FFCP PHASE1:Hg19::chrX:117250740..117250792,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:117250740..117250792,-
|short_description=p1@KLHL13
|description=CAGE_peak_1_at_KLHL13_5end
|association_with_transcript=0bp_to_ENST00000371882,ENST0000043...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90293 | |EntrezGene=90293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22931 | |HGNC=22931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000371882,ENST00000436163,uc004eqm.2,uc011mtq.1_5end | |||
|cluster_id=chrX:117250740..117250792,- | |||
|coexpression_cluster_id=C4847 | |||
|description=CAGE_peak_1_at_KLHL13_5end | |||
|id=chrX:117250740..117250792,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.46e-13!347;UBERON:0000477!1.75e-12!286;UBERON:0007023!1.09e-10!115;UBERON:0000153!3.61e-10!129;UBERON:0007811!3.61e-10!129;UBERON:0000922!5.96e-10!612;UBERON:0000033!6.65e-10!123;UBERON:0000468!3.67e-09!659;UBERON:0000924!5.90e-09!173;UBERON:0006601!5.90e-09!173;UBERON:0002050!1.35e-08!605;UBERON:0005423!1.35e-08!605;UBERON:0000064!1.41e-08!219;UBERON:0004121!1.74e-08!169;UBERON:0004111!1.75e-08!241;UBERON:0000923!2.81e-08!604;UBERON:0005291!2.81e-08!604;UBERON:0006598!2.81e-08!604;UBERON:0002532!2.81e-08!604;UBERON:0002346!5.50e-08!90;UBERON:0003075!1.68e-07!86;UBERON:0007284!1.68e-07!86;UBERON:0001444!2.51e-07!48;UBERON:0001737!2.60e-07!9;UBERON:0000119!2.95e-07!312;UBERON:0000483!3.06e-07!309;UBERON:0000161!4.14e-07!35;UBERON:0003103!5.02e-07!69;UBERON:0000467!6.34e-07!625;UBERON:0000480!7.56e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-07;9!UBERON:0001557;1.11e-07;9!UBERON:0000165;6.12e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.62e-11,223;UBERON:0007023,1.78e-10,114;UBERON:0004121,5.46e-10,171;UBERON:0000924,5.46e-10,171;UBERON:0006601,5.46e-10,171;UBERON:0000922,1.78e-09,592;UBERON:0005423,1.03e-08,581;UBERON:0002346,1.57e-08,86;UBERON:0010314,2.38e-08,132;UBERON:0004111,2.95e-08,240;UBERON:0001007,4.93e-08,145;UBERON:0001555,4.93e-08,145;UBERON:0007026,4.93e-08,145;UBERON:0003075,6.38e-08,82;UBERON:0007284,6.38e-08,82;UBERON:0000153,1.18e-07,62;UBERON:0007811,1.18e-07,62;UBERON:0001737,1.19e-07,9;UBERON:0000161,1.58e-07,36;UBERON:0003103,1.67e-07,68;UBERON:0000033,1.75e-07,56;UBERON:0001444,1.83e-07,49;UBERON:0000119,2.07e-07,309;UBERON:0000483,2.15e-07,306;UBERON:0000165,4.40e-07,29;UBERON:0000930,4.40e-07,29;UBERON:0010371,4.86e-07,104 | |||
|phase1_expression=1.63510541343501,0.642301571672949,1.12763523276777,1.0007329835313,1.78784437770915,5.23403114460221,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,9.2824764720035,2.98257638155124,0,0,0,0,1.96993692922861,2.24400760368678,0.940364164434263,7.72837165253853,10.9499540058307,6.65375989852455,5.04328477936478,4.43343183029707,5.35233312933019,1.18009283054671,0.383829398097213,2.32224184974114,0.919421224478927,2.71085326900425,0.739508020333575,0,0,8.51441274071057,0,0,0,2.91090116511902,4.21061765824673,1.54545340580512,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,3.63239701580021,0,0,0,0,0,0.673971786878971,0,0.16072558669708,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,11.8954195721123,3.92355994087075,6.58460211937693,0.590129310341499,0.393010762749165,0,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0.822189523018381,1.10540007114339,1.44901542867526,1.77943875794473,1.60524496853828,3.1360657141493,0,0.383220493601921,0,0,0,0.651083453856419,1.90090408889675,0.903450714466637,0.383959833463255,0,0,0.821127996921047,0,0.267440195783507,1.15859523106239,0,4.69490601792545,1.40648818027883,20.6020316859203,14.5387994084408,26.3620664508699,5.5670016293577,12.1658717575659,6.23929793282848,6.20842312895179,4.65524364173568,10.2818574265704,0,1.85392221392215,0,0,0.132957960518865,7.87019060207628,9.15191857248205,5.20040501861391,5.36658499890104,4.30117297553062,7.63709103536707,16.3939303157963,5.87299210693868,6.60283300656162,6.26984899610432,2.06733407335463,4.62496141492723,1.67360306382335,0.402829317109147,0.760272105718513,0.24406205754817,1.10298924103761,8.1014194788176,10.8052671223737,9.20570427767296,7.65758067286591,6.13266549863533,9.49265659568129,6.59526278149466,0,0,2.18047026071267,2.98183171017191,4.05217637326655,0.926864265692532,1.14734648299525,1.06400514659507,3.92474320099615,3.20246987189115,0.24666754841716,4.04574346019696,2.69421344139376,4.25000948094993,0.302714855289863,0.576175924479999,0.468642863667593,1.5608003841516,0.570471821544449,1.49448680551801,1.17434498643765,1.13311061057692,2.52811452064047,10.6160169052544,9.08973948107083,13.0190484281464,5.94001428641027,2.96720315134268,0,0,9.42682238142771,11.5109038282207,6.64953877162039,12.7303510055443,1.5324389789951,7.21142682751665,4.65071950956086,1.07633781413317,0.640672166455702,0.423863802319124,0,0,0,0.744467425326359,0.506328996723799,0.292311015483596,0.252433774244115,0.184099797284599,9.21382523867228,0,0.503760491138201,6.27374191548804,4.25173876959253,2.72746120590835,5.16248271700207,5.3668430697022,5.83130980614535,3.83440011469411,3.21349270547648,4.54177531576131,9.85438869504741,0,1.92972281457866,0,0.928735856063958,1.44375896333917,28.3936320095625,35.0656155362452,29.4033456457848,26.029377564845,29.6316043965672,25.6252268639984,22.6516597709076,27.4710051175485,22.700082259837,0,1.40241773803446,2.057870056657,0,2.53510069643662,1.96565443335525,1.77236972004421,0,4.5505722260952,3.08822058537346,4.49976170175365,1.1240175325762,1.50793458617446,10.3699058577553,0.977424915930974,2.07986957055916,2.88662684050547,7.41954591840492,2.23076519048061,2.45422961193825,1.85194205030644,3.42457474022277,3.95102198979638,0.858486162094873,4.18568910348575,0,0.297262324577456,3.74935335947108,2.68771405118175,4.67857820899875,3.67189943081678,4.06887513919547,7.28427090413901,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,3.81988425558278,2.34434894420094,5.13217338068116,0.925447434329912,2.40274446275134,4.28739648945867,1.00917975910825,3.05172048183296,1.98013371716565,0.129271715757778,0,4.22651376278,0.797814349754612,0,3.85811061393213,1.41849132023278,1.3321108950805,4.71827379071887,0,0,1.30294473717494,1.06617584622764,0,0.904318131178758,2.61460037580088,0.99972991182057,2.43247561282381,3.01354254859276,0,1.4377491329495,3.44585807502342,2.85273810081437,2.60606352001643,2.67119219315498,1.79060963239896,0,0.197030760201927,0,0.256686072559497,14.229298956458,5.20559415430487,3.09315525111078,3.35032530668698,0,0,0,0,14.2322130394202,3.00102312635806,1.62759014219841,0.623912584592421,1.78428988797162,0.788512075169673,1.7571212248907,2.10662269809403,2.27407504055985,3.10419213877515,8.63493278096067,2.76553752812555,1.21637060255316,0,0,0.82707210449155,0.647142602455851,0.533637789017222,0,0,1.20956117331872,5.95458738765064,3.37616341233737,0.561320188866147,1.66580894032411,2.04682899626681,2.73451665944133,5.93672265779964,1.3878872442239,0.710246901252508,0.821271560138091,0.519254429183621,0.581051892299796,2.90062679019893,2.6065841139427,1.28913384510255,10.6777436793084,8.5582848963157,7.21184282276833,5.41439535488894,31.191211527288,13.3339460760065,4.38417673959782,40.6373771237571,0,0.340187410553031,6.69339339916632,1.54227252690289,4.06419656315779,4.51520796469368,26.762008669729,11.6350641250021,11.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| ||
|short_description=p1@KLHL13 | |||
}} | }} |
Latest revision as of 03:48, 19 September 2015
Short description: | p1@KLHL13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL13_5end |
Coexpression cluster: | C4847_neuroblastoma_gastrointestinal_cervical_Chondrocyte_uterus_Renal_kidney |
Association with transcript: | 0bp_to_ENST00000371882, ENST00000436163, uc004eqm.2, uc011mtq.1_5end |
EntrezGene: | KLHL13 |
HGNC: | 22931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.62e-11 | 223 |
adult organism | 1.78e-10 | 114 |
ectoderm-derived structure | 5.46e-10 | 171 |
ectoderm | 5.46e-10 | 171 |
presumptive ectoderm | 5.46e-10 | 171 |
embryo | 1.78e-09 | 592 |
developing anatomical structure | 1.03e-08 | 581 |
neurectoderm | 1.57e-08 | 86 |
structure with developmental contribution from neural crest | 2.38e-08 | 132 |
anatomical conduit | 2.95e-08 | 240 |
digestive system | 4.93e-08 | 145 |
digestive tract | 4.93e-08 | 145 |
primitive gut | 4.93e-08 | 145 |
neural plate | 6.38e-08 | 82 |
presumptive neural plate | 6.38e-08 | 82 |
anterior region of body | 1.18e-07 | 62 |
craniocervical region | 1.18e-07 | 62 |
larynx | 1.19e-07 | 9 |
orifice | 1.58e-07 | 36 |
compound organ | 1.67e-07 | 68 |
head | 1.75e-07 | 56 |
subdivision of head | 1.83e-07 | 49 |
cell layer | 2.07e-07 | 309 |
epithelium | 2.15e-07 | 306 |
mouth | 4.40e-07 | 29 |
stomodeum | 4.40e-07 | 29 |
ecto-epithelium | 4.86e-07 | 104 |