FFCP PHASE1:Hg19::chr4:2243725..2243736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28719 | |||
|TSSclassifier=strong | |||
|UniProt=B4DF64 | |||
|association_with_transcript=111bp_to_ENST00000506763,uc011bvj.1_5end | |||
|cluster_id=chr4:2243725..2243736,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_5_at_HAUS3_5end | |||
|id=chr4:2243725..2243736,- | |||
|ontology_enrichment_celltype=CL:0000738!2.80e-20!140;CL:0000037!8.77e-19!172;CL:0000566!8.77e-19!172;CL:0002032!5.57e-17!165;CL:0000837!5.57e-17!165;CL:0000988!1.92e-16!182;CL:0002087!1.68e-15!119;CL:0002031!2.76e-15!124;CL:0000791!5.28e-13!18;CL:0000789!5.28e-13!18;CL:0002420!5.28e-13!18;CL:0002419!5.28e-13!18;CL:0000790!5.28e-13!18;CL:0000838!1.97e-11!52;CL:0000542!4.86e-11!53;CL:0000051!4.86e-11!53;CL:0000084!3.47e-09!25;CL:0000827!3.47e-09!25;CL:0000624!6.25e-09!6;CL:0000766!1.71e-08!76;CL:0000763!1.69e-07!112;CL:0000049!1.69e-07!112;CL:0002393!3.42e-07!9;CL:0002397!3.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.20e-32;6!CL:0000791;1.94e-28;18!CL:0000789;1.94e-28;18!CL:0002419;1.94e-28;18!CL:0000084;6.15e-20;25!CL:0000898;7.24e-17;3!CL:0000623;7.24e-17;3!CL:0000226;3.00e-16;3!CL:0000842;3.00e-16;3!CL:0000542;2.17e-13;53!CL:0000815;6.94e-12;2!CL:0000792;6.94e-12;2!CL:0002677;6.94e-12;2!CL:0000094;2.50e-10;8!CL:0002393;4.14e-08;6!CL:0002397;4.14e-08;6!CL:0000625;4.54e-08;11!CL:0000767;1.02e-07;3!CL:0000081;1.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.09e-32,6;CL:0000791,1.89e-28,18;CL:0000789,1.89e-28,18;CL:0002420,1.89e-28,18;CL:0002419,1.89e-28,18;CL:0000790,1.89e-28,18;CL:0000838,1.19e-22,52;CL:0000542,3.73e-22,53;CL:0000051,3.73e-22,53;CL:0000738,3.93e-20,136;CL:0000084,6.03e-20,25;CL:0000827,6.03e-20,25;CL:0002087,5.20e-17,115;CL:0000898,6.51e-17,3;CL:0000623,6.87e-17,3;CL:0000825,6.87e-17,3;CL:0000037,1.07e-16,168;CL:0000226,3.00e-16,3;CL:0000842,3.00e-16,3;CL:0000988,1.48e-15,177;CL:0002032,2.84e-13,161;CL:0000837,2.84e-13,161;CL:0000815,6.07e-12,2;CL:0000792,6.07e-12,2;CL:0002677,6.07e-12,2;CL:0002031,1.83e-11,120;CL:0000094,2.32e-10,8;CL:0000625,4.54e-08,11;CL:0000767,9.72e-08,3;CL:0000081,1.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-28;18!CL:0000051;2.17e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.20e-10!102;UBERON:0003061!9.20e-10!102;UBERON:0002193!2.99e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0.786728553697808,4.60595277716655,1.54816123316076,0,0,0,0.232401601740905,0.142169232487422,0,2.76997704265939,1.20326668482085,2.60413044859022,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0.822335776043652,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,1.1384259382189,1.17447437874188,2.29363936875137,0,1.68152568894461,0,9.24535919535015,7.07419372948497,10.485676448975,0.334372990781356,5.86660079940463,5.20792586308207,1.94826728407911,0.668462741311041,8.54357131677028,8.63982188876122,5.1452734115353,0.25618263945135,0.520237390239513,0,0,0.869409257205157,1.77943875794473,1.87278579662799,1.04535523804977,0.453237370790265,5.3650869104269,4.12352934579156,6.32549230048757,0.95569624297229,0,0,0.150575119077773,0.127986611154418,2.49861453104692,0.236777252044017,0,12.9028315663829,9.62784704820626,7.82051780967114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,3.87780264148325,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,8.27529192848094,5.60631694634745,5.39040752374943,0.254094624222463,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,3.51505644408909,3.01999881146064,4.802740101155,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.156679895773023,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.899895566206002,0,0.182248669974074,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@HAUS3 | |||
}} |
Latest revision as of 08:36, 17 September 2015
Short description: | p5@HAUS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HAUS3_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 111bp_to_ENST00000506763, uc011bvj.1_5end |
EntrezGene: | HAUS3 |
HGNC: | 28719 |
UniProt: | B4DF64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.09e-32 | 6 |
mature alpha-beta T cell | 1.89e-28 | 18 |
alpha-beta T cell | 1.89e-28 | 18 |
immature T cell | 1.89e-28 | 18 |
mature T cell | 1.89e-28 | 18 |
immature alpha-beta T cell | 1.89e-28 | 18 |
lymphoid lineage restricted progenitor cell | 1.19e-22 | 52 |
lymphocyte | 3.73e-22 | 53 |
common lymphoid progenitor | 3.73e-22 | 53 |
leukocyte | 3.93e-20 | 136 |
T cell | 6.03e-20 | 25 |
pro-T cell | 6.03e-20 | 25 |
nongranular leukocyte | 5.20e-17 | 115 |
naive T cell | 6.51e-17 | 3 |
natural killer cell | 6.87e-17 | 3 |
pro-NK cell | 6.87e-17 | 3 |
hematopoietic stem cell | 1.07e-16 | 168 |
single nucleate cell | 3.00e-16 | 3 |
mononuclear cell | 3.00e-16 | 3 |
hematopoietic cell | 1.48e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.84e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.84e-13 | 161 |
regulatory T cell | 6.07e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.07e-12 | 2 |
naive regulatory T cell | 6.07e-12 | 2 |
hematopoietic lineage restricted progenitor cell | 1.83e-11 | 120 |
granulocyte | 2.32e-10 | 8 |
CD8-positive, alpha-beta T cell | 4.54e-08 | 11 |
basophil | 9.72e-08 | 3 |
blood cell | 1.47e-07 | 11 |