FFCP PHASE1:Hg19::chr4:682960..683012,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26177 | |||
|TSSclassifier=strong | |||
|UniProt=D6RED0,D6R9R0,Q6UXD7 | |||
|association_with_transcript=0bp_to_ENST00000512249,ENST00000515118,NM_032219,uc003gax.2,uc003gay.2,uc003gaz.2,uc003gba.2_5end | |||
|cluster_id=chr4:682960..683012,- | |||
|description=CAGE_peak_1_at_MFSD7_5end | |||
|id=chr4:682960..683012,- | |||
|ontology_enrichment_celltype=CL:0000766!2.39e-22!76;CL:0002057!7.30e-21!42;CL:0002194!1.54e-20!63;CL:0000576!1.54e-20!63;CL:0000040!1.54e-20!63;CL:0000559!1.54e-20!63;CL:0002009!2.39e-20!65;CL:0000557!3.21e-20!71;CL:0000839!1.47e-19!70;CL:0000860!1.35e-17!45;CL:0002320!1.09e-14!365;CL:0000048!7.99e-14!430;CL:0000134!9.75e-14!358;CL:0000723!1.78e-12!436;CL:0000034!3.78e-12!444;CL:0000219!2.88e-09!390;CL:0000763!4.79e-08!112;CL:0000049!4.79e-08!112;CL:0000136!2.87e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.84e-18;39!CL:0000234;5.84e-18;39!CL:0000860;1.03e-16;33!CL:0002057;1.03e-16;33!CL:0000576;2.44e-15;48!CL:0000766;4.74e-13;69!CL:0002334;3.14e-07;12!CL:0000136;3.39e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.81e-29,72;CL:0000473,2.70e-28,48;CL:0000234,2.70e-28,48;CL:0002194,1.58e-26,59;CL:0000576,1.58e-26,59;CL:0000040,1.58e-26,59;CL:0000559,1.58e-26,59;CL:0000557,9.10e-26,67;CL:0000839,9.67e-26,66;CL:0002009,1.21e-25,61;CL:0000860,9.91e-24,42;CL:0002057,9.91e-24,42;CL:0002320,4.40e-18,361;CL:0000134,3.60e-17,354;CL:0000048,1.30e-14,427;CL:0000723,1.82e-13,433;CL:0000034,1.02e-12,441;CL:0000763,2.01e-12,108;CL:0000049,2.01e-12,108;CL:0000219,1.48e-11,386;CL:0000136,4.06e-08,15;CL:0002334,2.27e-07,12;CL:0000738,3.87e-07,136;CL:0002393,7.90e-07,9;CL:0002397,7.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.52e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.52e-19!80;UBERON:0002193!1.94e-18!112;UBERON:0002390!2.81e-17!102;UBERON:0003061!2.81e-17!102;UBERON:0002405!2.92e-16!115;UBERON:0003081!1.00e-15!216;UBERON:0001474!2.56e-15!86;UBERON:0004765!3.91e-15!101;UBERON:0001434!3.91e-15!101;UBERON:0002204!1.25e-13!167;UBERON:0002384!1.29e-13!375;UBERON:0007023!4.50e-08!115;UBERON:0000926!9.01e-08!448;UBERON:0004120!9.01e-08!448;UBERON:0006603!9.01e-08!448;UBERON:0000468!1.33e-07!659;UBERON:0001013!4.60e-07!14;UBERON:0000467!9.49e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.24e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-24,76;UBERON:0002193,2.41e-22,108;UBERON:0002390,7.23e-22,98;UBERON:0003061,7.23e-22,98;UBERON:0002405,8.39e-22,93;UBERON:0001474,2.65e-20,82;UBERON:0004765,1.20e-18,90;UBERON:0001434,1.27e-18,100;UBERON:0002384,1.79e-17,371;UBERON:0003081,1.66e-15,203;UBERON:0000926,4.86e-15,315;UBERON:0004120,4.86e-15,315;UBERON:0006603,4.86e-15,315;UBERON:0002204,5.69e-13,167;UBERON:0000479,1.14e-08,773;UBERON:0001013,6.96e-08,14 | |||
|phase1_expression=5.99538651592837,4.71021152560163,3.24195129420734,5.00366491765652,3.5756887554183,1.74467704820074,2.53299878168311,7.58063848112197,6.26845507679612,0.982935746006035,3.48900583986214,0.218441372130172,0.527533956456907,1.8564952944007,2.65117900582333,0,0,0,0.487932798790507,0.492484232307152,1.22400414746552,0.626909442956176,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,1.96682138424452,1.53531759238885,2.94150634300544,0.919421224478927,0.30120591877825,0.369754010166788,0,0,1.76160263600908,4.43196326825502,6.21687787157439,5.859293509328,8.50878802111712,6.15397965436061,7.46969146139141,4.36194716338694,4.91238726795452,8.00527401919793,3.95129362739664,2.87817521615278,4.02618282163635,4.31538588483226,5.12321413058201,4.02019790810595,6.20542225325913,2.5819387343353,9.47985406160392,5.83551252582075,4.91231070104122,3.37085226667627,6.73384563215986,1.28371610830437,1.91801137739712,4.61791820261403,7.18069167437875,5.96714650745772,4.64334781805734,2.8369261234557,4.35975574296902,6.02996796616184,4.17186334736161,5.86409880703815,5.44859552370032,5.89244217580104,4.1140110367315,6.97142444829408,5.10250319916104,5.45112478321777,5.50410292617826,4.35512989240368,4.66104201421532,6.55529310604872,4.77400025277816,2.92262646023414,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.205601498999509,0.668745981562712,0.977766799900771,0.946895611469467,1.94826728407911,0.111410456885174,0,0,0.812411591295047,0,0.390178042679635,0.986627427622057,0.552700035571697,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.637130828648193,0,0.950452044448374,0.602300476311091,0.255973222308837,1.24930726552346,0.710331756132051,0,0.201606743224732,0.267440195783507,0.579297615531196,4.87613732627923,0.670700859703636,0.895037932904712,4.3372698286148,3.50936537445123,9.12533069453189,3.1811437882044,4.86634870302636,1.60709189178915,0.221729397462564,1.75669571386252,1.57174890597255,0,0,5.8418530857843,5.74628133087582,8.11043559165077,0.715471872916026,2.28797964312051,0.74291500265913,0.39752481473341,0.860234595106124,0.347140501607594,1.69592382577203,1.25849830862972,0.275118041940067,0.208994966536811,1.29208379584664,1.06729878806013,2.34304428935269,4.43112248820062,1.52054421143703,3.90499292077071,0,1.62028389576352,1.25019619597712,1.34717623575702,1.12611480483322,1.53316637465883,0.949265659568129,1.46561395144326,2.63560834872127,3.87780264148325,0,8.94549513051573,0.12663051166458,0.264818361626438,1.72101972449288,2.12801029319014,0.560677600142307,0,0,1.55605517699883,0.67355336034844,0.653847612453835,1.36221684880438,0.576175924479999,1.64025002283658,3.43376084513353,0,4.03511437489863,0.117434498643765,0.323745888736263,0.280901613404497,1.63323337003915,0.737005903870608,2.9964476540972,2.37600571456411,3.4617370098998,0.910161361938026,7.18618141816238,0.168336113954066,0.875829639103749,1.93944880838928,1.31693286264251,3.0648779579902,2.40380894250555,0.567160915800105,2.15267562826634,0.213557388818567,4.02670612203168,5.10154863343484,1.54578793857658,7.72921620136887,2.41951913231067,6.07594796068558,2.14361411354637,3.78650661366172,1.74894807420369,1.13152239773168,3.90510551768276,0.806016785821122,1.18692414617341,0.386521706326594,0.272746120590835,0,1.09776335516636,1.06023814657188,0.929551542956147,0.725627385107593,0.756962552626885,1.09493207722749,9.38697193978896,3.85944562915731,0,3.71494342425583,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,0,1.6462960453256,7.3504355692771,2.53510069643662,3.9313088667105,1.18157981336281,0,0,1.3725424823882,0,0,0,0.277765335475589,0.977424915930974,3.11980435583874,0,1.04337364477569,0.70445216541493,2.16549671641611,1.38895653772983,1.33177906564219,0,0,9.1100292252337,12.8702345826581,12.3363864699644,0,0.16798212819886,0.567100388969546,0,0,0,0,1.40877494421162,4.56121854189699,5.04419836959365,6.81709140502452,0.253991577168676,2.67391897890794,1.17217447210047,0,0.719792448923265,0.901029173531752,0,1.34557301214433,1.74384027533312,0.7333828582095,3.49033632546,14.3062578340753,4.22651376278,1.06375246633948,1.04007436911366,1.02882949704857,0,0.532844358032199,0.428933980974443,5.96883765930587,0.823240336780769,1.62868092146868,1.06617584622764,0,2.41151501647669,2.61460037580088,3.09916272664377,9.72990245129524,12.054170194371,4.21667878966063,0,1.14861935834114,0,3.76431397335706,0.410952645100767,0.895304816199478,0,0.985153801009636,0,1.92514554419623,0,0,0,0.670065061337395,0,6.74106321552464,0,2.07207756718018,0.858840442033979,1.50051156317903,1.35632511849868,2.28767947683888,2.85486382075459,3.94256037584837,3.86566669475954,1.20378439891088,2.27407504055985,3.10419213877515,0,0.737476674166813,1.82455590382974,2.74121620447837,1.71571711905428,1.6541442089831,4.09856981555372,1.921096040462,0,1.66435439510497,1.81434175997808,4.96215615637554,7.67309866440312,3.648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| |||
|short_description=p1@MFSD7 | |||
}} |
Latest revision as of 06:57, 18 September 2015
Short description: | p1@MFSD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MFSD7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512249, ENST00000515118, NM_032219, uc003gax.2, uc003gay.2, uc003gaz.2, uc003gba.2_5end |
EntrezGene: | MFSD7 |
HGNC: | 26177 |
UniProt: | D6RED0D6R9R0Q6UXD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.81e-29 | 72 |
defensive cell | 2.70e-28 | 48 |
phagocyte | 2.70e-28 | 48 |
monopoietic cell | 1.58e-26 | 59 |
monocyte | 1.58e-26 | 59 |
monoblast | 1.58e-26 | 59 |
promonocyte | 1.58e-26 | 59 |
granulocyte monocyte progenitor cell | 9.10e-26 | 67 |
myeloid lineage restricted progenitor cell | 9.67e-26 | 66 |
macrophage dendritic cell progenitor | 1.21e-25 | 61 |
classical monocyte | 9.91e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.91e-24 | 42 |
connective tissue cell | 4.40e-18 | 361 |
mesenchymal cell | 3.60e-17 | 354 |
multi fate stem cell | 1.30e-14 | 427 |
somatic stem cell | 1.82e-13 | 433 |
stem cell | 1.02e-12 | 441 |
myeloid cell | 2.01e-12 | 108 |
common myeloid progenitor | 2.01e-12 | 108 |
motile cell | 1.48e-11 | 386 |
fat cell | 4.06e-08 | 15 |
preadipocyte | 2.27e-07 | 12 |
leukocyte | 3.87e-07 | 136 |
intermediate monocyte | 7.90e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-24 | 76 |
hemolymphoid system | 2.41e-22 | 108 |
hematopoietic system | 7.23e-22 | 98 |
blood island | 7.23e-22 | 98 |
immune system | 8.39e-22 | 93 |
bone element | 2.65e-20 | 82 |
skeletal element | 1.20e-18 | 90 |
skeletal system | 1.27e-18 | 100 |
connective tissue | 1.79e-17 | 371 |
lateral plate mesoderm | 1.66e-15 | 203 |
mesoderm | 4.86e-15 | 315 |
mesoderm-derived structure | 4.86e-15 | 315 |
presumptive mesoderm | 4.86e-15 | 315 |
musculoskeletal system | 5.69e-13 | 167 |
tissue | 1.14e-08 | 773 |
adipose tissue | 6.96e-08 | 14 |