FFCP PHASE1:Mm9::chr15:97938896..97938912,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18642|HGNC=|UniProt=P47857|association_with_transcript=0bp_to_ENSMUST00000051226,NM_001163487,uc007xlv.2_5end|description=CAGE_peak_5_at_Pfkm_5end|id=chr15:97938896..97938912,+|ontology_enrichment_celltype=CL:0000221!7.72e-11!44;CL:0000133!7.72e-11!44;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0002319!1.52e-10!43;CL:0000540!1.17e-09!33;CL:0000047!1.17e-09!33;CL:0000031!1.17e-09!33;CL:0000404!1.17e-09!33;CL:0000055!8.03e-09!50;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.84e-12,23;CL:0000337,3.84e-12,23;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44;CL:0002319,2.11e-10,43;CL:0000540,2.99e-09,33;CL:0000047,2.99e-09,33;CL:0000031,2.99e-09,33;CL:0000404,2.99e-09,33;CL:0000393,9.33e-08,39;CL:0000211,9.33e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.99e-24!73;UBERON:0005743!4.99e-24!73;UBERON:0000073!5.32e-23!75;UBERON:0001016!5.32e-23!75;UBERON:0004121!4.71e-22!102;UBERON:0000924!4.71e-22!102;UBERON:0006601!4.71e-22!102;UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!1.68e-20!63;UBERON:0001049!2.71e-19!52;UBERON:0005068!2.71e-19!52;UBERON:0006241!2.71e-19!52;UBERON:0007135!2.71e-19!52;UBERON:0000955!1.54e-18!50;UBERON:0006238!1.54e-18!50;UBERON:0002616!6.94e-18!49;UBERON:0003056!1.62e-15!49;UBERON:0002020!3.44e-15!34;UBERON:0003080!7.56e-14!40;UBERON:0002780!3.18e-13!39;UBERON:0001890!3.18e-13!39;UBERON:0006240!3.18e-13!39;UBERON:0007811!3.26e-13!86;UBERON:0000153!9.48e-13!94;UBERON:0002791!1.29e-12!29;UBERON:0003528!1.29e-12!29;UBERON:0001893!1.29e-12!29;UBERON:0000025!2.26e-09!114;UBERON:0000956!3.22e-09!21;UBERON:0001869!3.22e-09!21;UBERON:0000203!3.22e-09!21;UBERON:0004111!4.02e-09!122;UBERON:0002619!5.43e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.85e-29,92;UBERON:0001017,5.81e-25,73;UBERON:0001016,1.71e-23,75;UBERON:0002346,2.47e-23,64;UBERON:0003075,2.47e-23,64;UBERON:0007284,2.47e-23,64;UBERON:0000073,4.79e-23,54;UBERON:0004121,4.56e-22,95;UBERON:0000924,4.56e-22,95;UBERON:0006601,4.56e-22,95;UBERON:0001049,1.61e-21,52;UBERON:0005068,1.61e-21,52;UBERON:0006241,1.61e-21,52;UBERON:0007135,1.61e-21,52;UBERON:0010371,4.15e-20,73;UBERON:0000955,2.22e-18,47;UBERON:0006238,2.22e-18,47;UBERON:0002616,1.20e-17,46;UBERON:0002020,4.43e-17,34;UBERON:0003056,8.50e-17,49;UBERON:0003080,7.90e-15,40;UBERON:0002780,4.07e-14,39;UBERON:0001890,4.07e-14,39;UBERON:0006240,4.07e-14,39;UBERON:0003528,4.31e-14,29;UBERON:0002791,4.31e-14,29;UBERON:0001893,4.31e-14,29;UBERON:0000956,3.83e-10,21;UBERON:0001869,3.83e-10,21;UBERON:0000203,3.83e-10,21;UBERON:0000025,2.02e-09,114;UBERON:0004111,2.88e-09,122;UBERON:0002619,1.04e-08,17;UBERON:0003076,1.56e-07,12;UBERON:0003057,1.56e-07,12|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.387369970324729,0,0,0.513653904676515,0.0797721589953364,1.02720437958723,0.961624426608971,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0,1.87095238332354,1.98581902401771,1.30599894569468,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,0.550640256485045,0,4.57852828398938,5.4921545683618,4.08302788055995,1.81982348112971,1.43752564364972,0,0.725362142011344,0.672187598284928,0.514518872071894,0.573066879877513,1.03134418455488,2.83243045203437,4.23192783417626,1.90149421051854,0.677689064138264,0,0,0,0,3.89480143673926,3.07374644257244,3.31806759387129,1.35005938331691,2.52389953621658,7.42692559449889,3.3130281142742,2.20483438586917,2.49198224647415,1.83843757322004,4.40463523997555,9.95961237064464,9.67721159514334,3.56092976871523,3.84248103130121,1.04182674111352,11.4465029590566,5.6276261003168,7.48711414106369,4.12480019663135,4.41352210477219,2.79599168737951,0.302904773332736,0.831287161174641,2.31891590961342,0,0,0,0,0.448026887097336,2.10666630197628,0.170430322578058,1.55871602761721,0.35333957451034,2.11265129665021,0,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,0.258937883647172,1.1875371125186,1.04091196059682,1.21786191324856,2.07553947530453,1.3565037649736,1.76383060703557,1.13099932196708,0,0.578397427679647,1.76922110389975,2.58826959915855,2.87093973998512,0.969750506270444,1.86391761218122,9.36898550436951,7.74952815209784,0,0.958520996047362,0,0.762421362438388,7.04016005202667,5.03250663100489,2.01046963380583,5.21472960576829,6.39288643325826,9.14267396062064,6.81413304884582,0.712875546952214,0.497627882440372,0,1.47309299120532,1.82168620147785,1.83921683546778,1.26043490863744,1.80845781402858,2.31324097114515,1.40925092313335,2.99845518591132,2.06962696591213,0.431135985865684,1.51284864134255,1.23165786914764,1.53437012699302,1.66828349535359,0.348252166522167,2.05782136407943,0.796137067273973,1.40442637462647,0.257347907114715,0.284163499395593,0.828503090142008,1.17263029990548,1.62055855314913,2.13070262026689,2.55793501271625,2.77680803197281,2.79040733700489,2.95100741539581,1.98501082024188,3.12663714835613,2.13417703302824,4.45878452502207,4.5321996101853,3.95190207523891,2.68412837520744,3.78521907415429,3.19004298375782,0,0,1.70630600428187,0.232236671860439,1.28867461322093,1.21010114774006,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,1.14248512609729,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,1.26473074248515,1.62371162777562,0.627994911365499,0.493588655687202,1.1858105083486,0.667380422864376,0,0.674586337154561,0.405720242777006,0.241177159752417,0,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.252578877947112,0.896987067609561,0,0.554259570499814,1.32643988239339,0.488894929326078,0.339490171550376,0.234690248288502,0.837531287209079,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,1.11618338060241,1.14704320301017,1.03610989119537,0.867894351489069,1.50791283939272,0,0.491764273019036,0.275936746304732,9.15138362930414,6.09500770279457,0.819674726883377,5.30188947129183,0.94652465824877,1.17131623288992,3.44677436372478,0.716906393857656,0.668396022247182,1.13230612315533,2.42886421004937,0.876767573733936,0.790575555893047,6.42642632843614,0.709700426041343,0.712262414669021,0.651547837414304,0.659880491890142,0,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,1.36175842301515,1.26042765821917,1.03486947026204,0.643011105094777,0.886701168211368,1.42695054081656,1.81003922662333,2.74018454203139,0,0,1.10264199027481,0.16488625294148,1.61464426695906,0.784068024066026,0.477489376012546,0.820704498725306,0.874442509889552,8.90041449650446,0,1.65109494370578,1.11116716421827,0.753473828018764,0.27338845544205,0,1.69978429993855,2.79902904647316,1.38199973804424,0,0.474503990371703,0.813277868507395,0.432021363287205,1.25452977608681,0.655087691238533,0.944050424693745,0.909188012978695,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0.992750942742586,0.583353565032143,0.774958940866387,0.844780627453891,0.821500670520278,0.651021924219751,0.419437377702843,0,0.288030006257865,0.632022241256357,0.405450430580328,0.513554785824136,0.909445760844565,0.537080087002444,0.79472541912506,1.20195449519969,1.32920574457119,0.908698049533329,0.914481679859998,1.81487133246313,1.36441033035653,1.15454209968395,2.33753804363138,2.94749498699775,0,0.0897138566094757,0.335769232728157,0.965947970160952,0.93841237725591,0.183151624267265,0.428736758158132,0,3.3885110557024,5.06357760157895,6.30185064783336,5.84300819968538,0.685082519770642,4.5323633843382,2.02506750069542,5.40385443869065,3.17199686288943,4.65984280576638,0.93408612825759,0.798049746802062,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,2.66696073361938,1.03017528619447,1.28367683836726,1.51618327058278,1.77435509923168,1.88626341386076,1.40462261204824,1.40855335290712,1.37845125493472,0.952587382566147,2.0859178670074,1.35036454324594,1.64834360321323,2.06078488188156,1.71434626192708,1.77475806159337,3.09967046931517,1.88950341622027,1.88218760830661,1.18460451048347,2.0122077016005,1.57841826862706,2.03706170768793,1.68342681497322,1.06771516311757,1.97008964751127,0.409231043169689,1.54936841185966,1.73615949883027,2.99772693525535,3.97683734357194,1.71896843238639,3.06061331310149,2.64709702943419,3.01428186306548|short_description=p5@Pfkm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18642 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P47857 | |||
|association_with_transcript=0bp_to_ENSMUST00000051226,NM_001163487,uc007xlv.2_5end | |||
|cluster_id=chr15:97938896..97938912,+ | |||
|description=CAGE_peak_5_at_Pfkm_5end | |||
|id=chr15:97938896..97938912,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.72e-11!44;CL:0000133!7.72e-11!44;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0002319!1.52e-10!43;CL:0000540!1.17e-09!33;CL:0000047!1.17e-09!33;CL:0000031!1.17e-09!33;CL:0000404!1.17e-09!33;CL:0000055!8.03e-09!50;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.84e-12,23;CL:0000337,3.84e-12,23;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44;CL:0002319,2.11e-10,43;CL:0000540,2.99e-09,33;CL:0000047,2.99e-09,33;CL:0000031,2.99e-09,33;CL:0000404,2.99e-09,33;CL:0000393,9.33e-08,39;CL:0000211,9.33e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.99e-24!73;UBERON:0005743!4.99e-24!73;UBERON:0000073!5.32e-23!75;UBERON:0001016!5.32e-23!75;UBERON:0004121!4.71e-22!102;UBERON:0000924!4.71e-22!102;UBERON:0006601!4.71e-22!102;UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!1.68e-20!63;UBERON:0001049!2.71e-19!52;UBERON:0005068!2.71e-19!52;UBERON:0006241!2.71e-19!52;UBERON:0007135!2.71e-19!52;UBERON:0000955!1.54e-18!50;UBERON:0006238!1.54e-18!50;UBERON:0002616!6.94e-18!49;UBERON:0003056!1.62e-15!49;UBERON:0002020!3.44e-15!34;UBERON:0003080!7.56e-14!40;UBERON:0002780!3.18e-13!39;UBERON:0001890!3.18e-13!39;UBERON:0006240!3.18e-13!39;UBERON:0007811!3.26e-13!86;UBERON:0000153!9.48e-13!94;UBERON:0002791!1.29e-12!29;UBERON:0003528!1.29e-12!29;UBERON:0001893!1.29e-12!29;UBERON:0000025!2.26e-09!114;UBERON:0000956!3.22e-09!21;UBERON:0001869!3.22e-09!21;UBERON:0000203!3.22e-09!21;UBERON:0004111!4.02e-09!122;UBERON:0002619!5.43e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.85e-29,92;UBERON:0001017,5.81e-25,73;UBERON:0001016,1.71e-23,75;UBERON:0002346,2.47e-23,64;UBERON:0003075,2.47e-23,64;UBERON:0007284,2.47e-23,64;UBERON:0000073,4.79e-23,54;UBERON:0004121,4.56e-22,95;UBERON:0000924,4.56e-22,95;UBERON:0006601,4.56e-22,95;UBERON:0001049,1.61e-21,52;UBERON:0005068,1.61e-21,52;UBERON:0006241,1.61e-21,52;UBERON:0007135,1.61e-21,52;UBERON:0010371,4.15e-20,73;UBERON:0000955,2.22e-18,47;UBERON:0006238,2.22e-18,47;UBERON:0002616,1.20e-17,46;UBERON:0002020,4.43e-17,34;UBERON:0003056,8.50e-17,49;UBERON:0003080,7.90e-15,40;UBERON:0002780,4.07e-14,39;UBERON:0001890,4.07e-14,39;UBERON:0006240,4.07e-14,39;UBERON:0003528,4.31e-14,29;UBERON:0002791,4.31e-14,29;UBERON:0001893,4.31e-14,29;UBERON:0000956,3.83e-10,21;UBERON:0001869,3.83e-10,21;UBERON:0000203,3.83e-10,21;UBERON:0000025,2.02e-09,114;UBERON:0004111,2.88e-09,122;UBERON:0002619,1.04e-08,17;UBERON:0003076,1.56e-07,12;UBERON:0003057,1.56e-07,12 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.387369970324729,0,0,0.513653904676515,0.0797721589953364,1.02720437958723,0.961624426608971,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0,1.87095238332354,1.98581902401771,1.30599894569468,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,0.550640256485045,0,4.57852828398938,5.4921545683618,4.08302788055995,1.81982348112971,1.43752564364972,0,0.725362142011344,0.672187598284928,0.514518872071894,0.573066879877513,1.03134418455488,2.83243045203437,4.23192783417626,1.90149421051854,0.677689064138264,0,0,0,0,3.89480143673926,3.07374644257244,3.31806759387129,1.35005938331691,2.52389953621658,7.42692559449889,3.3130281142742,2.20483438586917,2.49198224647415,1.83843757322004,4.40463523997555,9.95961237064464,9.67721159514334,3.56092976871523,3.84248103130121,1.04182674111352,11.4465029590566,5.6276261003168,7.48711414106369,4.12480019663135,4.41352210477219,2.79599168737951,0.302904773332736,0.831287161174641,2.31891590961342,0,0,0,0,0.448026887097336,2.10666630197628,0.170430322578058,1.55871602761721,0.35333957451034,2.11265129665021,0,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,0.258937883647172,1.1875371125186,1.04091196059682,1.21786191324856,2.07553947530453,1.3565037649736,1.76383060703557,1.13099932196708,0,0.578397427679647,1.76922110389975,2.58826959915855,2.87093973998512,0.969750506270444,1.86391761218122,9.36898550436951,7.74952815209784,0,0.958520996047362,0,0.762421362438388,7.04016005202667,5.03250663100489,2.01046963380583,5.21472960576829,6.39288643325826,9.14267396062064,6.81413304884582,0.712875546952214,0.497627882440372,0,1.47309299120532,1.82168620147785,1.83921683546778,1.26043490863744,1.80845781402858,2.31324097114515,1.40925092313335,2.99845518591132,2.06962696591213,0.431135985865684,1.51284864134255,1.23165786914764,1.53437012699302,1.66828349535359,0.348252166522167,2.05782136407943,0.796137067273973,1.40442637462647,0.257347907114715,0.284163499395593,0.828503090142008,1.17263029990548,1.62055855314913,2.13070262026689,2.55793501271625,2.77680803197281,2.79040733700489,2.95100741539581,1.98501082024188,3.12663714835613,2.13417703302824,4.45878452502207,4.5321996101853,3.95190207523891,2.68412837520744,3.78521907415429,3.19004298375782,0,0,1.70630600428187,0.232236671860439,1.28867461322093,1.21010114774006,0.22237804384487,0.570676878337677,1.42358718463353,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,1.14248512609729,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,1.26473074248515,1.62371162777562,0.627994911365499,0.493588655687202,1.1858105083486,0.667380422864376,0,0.674586337154561,0.405720242777006,0.241177159752417,0,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.252578877947112,0.896987067609561,0,0.554259570499814,1.32643988239339,0.488894929326078,0.339490171550376,0.234690248288502,0.837531287209079,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,1.11618338060241,1.14704320301017,1.03610989119537,0.867894351489069,1.50791283939272,0,0.491764273019036,0.275936746304732,9.15138362930414,6.09500770279457,0.819674726883377,5.30188947129183,0.94652465824877,1.17131623288992,3.44677436372478,0.716906393857656,0.668396022247182,1.13230612315533,2.42886421004937,0.876767573733936,0.790575555893047,6.42642632843614,0.709700426041343,0.712262414669021,0.651547837414304,0.659880491890142,0,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,1.36175842301515,1.26042765821917,1.03486947026204,0.643011105094777,0.886701168211368,1.42695054081656,1.81003922662333,2.74018454203139,0,0,1.10264199027481,0.16488625294148,1.61464426695906,0.784068024066026,0.477489376012546,0.820704498725306,0.874442509889552,8.90041449650446,0,1.65109494370578,1.11116716421827,0.753473828018764,0.27338845544205,0,1.69978429993855,2.79902904647316,1.38199973804424,0,0.474503990371703,0.813277868507395,0.432021363287205,1.25452977608681,0.655087691238533,0.944050424693745,0.909188012978695,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0.992750942742586,0.583353565032143,0.774958940866387,0.844780627453891,0.821500670520278,0.651021924219751,0.419437377702843,0,0.288030006257865,0.632022241256357,0.405450430580328,0.513554785824136,0.909445760844565,0.537080087002444,0.79472541912506,1.20195449519969,1.32920574457119,0.908698049533329,0.914481679859998,1.81487133246313,1.36441033035653,1.15454209968395,2.33753804363138,2.94749498699775,0,0.0897138566094757,0.335769232728157,0.965947970160952,0.93841237725591,0.183151624267265,0.428736758158132,0,3.3885110557024,5.06357760157895,6.30185064783336,5.84300819968538,0.685082519770642,4.5323633843382,2.02506750069542,5.40385443869065,3.17199686288943,4.65984280576638,0.93408612825759,0.798049746802062,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,2.66696073361938,1.03017528619447,1.28367683836726,1.51618327058278,1.77435509923168,1.88626341386076,1.40462261204824,1.40855335290712,1.37845125493472,0.952587382566147,2.0859178670074,1.35036454324594,1.64834360321323,2.06078488188156,1.71434626192708,1.77475806159337,3.09967046931517,1.88950341622027,1.88218760830661,1.18460451048347,2.0122077016005,1.57841826862706,2.03706170768793,1.68342681497322,1.06771516311757,1.97008964751127,0.409231043169689,1.54936841185966,1.73615949883027,2.99772693525535,3.97683734357194,1.71896843238639,3.06061331310149,2.64709702943419,3.01428186306548 | |||
|short_description=p5@Pfkm | |||
}} |
Latest revision as of 12:54, 1 October 2015
Short description: | p5@Pfkm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pfkm_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000051226, NM_001163487, uc007xlv.2_5end |
EntrezGene: | Pfkm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.84e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-12 | 23 |
ectodermal cell | 9.85e-11 | 44 |
neurectodermal cell | 9.85e-11 | 44 |
neural cell | 2.11e-10 | 43 |
neuron | 2.99e-09 | 33 |
neuronal stem cell | 2.99e-09 | 33 |
neuroblast | 2.99e-09 | 33 |
electrically signaling cell | 2.99e-09 | 33 |
electrically responsive cell | 9.33e-08 | 39 |
electrically active cell | 9.33e-08 | 39 |