FFCP PHASE1:Hg19::chr4:74736459..74736475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:74736459..74736475,+ | |||
|coexpression_cluster_id=C773 | |||
|description=CAGE_peak_at_chr4:74736459..74736475,+ | |||
|id=chr4:74736459..74736475,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.58e-18!32;CL:0000680!3.69e-17!57;CL:0000056!3.69e-17!57;CL:0000355!3.69e-17!57;CL:0000183!1.06e-15!59;CL:0000192!1.22e-15!42;CL:0000514!1.22e-15!42;CL:0000187!1.94e-15!54;CL:0000393!3.30e-14!60;CL:0000211!3.30e-14!60;CL:0000222!3.47e-14!119;CL:0000220!9.37e-14!246;CL:0002321!2.15e-13!248;CL:0002371!1.38e-11!591;CL:0000548!5.86e-10!679;CL:0000004!5.86e-10!679;CL:0000255!5.86e-10!679;CL:0000144!8.73e-10!625;CL:0000012!1.23e-09!682;CL:0000055!4.44e-09!180;CL:0000003!3.70e-08!722;CL:0002539!4.82e-07!10;CL:0000723!5.84e-07!436;CL:0000048!5.95e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.02e-32;32!CL:0000192;5.88e-18;43!CL:0002539;3.46e-14;10!CL:0002595;3.36e-12;5!CL:0002494;2.10e-09;16!CL:0000187;2.25e-09;55!CL:0000393;2.54e-08;61!CL:0000211;2.54e-08;61!CL:0002594;5.17e-08;4!CL:0002592;6.61e-08;3!CL:0000775;4.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.79e-35,32;CL:0000192,3.45e-24,43;CL:0000514,3.45e-24,43;CL:0000680,1.51e-20,58;CL:0000056,1.51e-20,58;CL:0000355,1.51e-20,58;CL:0000187,8.41e-19,55;CL:0000393,3.24e-16,61;CL:0000211,3.24e-16,61;CL:0002539,3.42e-14,10;CL:0000222,2.93e-13,121;CL:0002595,3.34e-12,5;CL:0000048,8.47e-11,427;CL:0000723,2.18e-10,433;CL:0002321,5.67e-10,250;CL:0000034,7.37e-10,441;CL:0002494,1.70e-09,16;CL:0002594,4.56e-08,4;CL:0002592,6.34e-08,3;CL:0000775,3.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;5.88e-18;43!CL:0000355;1.19e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.40e-08;14!DOID:120;2.15e-08;27!DOID:193;1.26e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.48e-08,14;DOID:120,2.00e-08,27;DOID:193,1.17e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.37e-21!79;UBERON:0007798!2.37e-21!79;UBERON:0001637!1.57e-19!42;UBERON:0003509!1.57e-19!42;UBERON:0004572!1.57e-19!42;UBERON:0001009!9.43e-19!113;UBERON:0004535!2.11e-18!110;UBERON:0000055!5.08e-17!69;UBERON:0004573!1.00e-16!33;UBERON:0004571!1.00e-16!33;UBERON:0000486!8.77e-16!82;UBERON:0001134!4.65e-15!61;UBERON:0002036!4.65e-15!61;UBERON:0003082!4.65e-15!61;UBERON:0004872!7.68e-15!84;UBERON:0001981!9.14e-15!60;UBERON:0007500!9.14e-15!60;UBERON:0004537!9.14e-15!60;UBERON:0006965!9.14e-15!60;UBERON:0002385!4.03e-14!63;UBERON:0001015!4.03e-14!63;UBERON:0000383!4.03e-14!63;UBERON:0004290!6.58e-14!70;UBERON:0000914!1.16e-12!83;UBERON:0002329!1.16e-12!83;UBERON:0003077!1.16e-12!83;UBERON:0003059!1.16e-12!83;UBERON:0007282!1.16e-12!83;UBERON:0009618!1.16e-12!83;UBERON:0007285!1.16e-12!83;UBERON:0003914!7.96e-11!118;UBERON:0000490!1.09e-10!138;UBERON:0005256!3.72e-09!143;UBERON:0000477!9.89e-09!286;UBERON:0002204!1.38e-08!167;UBERON:0000119!2.20e-08!312;UBERON:0003081!4.15e-08!216;UBERON:0000483!4.72e-08!309;UBERON:0000923!9.22e-08!604;UBERON:0005291!9.22e-08!604;UBERON:0006598!9.22e-08!604;UBERON:0002532!9.22e-08!604;UBERON:0004111!1.08e-07!241;UBERON:0002050!1.15e-07!605;UBERON:0005423!1.15e-07!605;UBERON:0000467!1.37e-07!625;UBERON:0000480!1.69e-07!626;UBERON:0000926!2.88e-07!448;UBERON:0004120!2.88e-07!448;UBERON:0006603!2.88e-07!448;UBERON:0000468!4.28e-07!659;UBERON:0004237!4.82e-07!10;UBERON:0004695!4.82e-07!10;UBERON:0002111!4.82e-07!10;UBERON:0004178!4.82e-07!10;UBERON:0000922!5.04e-07!612;UBERON:0000481!9.46e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.60e-25;33!UBERON:0004571;2.60e-25;33!UBERON:0001637;7.07e-20;42!UBERON:0003509;7.07e-20;42!UBERON:0004572;7.07e-20;42!UBERON:0004237;3.46e-14;10!UBERON:0004695;3.46e-14;10!UBERON:0002111;3.46e-14;10!UBERON:0004178;3.46e-14;10!UBERON:0003834;3.36e-12;5!UBERON:0001533;3.36e-12;5!UBERON:0000055;2.61e-11;65!UBERON:0007500;1.63e-10;56!UBERON:0001981;1.63e-10;56!UBERON:0004537;1.63e-10;56!UBERON:0001135;7.23e-09;15!UBERON:0000947;7.86e-09;21!UBERON:0010191;7.86e-09;21!UBERON:0003513;1.54e-08;7!UBERON:0002049;1.95e-08;75!UBERON:0007798;1.95e-08;75!UBERON:0001310;5.17e-08;4!UBERON:0003498;6.61e-08;3!UBERON:0005985;6.61e-08;3!UBERON:0001621;6.61e-08;3!UBERON:0000948;8.44e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.53e-29,42;UBERON:0003509,2.53e-29,42;UBERON:0004572,2.53e-29,42;UBERON:0004573,2.61e-28,33;UBERON:0004571,2.61e-28,33;UBERON:0000055,6.27e-23,68;UBERON:0004872,1.65e-22,83;UBERON:0007500,7.57e-22,59;UBERON:0001981,7.57e-22,59;UBERON:0004537,7.57e-22,59;UBERON:0006965,7.57e-22,59;UBERON:0000486,1.33e-19,83;UBERON:0002049,8.70e-19,78;UBERON:0007798,8.70e-19,78;UBERON:0001134,1.07e-18,62;UBERON:0002036,1.07e-18,62;UBERON:0003082,1.07e-18,62;UBERON:0002385,7.34e-18,64;UBERON:0001015,7.34e-18,64;UBERON:0000383,7.34e-18,64;UBERON:0004535,2.83e-17,109;UBERON:0002329,9.24e-17,71;UBERON:0003059,9.24e-17,71;UBERON:0007282,9.24e-17,71;UBERON:0004290,9.24e-17,71;UBERON:0009618,9.24e-17,71;UBERON:0001009,1.58e-16,112;UBERON:0003077,2.05e-16,72;UBERON:0007285,2.05e-16,72;UBERON:0007524,4.46e-16,73;UBERON:0007503,1.59e-14,78;UBERON:0004237,3.42e-14,10;UBERON:0004695,3.42e-14,10;UBERON:0002111,3.42e-14,10;UBERON:0004178,3.42e-14,10;UBERON:0003914,5.00e-13,117;UBERON:0003834,3.34e-12,5;UBERON:0001533,3.34e-12,5;UBERON:0002204,8.11e-12,167;UBERON:0000926,2.48e-11,315;UBERON:0004120,2.48e-11,315;UBERON:0006603,2.48e-11,315;UBERON:0003081,4.43e-11,203;UBERON:0001135,7.18e-09,15;UBERON:0000947,8.59e-09,21;UBERON:0010191,8.59e-09,21;UBERON:0003513,1.54e-08,7;UBERON:0000490,2.96e-08,148;UBERON:0001310,4.56e-08,4;UBERON:0001621,6.34e-08,3;UBERON:0005256,6.87e-08,122;UBERON:0000948,5.14e-07,24;UBERON:0005498,5.14e-07,24;UBERON:0004140,5.14e-07,24;UBERON:0009881,5.14e-07,24;UBERON:0004141,5.14e-07,24;UBERON:0003084,5.14e-07,24;UBERON:0007005,5.14e-07,24;UBERON:0004139,5.14e-07,24;UBERON:0004291,5.14e-07,24;UBERON:0003104,6.83e-07,160;UBERON:0009142,6.83e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1358035148426,10.2458069764076,8.76372108464848,7.80692478064811,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,1.54853185447552,0,0,0.236482229888585,2.41321976515633,0,0,0.188242339542605,0,0.449446968890169,3.06083892370903,0.320929027076094,1.91801137739712,0,0,0,5.80418477257168,0.56738522469114,5.60540024096017,0.502497330513487,0,0.217188844705117,5.44859552370032,2.57794345191295,6.32924774881769,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,4.69870898099936,1.00267582127178,2.02785126545153,0,0.486634870302636,0.945348171640679,0.443458794925128,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.71153252537342,0.66944122552934,0.402829317109147,2.28081631715554,0.24406205754817,1.10298924103761,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0.379891534993739,2.25095607382472,0.286836620748814,0.354668382198357,0,9.60740961567345,1.48000529050296,0,1.75123873690594,0,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0,2.37600571456411,0.989067717114227,0,0,0,0,0,0,0,1.05166641234618,0.907457465280168,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,2.31913023795956,3.54569956768085,1.43402297694502,0,0,0,0,0,0,6.25798129319264,0,0,4.17931135228781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.98775256867763,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,5.4859250149208,11.1116523018387,11.6055032863105,0,0,0.246217006087397,0,0,2.81201501960331,0.671928512795438,2.26840155587818,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.4400297149257,2.19761916788222,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,1.64648067356154,0.325736184293735,0,1.58390374586686,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,2.31650090668127,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,4.49404214368309,17.9496875522415,1.65766205374414,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.260650843404249,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.177561725313127,0.574890092096664,12.9813607295905,0.929683027679674,0,1.00253235151642,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0.211103257785751,0,0.680374821106063,0.431831832204279,0,0,0.501689773854853,1.27438136522519,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,1.16004861950546,0.308097234229289,0,0.413509717453592,0.214840489736547,0.145016693914229,0.255679882248303,0,0.495854746082934,0.192190067365106,1.27612712494584,0,0,0,11.8496335927302,12.0133096268675,15.9691809095107,12.179061889051,8.52491407878032,6.29749501664761,0.744316738719335,0.316379424718726,0,0,0,3.18203247925937,36.1076374491646,0,0,0.235624804691373,14.1527737101321,6.34041284692033,18.9566305307542,0.975267478179181,32.6576076105921,34.8645484297293,0,0.848432591722276,0,5.51365343546124,11.2784625791007,24.9917004594645,0,0,3.65238678532867,1.239293992399,1.97186921772569,0,0,2.1400263088875,0.354761064070598,3.37772216476263,6.58589785919804,0.379473173765715,0.349934720244983,0.673554789078584,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45234820091624,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,9.79396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0.596143835108969,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,2.15361907373044,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.209818352539992,0,3.22717210799121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,1.10043013569766,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0.856396000634902,0.235265819698172,0,0,1.79105763464249,0,0.554805861502613,0.189403005275089,0,2.66943366478961,1.83072054717539,0.151230923763239,6.21748802331122,17.0033422488079,3.98241917909256,18.4419275987078,5.43420349066908,0,0,2.08698024724694,0,2.28483127301277,0.406870733204662,4.18251916165887,2.68526392606221,0.464033759878494,5.17524655308201,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0.139879507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| |||
|short_description=p@chr4:74736459..74736475,+ | |||
}} |
Latest revision as of 06:45, 30 July 2015
Short description: | p@chr4:74736459..74736475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74736459..74736475, + |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.79e-35 | 32 |
smooth muscle cell | 3.45e-24 | 43 |
smooth muscle myoblast | 3.45e-24 | 43 |
muscle precursor cell | 1.51e-20 | 58 |
myoblast | 1.51e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-20 | 58 |
muscle cell | 8.41e-19 | 55 |
electrically responsive cell | 3.24e-16 | 61 |
electrically active cell | 3.24e-16 | 61 |
aortic smooth muscle cell | 3.42e-14 | 10 |
mesodermal cell | 2.93e-13 | 121 |
smooth muscle cell of the subclavian artery | 3.34e-12 | 5 |
multi fate stem cell | 8.47e-11 | 427 |
somatic stem cell | 2.18e-10 | 433 |
embryonic cell | 5.67e-10 | 250 |
stem cell | 7.37e-10 | 441 |
cardiocyte | 1.70e-09 | 16 |
smooth muscle cell of the umbilical artery | 4.56e-08 | 4 |
smooth muscle cell of the coronary artery | 6.34e-08 | 3 |
neutrophil | 3.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.48e-08 | 14 |
female reproductive organ cancer | 2.00e-08 | 27 |
reproductive organ cancer | 1.17e-07 | 29 |