FFCP PHASE1:Mm9::chr15:44288969..44288980,+: Difference between revisions
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{{FFCP|EntrezGene=192190|HGNC=|MCL_coexpression_id=15|UniProt=F8WH29,E9PUU8,Q80ZA4|association_with_transcript=-118bp_to_ENSMUST00000038336,ENSMUST00000166957,NM_138674,uc007vpx.1,uc007vpy.1_5end|description=CAGE_peak_3_at_Pkhd1l1_5end|id=chr15:44288969..44288980,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!8.24e-13!47;UBERON:0004872!9.62e-13!33;UBERON:0000926!4.18e-11!193;UBERON:0004120!4.18e-11!193;UBERON:0006603!4.18e-11!193;UBERON:0001048!8.26e-10!147;UBERON:0004535!2.09e-09!23;UBERON:0001009!2.09e-09!23;UBERON:0007100!6.27e-09!18;UBERON:0000948!6.27e-09!18;UBERON:0005498!6.27e-09!18;UBERON:0004140!6.27e-09!18;UBERON:0009881!6.27e-09!18;UBERON:0004141!6.27e-09!18;UBERON:0003084!6.27e-09!18;UBERON:0007005!6.27e-09!18;UBERON:0004139!6.27e-09!18;UBERON:0004291!6.27e-09!18;UBERON:0000466!1.23e-07!79;UBERON:0003104!3.45e-07!131;UBERON:0009142!3.45e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.36e-14,47;UBERON:0004872,7.54e-12,33;UBERON:0002106,2.46e-09,6;UBERON:0004457,2.46e-09,6;UBERON:0000042,2.46e-09,6;UBERON:0004854,2.46e-09,6;UBERON:0009034,2.46e-09,6;UBERON:0002095,2.46e-09,6;UBERON:0004782,2.46e-09,6;UBERON:0003281,2.46e-09,6;UBERON:0009664,2.46e-09,6;UBERON:0002296,2.46e-09,6;UBERON:0005602,2.46e-09,6;UBERON:0001179,2.46e-09,6;UBERON:0006293,2.46e-09,6;UBERON:0000075,2.44e-08,6;UBERON:0005856,2.44e-08,6;UBERON:0005866,2.44e-08,6;UBERON:0005863,2.44e-08,6;UBERON:0001048,5.44e-08,134;UBERON:0002107,8.81e-08,22;UBERON:0007499,8.81e-08,22;UBERON:0006925,8.81e-08,22;UBERON:0009497,8.81e-08,22;UBERON:0000015,8.81e-08,22;UBERON:0002423,8.81e-08,22;UBERON:0006235,8.81e-08,22;UBERON:0008835,8.81e-08,22;UBERON:0003894,8.81e-08,22;UBERON:0004161,8.81e-08,22;UBERON:0008836,8.81e-08,22;UBERON:0005172,1.60e-07,49;UBERON:0005173,1.60e-07,49;UBERON:0002417,1.60e-07,49;UBERON:0000916,1.60e-07,49;UBERON:0003887,1.69e-07,10;UBERON:0009854,2.38e-07,23;UBERON:0009856,2.38e-07,23;UBERON:0007100,7.76e-07,18;UBERON:0000948,7.76e-07,18;UBERON:0005498,7.76e-07,18;UBERON:0004140,7.76e-07,18;UBERON:0009881,7.76e-07,18;UBERON:0004141,7.76e-07,18;UBERON:0003084,7.76e-07,18;UBERON:0007005,7.76e-07,18;UBERON:0004139,7.76e-07,18;UBERON:0004291,7.76e-07,18|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99597571268193,8.50396123037269,8.39474253753776,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0,0,0,0,0.485510353031154,0.629484089877886,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,2.4581890676385,4.42305275974937,0.647067399789637,3.3126227769059,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,3.6078021476927,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0,0,0,0,0,0.398068533636986,0,0,0,1.65700618028402,1.87620847984877,1.62055855314913,1.42046841351126,0.787056926989615,0.771335564436891,0.697601834251224,1.60964040839772,1.28441876603886,0.822799249567402,1.14917224855367,1.29710095273369,0.877199924551994,2.63460138349261,0.671032093801859,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,7.00749444007595,6.09332884850929,6.07127703439105,9.94014594803664,9.40590923034426,3.8193877767213,4.89083433666378,0.972811360650212,3.0201755450689,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.637819074629948,0.655453258862952,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.35613120733451,0.651547837414304,1.31976098378028,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,0,0.307435147943927,1.03371317267288,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0,0.582961673259701,0,5.46786818553129,0.412773735926445,2.40752885580625,10.360265135258,15.8565304156389,6.86334519619568,0,0,0,0,0.316335993581135,0,0,0,0,0.404593039154462,0.495920734352016,1.04702376793612,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.821687657318618,0.129920822977795,0.537080087002444,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,3.40349403895612,0.628839487883947,0,0.222246727801615,0.824140228955577,0.962757628775446,0.505394423527595,0,0.377252682772152,0.842773567228942,0.768301828858431,0.861532034334199,0.476293691283074,0.811190281613988,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.953744759789284,0.726732083161643,0.846984423737976,0.507687647350059,1.09756783723664,0.263069711437843,0.407412341537585,0,0.355905054372522,0.985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0,0.467863216890817,0.429742108096597,0,1.10295709559758,1.39120701372253|short_description=p3@Pkhd1l1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192190 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=F8WH29,E9PUU8,Q80ZA4 | |||
|association_with_transcript=-118bp_to_ENSMUST00000038336,ENSMUST00000166957,NM_138674,uc007vpx.1,uc007vpy.1_5end | |||
|cluster_id=chr15:44288969..44288980,+ | |||
|description=CAGE_peak_3_at_Pkhd1l1_5end | |||
|id=chr15:44288969..44288980,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.24e-13!47;UBERON:0004872!9.62e-13!33;UBERON:0000926!4.18e-11!193;UBERON:0004120!4.18e-11!193;UBERON:0006603!4.18e-11!193;UBERON:0001048!8.26e-10!147;UBERON:0004535!2.09e-09!23;UBERON:0001009!2.09e-09!23;UBERON:0007100!6.27e-09!18;UBERON:0000948!6.27e-09!18;UBERON:0005498!6.27e-09!18;UBERON:0004140!6.27e-09!18;UBERON:0009881!6.27e-09!18;UBERON:0004141!6.27e-09!18;UBERON:0003084!6.27e-09!18;UBERON:0007005!6.27e-09!18;UBERON:0004139!6.27e-09!18;UBERON:0004291!6.27e-09!18;UBERON:0000466!1.23e-07!79;UBERON:0003104!3.45e-07!131;UBERON:0009142!3.45e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.36e-14,47;UBERON:0004872,7.54e-12,33;UBERON:0002106,2.46e-09,6;UBERON:0004457,2.46e-09,6;UBERON:0000042,2.46e-09,6;UBERON:0004854,2.46e-09,6;UBERON:0009034,2.46e-09,6;UBERON:0002095,2.46e-09,6;UBERON:0004782,2.46e-09,6;UBERON:0003281,2.46e-09,6;UBERON:0009664,2.46e-09,6;UBERON:0002296,2.46e-09,6;UBERON:0005602,2.46e-09,6;UBERON:0001179,2.46e-09,6;UBERON:0006293,2.46e-09,6;UBERON:0000075,2.44e-08,6;UBERON:0005856,2.44e-08,6;UBERON:0005866,2.44e-08,6;UBERON:0005863,2.44e-08,6;UBERON:0001048,5.44e-08,134;UBERON:0002107,8.81e-08,22;UBERON:0007499,8.81e-08,22;UBERON:0006925,8.81e-08,22;UBERON:0009497,8.81e-08,22;UBERON:0000015,8.81e-08,22;UBERON:0002423,8.81e-08,22;UBERON:0006235,8.81e-08,22;UBERON:0008835,8.81e-08,22;UBERON:0003894,8.81e-08,22;UBERON:0004161,8.81e-08,22;UBERON:0008836,8.81e-08,22;UBERON:0005172,1.60e-07,49;UBERON:0005173,1.60e-07,49;UBERON:0002417,1.60e-07,49;UBERON:0000916,1.60e-07,49;UBERON:0003887,1.69e-07,10;UBERON:0009854,2.38e-07,23;UBERON:0009856,2.38e-07,23;UBERON:0007100,7.76e-07,18;UBERON:0000948,7.76e-07,18;UBERON:0005498,7.76e-07,18;UBERON:0004140,7.76e-07,18;UBERON:0009881,7.76e-07,18;UBERON:0004141,7.76e-07,18;UBERON:0003084,7.76e-07,18;UBERON:0007005,7.76e-07,18;UBERON:0004139,7.76e-07,18;UBERON:0004291,7.76e-07,18 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99597571268193,8.50396123037269,8.39474253753776,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0,0,0,0,0.485510353031154,0.629484089877886,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,2.4581890676385,4.42305275974937,0.647067399789637,3.3126227769059,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,3.6078021476927,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.431135985865684,0,0,0,0,0,0,0.398068533636986,0,0,0,1.65700618028402,1.87620847984877,1.62055855314913,1.42046841351126,0.787056926989615,0.771335564436891,0.697601834251224,1.60964040839772,1.28441876603886,0.822799249567402,1.14917224855367,1.29710095273369,0.877199924551994,2.63460138349261,0.671032093801859,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,7.00749444007595,6.09332884850929,6.07127703439105,9.94014594803664,9.40590923034426,3.8193877767213,4.89083433666378,0.972811360650212,3.0201755450689,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.637819074629948,0.655453258862952,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.35613120733451,0.651547837414304,1.31976098378028,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,0,0.307435147943927,1.03371317267288,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0,0.582961673259701,0,5.46786818553129,0.412773735926445,2.40752885580625,10.360265135258,15.8565304156389,6.86334519619568,0,0,0,0,0.316335993581135,0,0,0,0,0.404593039154462,0.495920734352016,1.04702376793612,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.821687657318618,0.129920822977795,0.537080087002444,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,3.40349403895612,0.628839487883947,0,0.222246727801615,0.824140228955577,0.962757628775446,0.505394423527595,0,0.377252682772152,0.842773567228942,0.768301828858431,0.861532034334199,0.476293691283074,0.811190281613988,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.953744759789284,0.726732083161643,0.846984423737976,0.507687647350059,1.09756783723664,0.263069711437843,0.407412341537585,0,0.355905054372522,0.985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0,0.467863216890817,0.429742108096597,0,1.10295709559758,1.39120701372253 | |||
|short_description=p3@Pkhd1l1 | |||
}} |
Latest revision as of 19:19, 26 September 2015
Short description: | p3@Pkhd1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pkhd1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -118bp_to_ENSMUST00000038336, ENSMUST00000166957, NM_138674, uc007vpx.1, uc007vpy.1_5end |
EntrezGene: | Pkhd1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.51e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.51e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.51e-07 | 3 |