FFCP PHASE1:Mm9::chr15:79664718..79664744,-: Difference between revisions
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{{FFCP|EntrezGene=494448|HGNC=|MCL_coexpression_id=2|UniProt=D3Z329|association_with_transcript=-8bp_to_ENSMUST00000148358_5end|description=CAGE_peak_3_at_Cbx6_5end|id=chr15:79664718..79664744,-|ontology_enrichment_celltype=CL:0000055!7.60e-08!50;CL:0002319!4.54e-07!43;CL:0000393!7.17e-07!39;CL:0000211!7.17e-07!39;CL:0000221!8.22e-07!44;CL:0000133!8.22e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,3.50e-07,43;CL:0000393,5.52e-07,39;CL:0000211,5.52e-07,39;CL:0000221,6.39e-07,44;CL:0000133,6.39e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.81e-23!73;UBERON:0005743!1.81e-23!73;UBERON:0000073!1.80e-22!75;UBERON:0001016!1.80e-22!75;UBERON:0001049!3.01e-20!52;UBERON:0005068!3.01e-20!52;UBERON:0006241!3.01e-20!52;UBERON:0007135!3.01e-20!52;UBERON:0000955!1.01e-19!50;UBERON:0006238!1.01e-19!50;UBERON:0002616!3.76e-19!49;UBERON:0002346!4.64e-17!71;UBERON:0003075!4.64e-17!71;UBERON:0007284!4.64e-17!71;UBERON:0004121!6.50e-16!102;UBERON:0000924!6.50e-16!102;UBERON:0006601!6.50e-16!102;UBERON:0000033!9.48e-16!63;UBERON:0003080!4.17e-14!40;UBERON:0002780!1.51e-13!39;UBERON:0001890!1.51e-13!39;UBERON:0006240!1.51e-13!39;UBERON:0002020!1.49e-12!34;UBERON:0003056!4.52e-12!49;UBERON:0007811!3.46e-11!86;UBERON:0000153!5.95e-11!94;UBERON:0002791!2.12e-10!29;UBERON:0003528!2.12e-10!29;UBERON:0001893!2.12e-10!29;UBERON:0000025!9.11e-10!114;UBERON:0004111!5.74e-09!122;UBERON:0002021!3.85e-08!10;UBERON:0000411!3.85e-08!10;UBERON:0001950!3.85e-08!10;UBERON:0002619!3.35e-07!17;UBERON:0003076!5.24e-07!12;UBERON:0003057!5.24e-07!12;UBERON:0000956!6.45e-07!21;UBERON:0001869!6.45e-07!21;UBERON:0000203!6.45e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.58e-24,73;UBERON:0001016,9.80e-23,75;UBERON:0000073,7.84e-22,54;UBERON:0001049,1.66e-20,52;UBERON:0005068,1.66e-20,52;UBERON:0006241,1.66e-20,52;UBERON:0007135,1.66e-20,52;UBERON:0000955,4.33e-18,47;UBERON:0006238,4.33e-18,47;UBERON:0002346,5.92e-18,64;UBERON:0003075,5.92e-18,64;UBERON:0007284,5.92e-18,64;UBERON:0002616,1.58e-17,46;UBERON:0004121,4.78e-16,95;UBERON:0000924,4.78e-16,95;UBERON:0006601,4.78e-16,95;UBERON:0010314,1.08e-14,92;UBERON:0010371,1.39e-14,73;UBERON:0003080,2.61e-14,40;UBERON:0002780,9.55e-14,39;UBERON:0001890,9.55e-14,39;UBERON:0006240,9.55e-14,39;UBERON:0002020,9.55e-13,34;UBERON:0003056,3.05e-12,49;UBERON:0003528,1.42e-10,29;UBERON:0002791,1.42e-10,29;UBERON:0001893,1.42e-10,29;UBERON:0000025,4.37e-10,114;UBERON:0004111,3.29e-09,122;UBERON:0002021,3.44e-08,10;UBERON:0000411,3.44e-08,10;UBERON:0001950,3.44e-08,10;UBERON:0002619,2.35e-07,17;UBERON:0000956,4.68e-07,21;UBERON:0001869,4.68e-07,21;UBERON:0000203,4.68e-07,21;UBERON:0003076,4.78e-07,12;UBERON:0003057,4.78e-07,12|phase1_expression=3.68342348341026,0.348975407639361,0,0,0,0,0.233612640595526,0.516493293766305,0.84473233291,0.468129052643987,0.68487187290202,0.319088635981346,0.342401459862411,0.262261207256992,0.999329285446988,0.202475267389826,0.699561878128147,1.10411757875383,0.822686601634433,0,8.84450217571126,1.48936426801328,1.30599894569468,0,0,0,0,0,0.190023419456374,0.252030129759931,0,1.90509202037889,1.84519436275371,0,0.577703239502549,1.32987716286794,1.42918549383658,0,0,0,0,0,0,14.1004436132647,13.1790010585369,22.0256102594018,11.7358701652206,6.75877984779384,10.9843091367236,11.8602238435313,8.53917171914711,1.43752564364972,1.00669563634642,2.17608642603403,1.34437519656986,3.08711323243136,5.44413535883638,3.09403255366465,4.85559506063035,6.87688273053643,5.07065122804943,5.76035704517525,5.33576877666684,2.2497492932035,0,2.1314403448383,9.58720353658895,11.5265491596466,2.48855069540346,1.89008313664367,3.78584930432488,18.2816630018434,15.2399293256613,2.44981598429908,2.20444583341944,0,26.4278114398533,22.3452841649078,17.664751324468,5.53922408466814,7.41049913179518,8.33461392890816,24.0097379141188,14.069065250792,18.3357897332172,8.54422897873636,9.96601765593721,4.65998614563251,1.21161909333094,2.41828992341714,2.89864488701678,0,0,0,0,0,2.52799956237153,5.62420064507591,3.11743205523443,4.24007489412408,1.97180787687353,7.69958864485907,7.64415719119937,0,3.46385665617943,2.78695852022608,4.54972000513305,1.7127581957859,1.03575153458869,2.22663208597237,4.3371331691534,3.95805121805784,2.53677046981664,4.06951129492081,2.23418543557839,2.51333182659351,0.988779870937496,1.59059292611903,0.884610551949874,3.07357014900077,1.98757366614354,0.969750506270444,1.86391761218122,14.3462590535658,20.7352239745321,1.02182822083437,0.239630249011841,0,0.127070227073065,17.9748767285787,26.5350349634803,5.6544458450789,41.1963638855695,56.513116070003,20.3632283668369,31.3125637720772,7.84163101647435,3.23458123586242,2.77995034277042,1.89397670297827,2.08192708740326,2.5289231487682,3.60124259610698,2.41127708537144,2.85753296435577,2.0498195245576,2.24884138943349,6.46758426847539,1.29340795759705,1.51284864134255,2.99116911078713,3.5071317188412,5.56094498451196,4.87553033131033,5.3503355466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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=494448 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z329 | |||
|association_with_transcript=-8bp_to_ENSMUST00000148358_5end | |||
|cluster_id=chr15:79664718..79664744,- | |||
|description=CAGE_peak_3_at_Cbx6_5end | |||
|id=chr15:79664718..79664744,- | |||
|ontology_enrichment_celltype=CL:0000055!7.60e-08!50;CL:0002319!4.54e-07!43;CL:0000393!7.17e-07!39;CL:0000211!7.17e-07!39;CL:0000221!8.22e-07!44;CL:0000133!8.22e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.50e-07,43;CL:0000393,5.52e-07,39;CL:0000211,5.52e-07,39;CL:0000221,6.39e-07,44;CL:0000133,6.39e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.81e-23!73;UBERON:0005743!1.81e-23!73;UBERON:0000073!1.80e-22!75;UBERON:0001016!1.80e-22!75;UBERON:0001049!3.01e-20!52;UBERON:0005068!3.01e-20!52;UBERON:0006241!3.01e-20!52;UBERON:0007135!3.01e-20!52;UBERON:0000955!1.01e-19!50;UBERON:0006238!1.01e-19!50;UBERON:0002616!3.76e-19!49;UBERON:0002346!4.64e-17!71;UBERON:0003075!4.64e-17!71;UBERON:0007284!4.64e-17!71;UBERON:0004121!6.50e-16!102;UBERON:0000924!6.50e-16!102;UBERON:0006601!6.50e-16!102;UBERON:0000033!9.48e-16!63;UBERON:0003080!4.17e-14!40;UBERON:0002780!1.51e-13!39;UBERON:0001890!1.51e-13!39;UBERON:0006240!1.51e-13!39;UBERON:0002020!1.49e-12!34;UBERON:0003056!4.52e-12!49;UBERON:0007811!3.46e-11!86;UBERON:0000153!5.95e-11!94;UBERON:0002791!2.12e-10!29;UBERON:0003528!2.12e-10!29;UBERON:0001893!2.12e-10!29;UBERON:0000025!9.11e-10!114;UBERON:0004111!5.74e-09!122;UBERON:0002021!3.85e-08!10;UBERON:0000411!3.85e-08!10;UBERON:0001950!3.85e-08!10;UBERON:0002619!3.35e-07!17;UBERON:0003076!5.24e-07!12;UBERON:0003057!5.24e-07!12;UBERON:0000956!6.45e-07!21;UBERON:0001869!6.45e-07!21;UBERON:0000203!6.45e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.58e-24,73;UBERON:0001016,9.80e-23,75;UBERON:0000073,7.84e-22,54;UBERON:0001049,1.66e-20,52;UBERON:0005068,1.66e-20,52;UBERON:0006241,1.66e-20,52;UBERON:0007135,1.66e-20,52;UBERON:0000955,4.33e-18,47;UBERON:0006238,4.33e-18,47;UBERON:0002346,5.92e-18,64;UBERON:0003075,5.92e-18,64;UBERON:0007284,5.92e-18,64;UBERON:0002616,1.58e-17,46;UBERON:0004121,4.78e-16,95;UBERON:0000924,4.78e-16,95;UBERON:0006601,4.78e-16,95;UBERON:0010314,1.08e-14,92;UBERON:0010371,1.39e-14,73;UBERON:0003080,2.61e-14,40;UBERON:0002780,9.55e-14,39;UBERON:0001890,9.55e-14,39;UBERON:0006240,9.55e-14,39;UBERON:0002020,9.55e-13,34;UBERON:0003056,3.05e-12,49;UBERON:0003528,1.42e-10,29;UBERON:0002791,1.42e-10,29;UBERON:0001893,1.42e-10,29;UBERON:0000025,4.37e-10,114;UBERON:0004111,3.29e-09,122;UBERON:0002021,3.44e-08,10;UBERON:0000411,3.44e-08,10;UBERON:0001950,3.44e-08,10;UBERON:0002619,2.35e-07,17;UBERON:0000956,4.68e-07,21;UBERON:0001869,4.68e-07,21;UBERON:0000203,4.68e-07,21;UBERON:0003076,4.78e-07,12;UBERON:0003057,4.78e-07,12 | |||
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| |||
|short_description=p3@Cbx6 | |||
}} |
Latest revision as of 03:15, 27 September 2015
Short description: | p3@Cbx6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cbx6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -8bp_to_ENSMUST00000148358_5end |
EntrezGene: | Cbx6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.50e-07 | 43 |
electrically responsive cell | 5.52e-07 | 39 |
electrically active cell | 5.52e-07 | 39 |
ectodermal cell | 6.39e-07 | 44 |
neurectodermal cell | 6.39e-07 | 44 |