FFCP PHASE1:Mm9::chr15:81524625..81524671,-: Difference between revisions
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{{FFCP|EntrezGene=214685|HGNC=|MCL_coexpression_id=13|UniProt=G3UY83|association_with_transcript=0bp_to_ENSMUST00000173898_5end|description=CAGE_peak_2_at_Chadl_5end|id=chr15:81524625..81524671,-|ontology_enrichment_celltype=CL:0000055!5.57e-17!50;CL:0002319!9.39e-15!43;CL:0000221!1.07e-14!44;CL:0000133!1.07e-14!44;CL:0000393!1.73e-14!39;CL:0000211!1.73e-14!39;CL:0000117!1.93e-13!23;CL:0000337!1.93e-13!23;CL:0000540!1.68e-12!33;CL:0000047!1.68e-12!33;CL:0000031!1.68e-12!33;CL:0000404!1.68e-12!33;CL:0002321!1.62e-07!70;CL:0000220!1.62e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-15,23;CL:0000337,1.22e-15,23;CL:0002319,2.53e-15,43;CL:0000221,2.80e-15,44;CL:0000133,2.80e-15,44;CL:0000393,3.37e-15,39;CL:0000211,3.37e-15,39;CL:0000540,7.26e-13,33;CL:0000047,7.26e-13,33;CL:0000031,7.26e-13,33;CL:0000404,7.26e-13,33;CL:0002321,6.32e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.63e-28!73;UBERON:0005743!1.63e-28!73;UBERON:0000073!6.65e-28!75;UBERON:0001016!6.65e-28!75;UBERON:0004121!9.92e-24!102;UBERON:0000924!9.92e-24!102;UBERON:0006601!9.92e-24!102;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0000955!9.15e-21!50;UBERON:0006238!9.15e-21!50;UBERON:0002616!3.61e-20!49;UBERON:0000033!4.86e-20!63;UBERON:0002020!1.16e-19!34;UBERON:0002346!1.59e-19!71;UBERON:0003075!1.59e-19!71;UBERON:0007284!1.59e-19!71;UBERON:0002791!2.92e-16!29;UBERON:0003528!2.92e-16!29;UBERON:0001893!2.92e-16!29;UBERON:0003080!8.28e-16!40;UBERON:0002780!2.36e-15!39;UBERON:0001890!2.36e-15!39;UBERON:0006240!2.36e-15!39;UBERON:0003056!1.43e-14!49;UBERON:0000956!4.61e-12!21;UBERON:0001869!4.61e-12!21;UBERON:0000203!4.61e-12!21;UBERON:0004111!3.94e-11!122;UBERON:0000025!1.09e-10!114;UBERON:0002619!4.04e-10!17;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0003076!1.83e-07!12;UBERON:0003057!1.83e-07!12;UBERON:0000153!3.64e-07!94;UBERON:0007811!8.50e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-29,73;UBERON:0001016,8.99e-29,75;UBERON:0000073,1.03e-25,54;UBERON:0001049,2.19e-24,52;UBERON:0005068,2.19e-24,52;UBERON:0006241,2.19e-24,52;UBERON:0007135,2.19e-24,52;UBERON:0002020,5.09e-23,34;UBERON:0004121,1.32e-22,95;UBERON:0000924,1.32e-22,95;UBERON:0006601,1.32e-22,95;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0000955,1.68e-20,47;UBERON:0006238,1.68e-20,47;UBERON:0002616,8.01e-20,46;UBERON:0003528,5.53e-19,29;UBERON:0002791,5.53e-19,29;UBERON:0001893,5.53e-19,29;UBERON:0010371,1.52e-17,73;UBERON:0003080,1.38e-16,40;UBERON:0002780,4.64e-16,39;UBERON:0001890,4.64e-16,39;UBERON:0006240,4.64e-16,39;UBERON:0010314,2.49e-14,92;UBERON:0003056,3.23e-14,49;UBERON:0000956,5.26e-14,21;UBERON:0001869,5.26e-14,21;UBERON:0000203,5.26e-14,21;UBERON:0002619,1.05e-11,17;UBERON:0004111,3.03e-10,122;UBERON:0000025,5.18e-10,114;UBERON:0002021,8.30e-09,10;UBERON:0000411,8.30e-09,10;UBERON:0001950,8.30e-09,10;UBERON:0003076,1.46e-08,12;UBERON:0003057,1.46e-08,12|phase1_expression=2.24208385946712,0,0,0,0,0.16787927191189,0,0.645616617207881,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0,2.12608225377674,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0.7813353445238,0,0,0,0,4.65818226509636,4.66333883609767,2.38610777810186,9.38869613217647,1.96222640742402,1.75748946187577,2.52758868796568,1.67983705950435,2.87505128729943,0,0,0,1.80081605225163,1.71920063963254,3.09403255366465,5.26022798234954,10.5798195854407,12.0427966666174,1.69422266034566,2.66788438833342,0.899899717281399,2.96659908770092,0,4.49400165777607,7.30014780110954,2.90330914463737,6.21027316325777,4.83747411108179,10.2834354385369,10.6016899656774,2.44981598429908,2.58782771749238,10.1114066527102,3.30347642998166,5.36286819957788,5.83704826373725,6.72620067423989,6.86157327018072,7.8137005583514,2.23346399201105,8.4414391504752,5.50073691996516,11.1958862479994,8.96941589034349,8.01517617048792,0.530083353332288,1.13357340160178,1.44932244350839,1.72084775396277,0,1.07940638327563,0.649776417447669,1.34408066129201,1.54488862144927,1.53387290320252,2.07828803682295,0.70667914902068,1.26759077799012,0,0,0,1.73192832808971,1.52015919285059,0,1.1418387971906,0,2.3750742250372,0.520455980298408,0.304465478312141,1.15307748628029,0.904335843315735,0.23517741427141,1.25666591329675,0,4.48258006451726,1.76922110389975,1.45590164952668,0.883366073841574,1.45462575940567,0,7.02673912827713,4.60782754989601,0.255457055208591,0.11981512450592,0,0,3.59497534571574,2.74500361691176,11.8115090986093,6.60532416730651,5.8814555185976,6.44142938134636,4.38051410282946,1.32391173005411,0.622034853050465,1.0108910337347,2.10441855886474,0.650602214813519,0.689706313300419,0.540186389416048,1.80845781402858,1.02054748726992,0.512454881139399,2.15513966487376,1.03481348295606,0.215567992932842,1.51284864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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214685 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3UY83 | |||
|association_with_transcript=0bp_to_ENSMUST00000173898_5end | |||
|cluster_id=chr15:81524625..81524671,- | |||
|description=CAGE_peak_2_at_Chadl_5end | |||
|id=chr15:81524625..81524671,- | |||
|ontology_enrichment_celltype=CL:0000055!5.57e-17!50;CL:0002319!9.39e-15!43;CL:0000221!1.07e-14!44;CL:0000133!1.07e-14!44;CL:0000393!1.73e-14!39;CL:0000211!1.73e-14!39;CL:0000117!1.93e-13!23;CL:0000337!1.93e-13!23;CL:0000540!1.68e-12!33;CL:0000047!1.68e-12!33;CL:0000031!1.68e-12!33;CL:0000404!1.68e-12!33;CL:0002321!1.62e-07!70;CL:0000220!1.62e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-15,23;CL:0000337,1.22e-15,23;CL:0002319,2.53e-15,43;CL:0000221,2.80e-15,44;CL:0000133,2.80e-15,44;CL:0000393,3.37e-15,39;CL:0000211,3.37e-15,39;CL:0000540,7.26e-13,33;CL:0000047,7.26e-13,33;CL:0000031,7.26e-13,33;CL:0000404,7.26e-13,33;CL:0002321,6.32e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-28!73;UBERON:0005743!1.63e-28!73;UBERON:0000073!6.65e-28!75;UBERON:0001016!6.65e-28!75;UBERON:0004121!9.92e-24!102;UBERON:0000924!9.92e-24!102;UBERON:0006601!9.92e-24!102;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0000955!9.15e-21!50;UBERON:0006238!9.15e-21!50;UBERON:0002616!3.61e-20!49;UBERON:0000033!4.86e-20!63;UBERON:0002020!1.16e-19!34;UBERON:0002346!1.59e-19!71;UBERON:0003075!1.59e-19!71;UBERON:0007284!1.59e-19!71;UBERON:0002791!2.92e-16!29;UBERON:0003528!2.92e-16!29;UBERON:0001893!2.92e-16!29;UBERON:0003080!8.28e-16!40;UBERON:0002780!2.36e-15!39;UBERON:0001890!2.36e-15!39;UBERON:0006240!2.36e-15!39;UBERON:0003056!1.43e-14!49;UBERON:0000956!4.61e-12!21;UBERON:0001869!4.61e-12!21;UBERON:0000203!4.61e-12!21;UBERON:0004111!3.94e-11!122;UBERON:0000025!1.09e-10!114;UBERON:0002619!4.04e-10!17;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0003076!1.83e-07!12;UBERON:0003057!1.83e-07!12;UBERON:0000153!3.64e-07!94;UBERON:0007811!8.50e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-29,73;UBERON:0001016,8.99e-29,75;UBERON:0000073,1.03e-25,54;UBERON:0001049,2.19e-24,52;UBERON:0005068,2.19e-24,52;UBERON:0006241,2.19e-24,52;UBERON:0007135,2.19e-24,52;UBERON:0002020,5.09e-23,34;UBERON:0004121,1.32e-22,95;UBERON:0000924,1.32e-22,95;UBERON:0006601,1.32e-22,95;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0000955,1.68e-20,47;UBERON:0006238,1.68e-20,47;UBERON:0002616,8.01e-20,46;UBERON:0003528,5.53e-19,29;UBERON:0002791,5.53e-19,29;UBERON:0001893,5.53e-19,29;UBERON:0010371,1.52e-17,73;UBERON:0003080,1.38e-16,40;UBERON:0002780,4.64e-16,39;UBERON:0001890,4.64e-16,39;UBERON:0006240,4.64e-16,39;UBERON:0010314,2.49e-14,92;UBERON:0003056,3.23e-14,49;UBERON:0000956,5.26e-14,21;UBERON:0001869,5.26e-14,21;UBERON:0000203,5.26e-14,21;UBERON:0002619,1.05e-11,17;UBERON:0004111,3.03e-10,122;UBERON:0000025,5.18e-10,114;UBERON:0002021,8.30e-09,10;UBERON:0000411,8.30e-09,10;UBERON:0001950,8.30e-09,10;UBERON:0003076,1.46e-08,12;UBERON:0003057,1.46e-08,12 | |||
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| |||
|short_description=p2@Chadl | |||
}} |
Latest revision as of 04:17, 27 September 2015
Short description: | p2@Chadl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chadl_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000173898_5end |
EntrezGene: | Chadl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-15 | 23 |
neural cell | 2.53e-15 | 43 |
ectodermal cell | 2.80e-15 | 44 |
neurectodermal cell | 2.80e-15 | 44 |
electrically responsive cell | 3.37e-15 | 39 |
electrically active cell | 3.37e-15 | 39 |
neuron | 7.26e-13 | 33 |
neuronal stem cell | 7.26e-13 | 33 |
neuroblast | 7.26e-13 | 33 |
electrically signaling cell | 7.26e-13 | 33 |
embryonic cell | 6.32e-10 | 70 |