-13!40;UBERON:0001049!1.05e-12!52;UBERON:0005068!1.05e-12!52;UBERON:0006241!1.05e-12!52;UBERON:0007135!1.05e-12!52;UBERON:0004121!3.19e-12!102;UBERON:0000924!3.19e-12!102;UBERON:0006601!3.19e-12!102;UBERON:0002346!7.66e-12!71;UBERON:0003075!7.66e-12!71;UBERON:0007284!7.66e-12!71;UBERON:0000033!1.59e-11!63;UBERON:0002020!3.97e-11!34;UBERON:0000955!5.72e-11!50;UBERON:0006238!5.72e-11!50;UBERON:0002616!1.83e-10!49;UBERON:0002791!4.40e-09!29;UBERON:0003528!4.40e-09!29;UBERON:0001893!4.40e-09!29;UBERON:0000153!1.38e-07!94;UBERON:0000468!2.37e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.38e-15,73;UBERON:0002780,3.71e-14,39;UBERON:0001890,3.71e-14,39;UBERON:0006240,3.71e-14,39;UBERON:0001016,8.92e-14,75;UBERON:0003080,9.73e-14,40;UBERON:0003056,1.18e-13,49;UBERON:0001049,6.75e-13,52;UBERON:0005068,6.75e-13,52;UBERON:0006241,6.75e-13,52;UBERON:0007135,6.75e-13,52;UBERON:0010371,7.14e-13,73;UBERON:0002346,7.88e-13,64;UBERON:0003075,7.88e-13,64;UBERON:0007284,7.88e-13,64;UBERON:0000073,1.13e-12,54;UBERON:0004121,1.39e-12,95;UBERON:0000924,1.39e-12,95;UBERON:0006601,1.39e-12,95;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0002020,1.94e-11,34;UBERON:0002616,5.76e-11,46;UBERON:0003528,2.67e-09,29;UBERON:0002791,2.67e-09,29;UBERON:0001893,2.67e-09,29;UBERON:0010314,5.20e-08,92|phase1_expression=5.92550734287738,0.348975407639361,0.454999239389536,0,0,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.198581902401771,0.261199789138935,0.639969691173627,0.91763712426868,0,0.86152399231815,0.861884930743556,1.52018735565099,2.26827116783938,2.66076612786366,0,0,0,0.866554859253824,0.997407872150954,0,0,0,0,0,0,0,4.15459499319405,4.66333883609767,11.5634453861859,2.34717403304412,1.30815093828268,2.41654801007919,0.58328969722285,1.53985063787899,0,0,0,0,5.40244815675489,2.86533439938757,3.09403255366465,9.1042407386819,8.46385566835253,11.4089652631112,3.04960078862219,0,0,0.988866362566974,0,3.89480143673926,8.06858441175265,3.00699875694585,4.72520784160917,4.83747411108179,5.14171771926846,5.30084498283872,4.5321595709533,4.02550978276593,10.1114066527102,1.10115880999389,3.31987079021488,1.53606533256243,11.4741070325269,10.9785172322892,7.29278718779464,2.23346399201105,2.8138130501584,3.36156145108982,3.83017161115768,4.41352210477219,6.15118171223492,0.227178579999552,0.604572480854284,1.73918693221007,0,0,0,0,0,0.983110940922263,8.69194645148094,4.93593408745451,7.42013106471715,6.76048414928066,2.56652954828636,5.09610479413291,7.11066703153331,2.16491041011214,1.52015919285059,1.51657333504435,0.34255163915718,4.40194402200192,1.33597925158342,3.46970653532272,2.13125834818499,1.84492397804847,1.80867168663147,1.99900802130698,0.502666365318702,0.494389935468748,0.86759614151947,0,2.26473589926373,0.883366073841574,0.969750506270444,3.72783522436244,0.292780797011547,0.628340120440365,1.53274233125155,0,0,0,1.49790639404823,7.32000964509802,15.4554853098823,4.34560800480691,6.39288643325826,4.98691306942944,4.54275536589721,4.07357455401265,0.995255764880744,0.252722758433675,0.841767423545896,3.3831315170303,3.90833577536904,4.68161537493908,3.16480117455002,2.99360596265843,2.0498195245576,2.62364828767241,1.81092359517311,2.58681591519411,5.29497024469894,6.33424046990216,4.60311038097907,3.61461423993277,2.43776516565517,3.49829631893504,2.7864797354589,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,0.946978942340841,1.18058539048442,0.308534225774757,0.697601834251224,0.804820204198858,1.5179494507732,2.30383789878873,1.64167464079095,1.54030738137126,0.584799949701329,0.219550115291051,0.402619256281115,2.94405927989778,9.05560588937703,0.330418782983798,0.264450566663544,7.46508876873319,7.89604684325491,4.25262622362908,2.21851877085677,0.667134131534611,2.28270751335071,2.37264530772256,0.988193728344065,2.5133520880027,2.58643413653496,3.31438948102504,2.69645822596266,1.72910439899755,2.78797782556114,3.03468641524931,2.85621281524322,5.63538678365402,2.44381593414377,1.7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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12297
|HGNC=
|TSSclassifier=NA
|UniProt=D3Z3Z3
|association_with_transcript=173bp_to_ENSMUST00000109150,NM_001044741,uc007xnb.1_5end
|cluster_id=chr15:98462824..98462842,+
|description=CAGE_peak_4_at_Cacnb3_5end
|id=chr15:98462824..98462842,+
|ontology_enrichment_celltype=CL:0000393!1.02e-09!39;CL:0000211!1.02e-09!39;CL:0000117!2.63e-08!23;CL:0000337!2.63e-08!23;CL:0000540!8.20e-08!33;CL:0000047!8.20e-08!33;CL:0000031!8.20e-08!33;CL:0000404!8.20e-08!33;CL:0000055!4.11e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000393,4.04e-10,39;CL:0000211,4.04e-10,39;CL:0000117,1.22e-08,23;CL:0000337,1.22e-08,23;CL:0000540,4.03e-08,33;CL:0000047,4.03e-08,33;CL:0000031,4.03e-08,33;CL:0000404,4.03e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.58e-14!73;UBERON:0005743!1.58e-14!73;UBERON:0002780!9.97e-14!39;UBERON:0001890!9.97e-14!39;UBERON:0006240!9.97e-14!39;UBERON:0000073!1.76e-13!75;UBERON:0001016!1.76e-13!75;UBERON:0003056!1.81e-13!49;UBERON:0003080!2.53e-13!40;UBERON:0001049!1.05e-12!52;UBERON:0005068!1.05e-12!52;UBERON:0006241!1.05e-12!52;UBERON:0007135!1.05e-12!52;UBERON:0004121!3.19e-12!102;UBERON:0000924!3.19e-12!102;UBERON:0006601!3.19e-12!102;UBERON:0002346!7.66e-12!71;UBERON:0003075!7.66e-12!71;UBERON:0007284!7.66e-12!71;UBERON:0000033!1.59e-11!63;UBERON:0002020!3.97e-11!34;UBERON:0000955!5.72e-11!50;UBERON:0006238!5.72e-11!50;UBERON:0002616!1.83e-10!49;UBERON:0002791!4.40e-09!29;UBERON:0003528!4.40e-09!29;UBERON:0001893!4.40e-09!29;UBERON:0000153!1.38e-07!94;UBERON:0000468!2.37e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.38e-15,73;UBERON:0002780,3.71e-14,39;UBERON:0001890,3.71e-14,39;UBERON:0006240,3.71e-14,39;UBERON:0001016,8.92e-14,75;UBERON:0003080,9.73e-14,40;UBERON:0003056,1.18e-13,49;UBERON:0001049,6.75e-13,52;UBERON:0005068,6.75e-13,52;UBERON:0006241,6.75e-13,52;UBERON:0007135,6.75e-13,52;UBERON:0010371,7.14e-13,73;UBERON:0002346,7.88e-13,64;UBERON:0003075,7.88e-13,64;UBERON:0007284,7.88e-13,64;UBERON:0000073,1.13e-12,54;UBERON:0004121,1.39e-12,95;UBERON:0000924,1.39e-12,95;UBERON:0006601,1.39e-12,95;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0002020,1.94e-11,34;UBERON:0002616,5.76e-11,46;UBERON:0003528,2.67e-09,29;UBERON:0002791,2.67e-09,29;UBERON:0001893,2.67e-09,29;UBERON:0010314,5.20e-08,92
|phase1_expression=5.92550734287738,0.348975407639361,0.454999239389536,0,0,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.198581902401771,0.261199789138935,0.639969691173627,0.91763712426868,0,0.86152399231815,0.861884930743556,1.52018735565099,2.26827116783938,2.66076612786366,0,0,0,0.866554859253824,0.997407872150954,0,0,0,0,0,0,0,4.15459499319405,4.66333883609767,11.5634453861859,2.34717403304412,1.30815093828268,2.41654801007919,0.58328969722285,1.53985063787899,0,0,0,0,5.40244815675489,2.86533439938757,3.09403255366465,9.1042407386819,8.46385566835253,11.4089652631112,3.04960078862219,0,0,0.988866362566974,0,3.89480143673926,8.06858441175265,3.00699875694585,4.72520784160917,4.83747411108179,5.14171771926846,5.30084498283872,4.5321595709533,4.02550978276593,10.1114066527102,1.10115880999389,3.31987079021488,1.53606533256243,11.4741070325269,10.9785172322892,7.29278718779464,2.23346399201105,2.8138130501584,3.36156145108982,3.83017161115768,4.41352210477219,6.15118171223492,0.227178579999552,0.604572480854284,1.73918693221007,0,0,0,0,0,0.983110940922263,8.69194645148094,4.93593408745451,7.42013106471715,6.76048414928066,2.56652954828636,5.09610479413291,7.11066703153331,2.16491041011214,1.52015919285059,1.51657333504435,0.34255163915718,4.40194402200192,1.33597925158342,3.46970653532272,2.13125834818499,1.84492397804847,1.80867168663147,1.99900802130698,0.502666365318702,0.494389935468748,0.86759614151947,0,2.26473589926373,0.883366073841574,0.969750506270444,3.72783522436244,0.292780797011547,0.628340120440365,1.53274233125155,0,0,0,1.49790639404823,7.32000964509802,15.4554853098823,4.34560800480691,6.39288643325826,4.98691306942944,4.54275536589721,4.07357455401265,0.995255764880744,0.252722758433675,0.841767423545896,3.3831315170303,3.90833577536904,4.68161537493908,3.16480117455002,2.99360596265843,2.0498195245576,2.62364828767241,1.81092359517311,2.58681591519411,5.29497024469894,6.33424046990216,4.60311038097907,3.61461423993277,2.43776516565517,3.49829631893504,2.7864797354589,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,0.946978942340841,1.18058539048442,0.308534225774757,0.697601834251224,0.804820204198858,1.5179494507732,2.30383789878873,1.64167464079095,1.54030738137126,0.584799949701329,0.219550115291051,0.402619256281115,2.94405927989778,9.05560588937703,0.330418782983798,0.264450566663544,7.46508876873319,7.89604684325491,4.25262622362908,2.21851877085677,0.667134131534611,2.28270751335071,2.37264530772256,0.988193728344065,2.5133520880027,2.58643413653496,3.31438948102504,2.69645822596266,1.72910439899755,2.78797782556114,3.03468641524931,2.85621281524322,5.63538678365402,2.44381593414377,1.74557238450863,2.24434623649019,1.58091342810643,1.32849133181642,0.627994911365499,0.616985819609003,0,0.667380422864376,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0,1.37280706594041,0,1.86070473834252,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,0.184753190166605,4.54779388249163,3.25929952884052,2.71592137240301,0.234690248288502,1.17254380209271,0.476087281772027,0.195133647857799,3.62560831444239,6.2010113101657,4.62418829106713,0.983179888294428,0.172684981865896,0.289298117163023,0,0,0,0.827810238914197,1.44495530989013,1.28932855251423,3.77050374366353,0.757412781613119,2.83957397474631,1.17131623288992,2.15423397732799,1.43381278771531,2.00518806674155,1.98153571552183,2.02405350837447,3.21481443702443,4.74345333535828,6.74774764485795,3.12268187458191,6.23229612835393,6.8412522928502,6.43383479592888,1.32745138339963,1.94224508923985,2.72091201268276,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,2.54473610634254,1.78248689192361,1.26414703174326,1.05418608574999,0,6.80879211507576,4.86164953884538,4.52755393239641,5.5727629108214,7.27094957933322,7.84822797449111,5.59466670047211,3.95804433848979,0,1.90648863777438,5.07215315526412,2.80306630000516,3.87514624070173,3.43783672090488,1.67121281604391,1.31312719796049,2.62332752966866,1.8542530201051,0.341741761595705,2.27025554759545,0,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,6.68269432610579,6.64305586520384,5.89626454667861,2.59212817972323,2.92723614420256,2.62035076495413,3.64133735239016,3.14083131756277,2.87931536182433,3.24037433229482,0.621339313086926,0,3.13984746692355,2.81279433777066,3.11121901350476,2.58319646955462,1.520605129417,1.64300134104056,2.21347454234715,1.04859344425711,0.241584120826006,0,0.316011120628178,4.25722952109345,2.77319584345034,1.29920822977795,0.716106782669926,1.19208812868759,0.961563596159751,0.443068581523732,0.605798699688886,0.457240839929999,0.302478555410522,0.682205165178267,0.288635524920988,0.818138315270983,0.453460767230423,0,0.269141569828427,0.503653849092235,2.89784391048286,0.93841237725591,3.47988086107804,1.71494703263253,2.00628841614145,3.3885110557024,3.68260189205742,5.15605962095457,3.95262319390481,4.7955776383945,4.5323633843382,2.02506750069542,5.40385443869065,3.17199686288943,3.62432218226274,3.63255716544618,3.59122386060928,5.29274177837816,2.67417388775123,2.93458427679175,4.04455718590031,2.66696073361938,3.29656091582231,3.20919209591815,4.04315538822076,2.5347929989024,3.01802146217722,2.43467919421694,2.75308155340938,2.12511235135769,2.38146845641537,4.51948871184936,2.12200142510076,3.70877310722976,2.94397840268795,3.08582327146874,2.8396128985494,2.38436189947321,2.76158191601424,3.19971893412124,3.46919892355874,3.10977553883713,3.94604567156764,3.53090695999241,3.36685362994643,3.79632057997357,3.15214343601803,2.86461730218783,2.63392630016142,2.3148793317737,3.2475375131933,2.57324769289949,3.22306581072447,1.72159498861959,2.64709702943419,1.62307484934295
|short_description=p4@Cacnb3
}}

Latest revision as of 13:09, 1 October 2015

Short description:p4@Cacnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cacnb3_5end
Coexpression cluster:NA
Association with transcript: 173bp_to_ENSMUST00000109150, NM_001044741, uc007xnb.1_5end
EntrezGene:Cacnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Cacnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H33.44
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell4.04e-1039
electrically active cell4.04e-1039
CNS neuron (sensu Vertebrata)1.22e-0823
neuroblast (sensu Vertebrata)1.22e-0823
neuron4.03e-0833
neuronal stem cell4.03e-0833
neuroblast4.03e-0833
electrically signaling cell4.03e-0833

Uber anatomy
Ontology termp-valuen
central nervous system5.38e-1573
regional part of forebrain3.71e-1439
forebrain3.71e-1439
future forebrain3.71e-1439
nervous system8.92e-1475
anterior neural tube9.73e-1440
pre-chordal neural plate1.18e-1349
neural tube6.75e-1352
neural rod6.75e-1352
future spinal cord6.75e-1352
neural keel6.75e-1352
ecto-epithelium7.14e-1373
neurectoderm7.88e-1364
neural plate7.88e-1364
presumptive neural plate7.88e-1364
regional part of nervous system1.13e-1254
ectoderm-derived structure1.39e-1295
ectoderm1.39e-1295
presumptive ectoderm1.39e-1295
brain1.67e-1147
future brain1.67e-1147
gray matter1.94e-1134
regional part of brain5.76e-1146
brain grey matter2.67e-0929
regional part of telencephalon2.67e-0929
telencephalon2.67e-0929
structure with developmental contribution from neural crest5.20e-0892
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