FFCP PHASE1:Mm9::chr15:95358659..95358697,-: Difference between revisions
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{{FFCP|EntrezGene=54003|HGNC=|MCL_coexpression_id=1|UniProt=Q80UM5|association_with_transcript=0bp_to_ENSMUST00000075275,uc007xjq.1_5end|description=CAGE_peak_2_at_Nell2_5end|id=chr15:95358659..95358697,-|ontology_enrichment_celltype=CL:0000540!7.34e-19!33;CL:0000047!7.34e-19!33;CL:0000031!7.34e-19!33;CL:0000404!7.34e-19!33;CL:0002319!5.90e-18!43;CL:0000221!6.16e-18!44;CL:0000133!6.16e-18!44;CL:0000117!6.62e-15!23;CL:0000337!6.62e-15!23;CL:0000393!4.48e-13!39;CL:0000211!4.48e-13!39;CL:0000055!1.74e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.30e-22,33;CL:0000047,5.30e-22,33;CL:0000031,5.30e-22,33;CL:0000404,5.30e-22,33;CL:0002319,2.80e-19,43;CL:0000221,1.74e-18,44;CL:0000133,1.74e-18,44;CL:0000117,6.11e-18,23;CL:0000337,6.11e-18,23;CL:0000393,1.90e-16,39;CL:0000211,1.90e-16,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.29e-39!73;UBERON:0005743!2.29e-39!73;UBERON:0000073!8.29e-38!75;UBERON:0001016!8.29e-38!75;UBERON:0004121!9.55e-31!102;UBERON:0000924!9.55e-31!102;UBERON:0006601!9.55e-31!102;UBERON:0002346!8.09e-30!71;UBERON:0003075!8.09e-30!71;UBERON:0007284!8.09e-30!71;UBERON:0001049!1.08e-28!52;UBERON:0005068!1.08e-28!52;UBERON:0006241!1.08e-28!52;UBERON:0007135!1.08e-28!52;UBERON:0000955!2.72e-27!50;UBERON:0006238!2.72e-27!50;UBERON:0002616!8.70e-27!49;UBERON:0000033!1.47e-26!63;UBERON:0003056!1.63e-23!49;UBERON:0003080!2.84e-22!40;UBERON:0002780!9.45e-22!39;UBERON:0001890!9.45e-22!39;UBERON:0006240!9.45e-22!39;UBERON:0002020!1.91e-21!34;UBERON:0002791!3.60e-18!29;UBERON:0003528!3.60e-18!29;UBERON:0001893!3.60e-18!29;UBERON:0000153!4.93e-16!94;UBERON:0007811!7.38e-16!86;UBERON:0000956!6.73e-14!21;UBERON:0001869!6.73e-14!21;UBERON:0000203!6.73e-14!21;UBERON:0002619!1.68e-11!17;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.15e-45,73;UBERON:0001016,3.21e-43,75;UBERON:0002346,2.10e-36,64;UBERON:0003075,2.10e-36,64;UBERON:0007284,2.10e-36,64;UBERON:0004121,2.99e-36,95;UBERON:0000924,2.99e-36,95;UBERON:0006601,2.99e-36,95;UBERON:0000073,5.47e-35,54;UBERON:0001049,5.50e-33,52;UBERON:0005068,5.50e-33,52;UBERON:0006241,5.50e-33,52;UBERON:0007135,5.50e-33,52;UBERON:0000955,9.05e-29,47;UBERON:0006238,9.05e-29,47;UBERON:0010371,9.20e-29,73;UBERON:0002616,3.66e-28,46;UBERON:0003056,5.36e-27,49;UBERON:0003080,5.11e-26,40;UBERON:0002780,2.23e-25,39;UBERON:0001890,2.23e-25,39;UBERON:0006240,2.23e-25,39;UBERON:0002020,5.98e-25,34;UBERON:0003528,6.09e-21,29;UBERON:0002791,6.09e-21,29;UBERON:0001893,6.09e-21,29;UBERON:0010314,3.57e-19,92;UBERON:0000956,1.08e-15,21;UBERON:0001869,1.08e-15,21;UBERON:0000203,1.08e-15,21;UBERON:0002619,9.23e-13,17;UBERON:0002021,2.79e-10,10;UBERON:0000411,2.79e-10,10;UBERON:0001950,2.79e-10,10;UBERON:0003076,2.66e-07,12;UBERON:0003057,2.66e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.19483016055474,1.09843091367236,0.972149495371417,1.1198913730029,1.43752564364972,0,0,0,0,0,0,28.3243045203437,25.9205579843296,27.8885817542719,0,0,0,0,0,2.99600110518405,3.07374644257244,17.6272340924412,17.2807601064564,15.1433972172995,23.1377297367081,14.7981922437581,19.9660002720375,24.1530586965956,33.0918763179608,16.5173821499083,24.2605942361857,23.1945865216928,22.5525552018631,20.3102568797349,18.2319679694866,7.53794097303729,8.4414391504752,14.515833538797,24.4541725943144,21.0710087582672,29.2647129945722,0.151452386666368,0,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,1.56136794089522,0.608930956624282,1.84492397804847,0.904335843315735,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,14.3462590535658,15.7085030110091,0,0,0,0,10.6351353977424,11.4375150704657,14.5759048450923,37.0245802009549,41.4259040875135,19.1165000994795,23.6872244078926,0.509196819251581,0,0,0,0.910843100738926,5.74755261083682,9.18316862007281,6.93242162044289,7.14383241088942,3.33095672740609,4.02917415606834,1.29351685369508,0.215567992932842,1.13463648100692,2.81521798662318,1.97276159184817,2.78047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0.720248245844059,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,71.2882925632391,21.6099685996497,0,0,2.34617075588757,2.55460339046482,2.19074684247559,1.81515172161008,0.889512175379481,0.380451252225118,0,0.658795818896044,1.00534083520108,0.397912944082302,0.779856348476481,0,0,0,1.70701110857774,1.02823661348756,3.38123207019241,0.814605311381257,0.581857461502877,0.841629838683823,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.667380422864376,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.25972324078405,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54003 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80UM5 | |||
|association_with_transcript=0bp_to_ENSMUST00000075275,uc007xjq.1_5end | |||
|cluster_id=chr15:95358659..95358697,- | |||
|description=CAGE_peak_2_at_Nell2_5end | |||
|id=chr15:95358659..95358697,- | |||
|ontology_enrichment_celltype=CL:0000540!7.34e-19!33;CL:0000047!7.34e-19!33;CL:0000031!7.34e-19!33;CL:0000404!7.34e-19!33;CL:0002319!5.90e-18!43;CL:0000221!6.16e-18!44;CL:0000133!6.16e-18!44;CL:0000117!6.62e-15!23;CL:0000337!6.62e-15!23;CL:0000393!4.48e-13!39;CL:0000211!4.48e-13!39;CL:0000055!1.74e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.30e-22,33;CL:0000047,5.30e-22,33;CL:0000031,5.30e-22,33;CL:0000404,5.30e-22,33;CL:0002319,2.80e-19,43;CL:0000221,1.74e-18,44;CL:0000133,1.74e-18,44;CL:0000117,6.11e-18,23;CL:0000337,6.11e-18,23;CL:0000393,1.90e-16,39;CL:0000211,1.90e-16,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.29e-39!73;UBERON:0005743!2.29e-39!73;UBERON:0000073!8.29e-38!75;UBERON:0001016!8.29e-38!75;UBERON:0004121!9.55e-31!102;UBERON:0000924!9.55e-31!102;UBERON:0006601!9.55e-31!102;UBERON:0002346!8.09e-30!71;UBERON:0003075!8.09e-30!71;UBERON:0007284!8.09e-30!71;UBERON:0001049!1.08e-28!52;UBERON:0005068!1.08e-28!52;UBERON:0006241!1.08e-28!52;UBERON:0007135!1.08e-28!52;UBERON:0000955!2.72e-27!50;UBERON:0006238!2.72e-27!50;UBERON:0002616!8.70e-27!49;UBERON:0000033!1.47e-26!63;UBERON:0003056!1.63e-23!49;UBERON:0003080!2.84e-22!40;UBERON:0002780!9.45e-22!39;UBERON:0001890!9.45e-22!39;UBERON:0006240!9.45e-22!39;UBERON:0002020!1.91e-21!34;UBERON:0002791!3.60e-18!29;UBERON:0003528!3.60e-18!29;UBERON:0001893!3.60e-18!29;UBERON:0000153!4.93e-16!94;UBERON:0007811!7.38e-16!86;UBERON:0000956!6.73e-14!21;UBERON:0001869!6.73e-14!21;UBERON:0000203!6.73e-14!21;UBERON:0002619!1.68e-11!17;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.15e-45,73;UBERON:0001016,3.21e-43,75;UBERON:0002346,2.10e-36,64;UBERON:0003075,2.10e-36,64;UBERON:0007284,2.10e-36,64;UBERON:0004121,2.99e-36,95;UBERON:0000924,2.99e-36,95;UBERON:0006601,2.99e-36,95;UBERON:0000073,5.47e-35,54;UBERON:0001049,5.50e-33,52;UBERON:0005068,5.50e-33,52;UBERON:0006241,5.50e-33,52;UBERON:0007135,5.50e-33,52;UBERON:0000955,9.05e-29,47;UBERON:0006238,9.05e-29,47;UBERON:0010371,9.20e-29,73;UBERON:0002616,3.66e-28,46;UBERON:0003056,5.36e-27,49;UBERON:0003080,5.11e-26,40;UBERON:0002780,2.23e-25,39;UBERON:0001890,2.23e-25,39;UBERON:0006240,2.23e-25,39;UBERON:0002020,5.98e-25,34;UBERON:0003528,6.09e-21,29;UBERON:0002791,6.09e-21,29;UBERON:0001893,6.09e-21,29;UBERON:0010314,3.57e-19,92;UBERON:0000956,1.08e-15,21;UBERON:0001869,1.08e-15,21;UBERON:0000203,1.08e-15,21;UBERON:0002619,9.23e-13,17;UBERON:0002021,2.79e-10,10;UBERON:0000411,2.79e-10,10;UBERON:0001950,2.79e-10,10;UBERON:0003076,2.66e-07,12;UBERON:0003057,2.66e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.19483016055474,1.09843091367236,0.972149495371417,1.1198913730029,1.43752564364972,0,0,0,0,0,0,28.3243045203437,25.9205579843296,27.8885817542719,0,0,0,0,0,2.99600110518405,3.07374644257244,17.6272340924412,17.2807601064564,15.1433972172995,23.1377297367081,14.7981922437581,19.9660002720375,24.1530586965956,33.0918763179608,16.5173821499083,24.2605942361857,23.1945865216928,22.5525552018631,20.3102568797349,18.2319679694866,7.53794097303729,8.4414391504752,14.515833538797,24.4541725943144,21.0710087582672,29.2647129945722,0.151452386666368,0,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,1.56136794089522,0.608930956624282,1.84492397804847,0.904335843315735,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,14.3462590535658,15.7085030110091,0,0,0,0,10.6351353977424,11.4375150704657,14.5759048450923,37.0245802009549,41.4259040875135,19.1165000994795,23.6872244078926,0.509196819251581,0,0,0,0.910843100738926,5.74755261083682,9.18316862007281,6.93242162044289,7.14383241088942,3.33095672740609,4.02917415606834,1.29351685369508,0.215567992932842,1.13463648100692,2.81521798662318,1.97276159184817,2.78047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0.720248245844059,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,71.2882925632391,21.6099685996497,0,0,2.34617075588757,2.55460339046482,2.19074684247559,1.81515172161008,0.889512175379481,0.380451252225118,0,0.658795818896044,1.00534083520108,0.397912944082302,0.779856348476481,0,0,0,1.70701110857774,1.02823661348756,3.38123207019241,0.814605311381257,0.581857461502877,0.841629838683823,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.667380422864376,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.25972324078405,0,0,9.78075480190396,11.3227235846025,14.2179442503647,5.01834475700359,5.79276552614225,8.77537245445381,14.5731852602962,13.151513606009,14.2303600060748,7.71171159412337,0,0.712262414669021,0.325773918707152,0,0,1.45668381692989,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0,0,0,0,0,0,4.42571487479924,2.70091641046965,2.19909762430683,2.7863814554107,5.49754724291048,8.38333442729732,4.60737257685939,7.30715877875038,0.23467170806371,0,0,0,0,0.180938774784468,0.119372344003136,0,0,7.04616147639937,0,1.23832120777933,0.740778109478847,0,0,0.228778173206523,0,0,0,0,3.00519193902079,2.23651413839534,1.72808545314882,0.627264888043406,0,0.674321731924103,1.1571483801547,0,0.518459893167171,0,0,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,0.337912250981556,0.469428954583016,0.911430693907651,0.104859344425711,0.241584120826006,0,0.316011120628178,3.85177909051312,0.410843828659309,0.129920822977795,0.537080087002444,0.39736270956253,0.360586348559907,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,48.0039066224507,37.7466693935885,33.8008352929244,57.9145224498227,43.8452812653211,31.7265436903674,31.7260575108949,33.3237690385923,38.5171047636574,31.583379016861,2.28332164685189,6.3843979744165,5.29274177837816,4.86213434136588,2.09613162627982,2.02227859295016,3.55594764482584,3.7086310303001,2.24643446714271,3.53776096469316,3.54871019846336,3.01802146217722,2.06011316433741,3.07320731543373,3.84817642002609,5.23923060411381,3.59241410429052,3.6652751888104,3.70877310722976,2.64958056241915,2.74295401908332,2.12970967391205,1.43061713968393,4.36039249896986,3.76437521661322,2.19997980518359,2.92684756596436,3.94604567156764,3.25929873230068,1.12228454331548,2.96587545310435,3.44765688314472,2.45538625901814,3.09873682371932,2.12197272079256,6.74488560432454,3.27504251823572,3.43793686477277,1.53030665655075,0.220591419119515,0.927471342481686 | |||
|short_description=p2@Nell2 | |||
}} |
Latest revision as of 11:07, 1 October 2015
Short description: | p2@Nell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000075275, uc007xjq.1_5end |
EntrezGene: | Nell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.30e-22 | 33 |
neuronal stem cell | 5.30e-22 | 33 |
neuroblast | 5.30e-22 | 33 |
electrically signaling cell | 5.30e-22 | 33 |
neural cell | 2.80e-19 | 43 |
ectodermal cell | 1.74e-18 | 44 |
neurectodermal cell | 1.74e-18 | 44 |
CNS neuron (sensu Vertebrata) | 6.11e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.11e-18 | 23 |
electrically responsive cell | 1.90e-16 | 39 |
electrically active cell | 1.90e-16 | 39 |