FFCP PHASE1:Mm9::chr15:41278905..41278915,+: Difference between revisions
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{{FFCP|EntrezGene=170719|HGNC=|MCL_coexpression_id=1|UniProt=Q4KMM3|association_with_transcript=-112bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end|description=CAGE_peak_15_at_Oxr1_5end|id=chr15:41278905..41278915,+|ontology_enrichment_celltype=CL:0000540!9.51e-09!33;CL:0000047!9.51e-09!33;CL:0000031!9.51e-09!33;CL:0000404!9.51e-09!33;CL:0000107!1.12e-07!9;CL:0000221!2.40e-07!44;CL:0000133!2.40e-07!44;CL:0002319!6.15e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,5.60e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.88e-20!75;UBERON:0001016!2.88e-20!75;UBERON:0004121!4.60e-20!102;UBERON:0000924!4.60e-20!102;UBERON:0006601!4.60e-20!102;UBERON:0001017!2.83e-19!73;UBERON:0005743!2.83e-19!73;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0000033!2.34e-15!63;UBERON:0001049!8.12e-15!52;UBERON:0005068!8.12e-15!52;UBERON:0006241!8.12e-15!52;UBERON:0007135!8.12e-15!52;UBERON:0002020!1.08e-14!34;UBERON:0000955!6.48e-14!50;UBERON:0006238!6.48e-14!50;UBERON:0002616!4.20e-13!49;UBERON:0002791!7.45e-13!29;UBERON:0003528!7.45e-13!29;UBERON:0001893!7.45e-13!29;UBERON:0003056!1.29e-12!49;UBERON:0002021!7.26e-11!10;UBERON:0000411!7.26e-11!10;UBERON:0001950!7.26e-11!10;UBERON:0003080!2.48e-10!40;UBERON:0002780!1.15e-09!39;UBERON:0001890!1.15e-09!39;UBERON:0006240!1.15e-09!39;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0007811!6.09e-09!86;UBERON:0000010!1.80e-08!11;UBERON:0002619!2.08e-08!17;UBERON:0000153!3.60e-08!94;UBERON:0002410!1.12e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.64e-32,73;UBERON:0001016,3.93e-31,75;UBERON:0000073,1.60e-29,54;UBERON:0001049,1.85e-28,52;UBERON:0005068,1.85e-28,52;UBERON:0006241,1.85e-28,52;UBERON:0007135,1.85e-28,52;UBERON:0000955,1.99e-27,47;UBERON:0006238,1.99e-27,47;UBERON:0002346,6.11e-26,64;UBERON:0003075,6.11e-26,64;UBERON:0007284,6.11e-26,64;UBERON:0002021,1.20e-25,10;UBERON:0000411,1.20e-25,10;UBERON:0001950,1.20e-25,10;UBERON:0002616,1.89e-25,46;UBERON:0004121,7.18e-25,95;UBERON:0000924,7.18e-25,95;UBERON:0006601,7.18e-25,95;UBERON:0010371,5.49e-22,73;UBERON:0002020,5.49e-21,34;UBERON:0003528,4.15e-20,29;UBERON:0002791,4.15e-20,29;UBERON:0001893,4.15e-20,29;UBERON:0003080,9.13e-20,40;UBERON:0002780,3.61e-18,39;UBERON:0001890,3.61e-18,39;UBERON:0006240,3.61e-18,39;UBERON:0002619,2.32e-17,17;UBERON:0003056,4.53e-17,49;UBERON:0000956,1.87e-16,21;UBERON:0001869,1.87e-16,21;UBERON:0000203,1.87e-16,21;UBERON:0010314,3.55e-16,92;UBERON:0002950,4.38e-10,4;UBERON:0001891,4.38e-10,4;UBERON:0009616,4.38e-10,4;UBERON:0010286,4.38e-10,4;UBERON:0000025,8.34e-10,114;UBERON:0003076,3.27e-09,12;UBERON:0003057,3.27e-09,12;UBERON:0004111,8.78e-09,122;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0011216,6.97e-08,194;UBERON:0004733,4.74e-07,6;UBERON:0004732,4.74e-07,6;UBERON:0002028,4.74e-07,6;UBERON:0007277,4.74e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,1.14260393761521,0,0,0.191690942036473,0,0,2.68143409978894,2.15049146558741,0.131886287730194,0.0914876436024097,0,2.79182999001381,1.68828783009504,2.44477196442896,0.294628585473668,1.28134512719193,0.372798891650601,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,2.92780797011547,4.81727425670947,0,0,0,0,2.39665023047716,1.83000241127451,0.251308704225729,8.51739168942155,8.18289463457058,2.90903262383384,3.73154905055843,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0,0,0.204109497453984,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0,0,0,0,5.25724871410318,0.308713837137853,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.72936002979246,2.10981035865966,0,0,0.315508219416257,1.56175497718655,0.861693590931196,0.955875191810208,0.668396022247182,1.41538265394416,0.404810701674894,1.16902343164525,1.18586333383957,7.06906896127976,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.3885110557024,4.14292712856459,1.14579102687879,2.92150409984269,4.7955776383945,6.7985450765073,6.07520250208625,10.3573876741571,7.25027854374727,5.69536342927002,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.760437899670719,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p15@Oxr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170719 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4KMM3 | |||
|association_with_transcript=-112bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end | |||
|cluster_id=chr15:41278905..41278915,+ | |||
|description=CAGE_peak_15_at_Oxr1_5end | |||
|id=chr15:41278905..41278915,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.51e-09!33;CL:0000047!9.51e-09!33;CL:0000031!9.51e-09!33;CL:0000404!9.51e-09!33;CL:0000107!1.12e-07!9;CL:0000221!2.40e-07!44;CL:0000133!2.40e-07!44;CL:0002319!6.15e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.60e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.88e-20!75;UBERON:0001016!2.88e-20!75;UBERON:0004121!4.60e-20!102;UBERON:0000924!4.60e-20!102;UBERON:0006601!4.60e-20!102;UBERON:0001017!2.83e-19!73;UBERON:0005743!2.83e-19!73;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0000033!2.34e-15!63;UBERON:0001049!8.12e-15!52;UBERON:0005068!8.12e-15!52;UBERON:0006241!8.12e-15!52;UBERON:0007135!8.12e-15!52;UBERON:0002020!1.08e-14!34;UBERON:0000955!6.48e-14!50;UBERON:0006238!6.48e-14!50;UBERON:0002616!4.20e-13!49;UBERON:0002791!7.45e-13!29;UBERON:0003528!7.45e-13!29;UBERON:0001893!7.45e-13!29;UBERON:0003056!1.29e-12!49;UBERON:0002021!7.26e-11!10;UBERON:0000411!7.26e-11!10;UBERON:0001950!7.26e-11!10;UBERON:0003080!2.48e-10!40;UBERON:0002780!1.15e-09!39;UBERON:0001890!1.15e-09!39;UBERON:0006240!1.15e-09!39;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0007811!6.09e-09!86;UBERON:0000010!1.80e-08!11;UBERON:0002619!2.08e-08!17;UBERON:0000153!3.60e-08!94;UBERON:0002410!1.12e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.64e-32,73;UBERON:0001016,3.93e-31,75;UBERON:0000073,1.60e-29,54;UBERON:0001049,1.85e-28,52;UBERON:0005068,1.85e-28,52;UBERON:0006241,1.85e-28,52;UBERON:0007135,1.85e-28,52;UBERON:0000955,1.99e-27,47;UBERON:0006238,1.99e-27,47;UBERON:0002346,6.11e-26,64;UBERON:0003075,6.11e-26,64;UBERON:0007284,6.11e-26,64;UBERON:0002021,1.20e-25,10;UBERON:0000411,1.20e-25,10;UBERON:0001950,1.20e-25,10;UBERON:0002616,1.89e-25,46;UBERON:0004121,7.18e-25,95;UBERON:0000924,7.18e-25,95;UBERON:0006601,7.18e-25,95;UBERON:0010371,5.49e-22,73;UBERON:0002020,5.49e-21,34;UBERON:0003528,4.15e-20,29;UBERON:0002791,4.15e-20,29;UBERON:0001893,4.15e-20,29;UBERON:0003080,9.13e-20,40;UBERON:0002780,3.61e-18,39;UBERON:0001890,3.61e-18,39;UBERON:0006240,3.61e-18,39;UBERON:0002619,2.32e-17,17;UBERON:0003056,4.53e-17,49;UBERON:0000956,1.87e-16,21;UBERON:0001869,1.87e-16,21;UBERON:0000203,1.87e-16,21;UBERON:0010314,3.55e-16,92;UBERON:0002950,4.38e-10,4;UBERON:0001891,4.38e-10,4;UBERON:0009616,4.38e-10,4;UBERON:0010286,4.38e-10,4;UBERON:0000025,8.34e-10,114;UBERON:0003076,3.27e-09,12;UBERON:0003057,3.27e-09,12;UBERON:0004111,8.78e-09,122;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0011216,6.97e-08,194;UBERON:0004733,4.74e-07,6;UBERON:0004732,4.74e-07,6;UBERON:0002028,4.74e-07,6;UBERON:0007277,4.74e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,1.14260393761521,0,0,0.191690942036473,0,0,2.68143409978894,2.15049146558741,0.131886287730194,0.0914876436024097,0,2.79182999001381,1.68828783009504,2.44477196442896,0.294628585473668,1.28134512719193,0.372798891650601,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,2.92780797011547,4.81727425670947,0,0,0,0,2.39665023047716,1.83000241127451,0.251308704225729,8.51739168942155,8.18289463457058,2.90903262383384,3.73154905055843,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0,0,0.204109497453984,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0,0,0,0,5.25724871410318,0.308713837137853,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.72936002979246,2.10981035865966,0,0,0.315508219416257,1.56175497718655,0.861693590931196,0.955875191810208,0.668396022247182,1.41538265394416,0.404810701674894,1.16902343164525,1.18586333383957,7.06906896127976,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.3885110557024,4.14292712856459,1.14579102687879,2.92150409984269,4.7955776383945,6.7985450765073,6.07520250208625,10.3573876741571,7.25027854374727,5.69536342927002,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.760437899670719,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p15@Oxr1 | |||
}} |
Latest revision as of 19:01, 26 September 2015
Short description: | p15@Oxr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Oxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -112bp_to_ENSMUST00000090096, ENSMUST00000110297, NM_001130166, uc007vot.2_5end |
EntrezGene: | Oxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.60e-08 | 3 |