FFCP PHASE1:Mm9::chr15:30387606..30387623,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=612|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:30387606..30387623,+|id=chr15:30387606..30387623,+|ontology_enrichment_celltype=CL:0000117!6.39e-19!23;CL:0000337!6.39e-19!23;CL:0002319!5.88e-16!43;CL:0000221!2.32e-15!44;CL:0000133!2.32e-15!44;CL:0000055!2.61e-12!50;CL:0000540!6.71e-11!33;CL:0000047!6.71e-11!33;CL:0000031!6.71e-11!33;CL:0000404!6.71e-11!33;CL:0000393!3.66e-08!39;CL:0000211!3.66e-08!39;CL:0002453!5.50e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-15,43;CL:0000221,7.91e-15,44;CL:0000133,7.91e-15,44;CL:0000117,1.36e-14,23;CL:0000337,1.36e-14,23;CL:0002453,1.27e-10,8;CL:0000540,5.21e-09,33;CL:0000047,5.21e-09,33;CL:0000031,5.21e-09,33;CL:0000404,5.21e-09,33;CL:0000333,3.00e-08,10;CL:0000095,3.00e-08,10;CL:0000243,3.00e-08,10;CL:0000123,3.00e-08,10;CL:0000125,3.00e-08,10;CL:0000030,3.00e-08,10;CL:0000339,3.00e-08,10;CL:0002321,3.24e-07,70;CL:0000128,3.91e-07,6;CL:0000126,3.91e-07,6;CL:0000127,3.91e-07,6;CL:0000393,4.56e-07,39;CL:0000211,4.56e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.37e-40!73;UBERON:0005743!8.37e-40!73;UBERON:0000073!1.87e-39!75;UBERON:0001016!1.87e-39!75;UBERON:0000033!3.77e-39!63;UBERON:0001049!1.15e-37!52;UBERON:0005068!1.15e-37!52;UBERON:0006241!1.15e-37!52;UBERON:0007135!1.15e-37!52;UBERON:0002346!6.15e-36!71;UBERON:0003075!6.15e-36!71;UBERON:0007284!6.15e-36!71;UBERON:0000955!7.71e-36!50;UBERON:0006238!7.71e-36!50;UBERON:0004121!6.03e-35!102;UBERON:0000924!6.03e-35!102;UBERON:0006601!6.03e-35!102;UBERON:0002616!9.65e-35!49;UBERON:0003056!3.48e-34!49;UBERON:0002020!1.71e-31!34;UBERON:0003080!2.29e-27!40;UBERON:0002791!9.14e-27!29;UBERON:0003528!9.14e-27!29;UBERON:0001893!9.14e-27!29;UBERON:0002780!3.22e-26!39;UBERON:0001890!3.22e-26!39;UBERON:0006240!3.22e-26!39;UBERON:0007811!9.48e-24!86;UBERON:0000956!2.57e-20!21;UBERON:0001869!2.57e-20!21;UBERON:0000203!2.57e-20!21;UBERON:0000153!3.28e-20!94;UBERON:0002619!2.14e-17!17;UBERON:0002021!6.68e-12!10;UBERON:0000411!6.68e-12!10;UBERON:0001950!6.68e-12!10;UBERON:0003076!2.58e-10!12;UBERON:0003057!2.58e-10!12;UBERON:0000025!9.07e-09!114;UBERON:0002420!1.58e-07!8;UBERON:0007245!1.58e-07!8;UBERON:0010009!1.58e-07!8;UBERON:0010011!1.58e-07!8;UBERON:0000454!1.58e-07!8;UBERON:0004111!2.51e-07!122;UBERON:0000970!2.68e-07!9;UBERON:0000019!2.68e-07!9;UBERON:0000047!2.68e-07!9;UBERON:0004088!2.68e-07!9;UBERON:0002104!2.68e-07!9;UBERON:0001456!2.68e-07!9;UBERON:0003072!2.68e-07!9;UBERON:0003071!2.68e-07!9;UBERON:0004128!2.68e-07!9;UBERON:0001954!5.59e-07!7;UBERON:0003022!5.59e-07!7;UBERON:0002421!5.59e-07!7;UBERON:0000349!5.59e-07!7;UBERON:0002600!5.59e-07!7;UBERON:0002298!5.65e-07!6;UBERON:0002240!8.32e-07!6;UBERON:0005174!8.32e-07!6;UBERON:0001137!8.32e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-43,73;UBERON:0001016,3.12e-42,75;UBERON:0000073,1.21e-40,54;UBERON:0004121,2.50e-39,95;UBERON:0000924,2.50e-39,95;UBERON:0006601,2.50e-39,95;UBERON:0002346,3.88e-38,64;UBERON:0003075,3.88e-38,64;UBERON:0007284,3.88e-38,64;UBERON:0001049,1.25e-37,52;UBERON:0005068,1.25e-37,52;UBERON:0006241,1.25e-37,52;UBERON:0007135,1.25e-37,52;UBERON:0000955,2.05e-32,47;UBERON:0006238,2.05e-32,47;UBERON:0002020,2.44e-32,34;UBERON:0010371,3.63e-32,73;UBERON:0002616,6.70e-31,46;UBERON:0003528,2.20e-27,29;UBERON:0002791,2.20e-27,29;UBERON:0001893,2.20e-27,29;UBERON:0003056,3.47e-27,49;UBERON:0003080,1.85e-24,40;UBERON:0002619,2.60e-24,17;UBERON:0010314,2.12e-23,92;UBERON:0002780,6.50e-23,39;UBERON:0001890,6.50e-23,39;UBERON:0006240,6.50e-23,39;UBERON:0000956,1.00e-21,21;UBERON:0001869,1.00e-21,21;UBERON:0000203,1.00e-21,21;UBERON:0002021,3.42e-18,10;UBERON:0000411,3.42e-18,10;UBERON:0001950,3.42e-18,10;UBERON:0003076,1.29e-13,12;UBERON:0003057,1.29e-13,12;UBERON:0000025,4.69e-12,114;UBERON:0004111,1.14e-10,122;UBERON:0011216,1.47e-09,194;UBERON:0001954,6.49e-08,7;UBERON:0003022,6.49e-08,7;UBERON:0002421,6.49e-08,7;UBERON:0000349,6.49e-08,7;UBERON:0002600,6.49e-08,7;UBERON:0000483,1.27e-07,174;UBERON:0004733,1.40e-07,6;UBERON:0004732,1.40e-07,6;UBERON:0002028,1.40e-07,6;UBERON:0007277,1.40e-07,6;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0000119,2.01e-07,176;UBERON:0002950,2.93e-07,4;UBERON:0001891,2.93e-07,4;UBERON:0009616,2.93e-07,4;UBERON:0010286,2.93e-07,4;UBERON:0002420,7.60e-07,8;UBERON:0007245,7.60e-07,8;UBERON:0010009,7.60e-07,8;UBERON:0010011,7.60e-07,8;UBERON:0000454,7.60e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4652075062614,3.29529274101708,2.91644848611425,2.65974201088189,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,7.78960287347852,8.4528027170742,0.829516898467821,0.540023753326763,0.630974884054146,6.85562362569129,2.87129103237098,1.10241719293459,1.43768206527355,1.83843757322004,3.30347642998166,4.46905683298157,4.91540906419979,1.05509030184155,0.731901148819277,0.52091337055676,2.51264699101243,2.8138130501584,4.12555268997387,2.94628585473668,4.6982654663704,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,6.44099749440738,5.49000723382352,1.63350657746724,6.95297280769106,4.09144731728529,7.06479351502504,3.89379031362618,0,0,0,0.420883711772948,2.34216797332867,1.37941262660084,0.900310649026746,1.35634336052144,2.10913147369116,1.0249097622788,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,4.33683240391152,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,4.14292712856459,5.15605962095457,6.18671456437275,4.11049511862385,9.06472676867641,5.40018000185445,8.10578165803597,4.53142408984205,5.69536342927002,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.516919220600519,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr15:30387606..30387623,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=612 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:30387606..30387623,+ | |||
|description=CAGE_peak_at_chr15:30387606..30387623,+ | |||
|id=chr15:30387606..30387623,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.39e-19!23;CL:0000337!6.39e-19!23;CL:0002319!5.88e-16!43;CL:0000221!2.32e-15!44;CL:0000133!2.32e-15!44;CL:0000055!2.61e-12!50;CL:0000540!6.71e-11!33;CL:0000047!6.71e-11!33;CL:0000031!6.71e-11!33;CL:0000404!6.71e-11!33;CL:0000393!3.66e-08!39;CL:0000211!3.66e-08!39;CL:0002453!5.50e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-15,43;CL:0000221,7.91e-15,44;CL:0000133,7.91e-15,44;CL:0000117,1.36e-14,23;CL:0000337,1.36e-14,23;CL:0002453,1.27e-10,8;CL:0000540,5.21e-09,33;CL:0000047,5.21e-09,33;CL:0000031,5.21e-09,33;CL:0000404,5.21e-09,33;CL:0000333,3.00e-08,10;CL:0000095,3.00e-08,10;CL:0000243,3.00e-08,10;CL:0000123,3.00e-08,10;CL:0000125,3.00e-08,10;CL:0000030,3.00e-08,10;CL:0000339,3.00e-08,10;CL:0002321,3.24e-07,70;CL:0000128,3.91e-07,6;CL:0000126,3.91e-07,6;CL:0000127,3.91e-07,6;CL:0000393,4.56e-07,39;CL:0000211,4.56e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.37e-40!73;UBERON:0005743!8.37e-40!73;UBERON:0000073!1.87e-39!75;UBERON:0001016!1.87e-39!75;UBERON:0000033!3.77e-39!63;UBERON:0001049!1.15e-37!52;UBERON:0005068!1.15e-37!52;UBERON:0006241!1.15e-37!52;UBERON:0007135!1.15e-37!52;UBERON:0002346!6.15e-36!71;UBERON:0003075!6.15e-36!71;UBERON:0007284!6.15e-36!71;UBERON:0000955!7.71e-36!50;UBERON:0006238!7.71e-36!50;UBERON:0004121!6.03e-35!102;UBERON:0000924!6.03e-35!102;UBERON:0006601!6.03e-35!102;UBERON:0002616!9.65e-35!49;UBERON:0003056!3.48e-34!49;UBERON:0002020!1.71e-31!34;UBERON:0003080!2.29e-27!40;UBERON:0002791!9.14e-27!29;UBERON:0003528!9.14e-27!29;UBERON:0001893!9.14e-27!29;UBERON:0002780!3.22e-26!39;UBERON:0001890!3.22e-26!39;UBERON:0006240!3.22e-26!39;UBERON:0007811!9.48e-24!86;UBERON:0000956!2.57e-20!21;UBERON:0001869!2.57e-20!21;UBERON:0000203!2.57e-20!21;UBERON:0000153!3.28e-20!94;UBERON:0002619!2.14e-17!17;UBERON:0002021!6.68e-12!10;UBERON:0000411!6.68e-12!10;UBERON:0001950!6.68e-12!10;UBERON:0003076!2.58e-10!12;UBERON:0003057!2.58e-10!12;UBERON:0000025!9.07e-09!114;UBERON:0002420!1.58e-07!8;UBERON:0007245!1.58e-07!8;UBERON:0010009!1.58e-07!8;UBERON:0010011!1.58e-07!8;UBERON:0000454!1.58e-07!8;UBERON:0004111!2.51e-07!122;UBERON:0000970!2.68e-07!9;UBERON:0000019!2.68e-07!9;UBERON:0000047!2.68e-07!9;UBERON:0004088!2.68e-07!9;UBERON:0002104!2.68e-07!9;UBERON:0001456!2.68e-07!9;UBERON:0003072!2.68e-07!9;UBERON:0003071!2.68e-07!9;UBERON:0004128!2.68e-07!9;UBERON:0001954!5.59e-07!7;UBERON:0003022!5.59e-07!7;UBERON:0002421!5.59e-07!7;UBERON:0000349!5.59e-07!7;UBERON:0002600!5.59e-07!7;UBERON:0002298!5.65e-07!6;UBERON:0002240!8.32e-07!6;UBERON:0005174!8.32e-07!6;UBERON:0001137!8.32e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-43,73;UBERON:0001016,3.12e-42,75;UBERON:0000073,1.21e-40,54;UBERON:0004121,2.50e-39,95;UBERON:0000924,2.50e-39,95;UBERON:0006601,2.50e-39,95;UBERON:0002346,3.88e-38,64;UBERON:0003075,3.88e-38,64;UBERON:0007284,3.88e-38,64;UBERON:0001049,1.25e-37,52;UBERON:0005068,1.25e-37,52;UBERON:0006241,1.25e-37,52;UBERON:0007135,1.25e-37,52;UBERON:0000955,2.05e-32,47;UBERON:0006238,2.05e-32,47;UBERON:0002020,2.44e-32,34;UBERON:0010371,3.63e-32,73;UBERON:0002616,6.70e-31,46;UBERON:0003528,2.20e-27,29;UBERON:0002791,2.20e-27,29;UBERON:0001893,2.20e-27,29;UBERON:0003056,3.47e-27,49;UBERON:0003080,1.85e-24,40;UBERON:0002619,2.60e-24,17;UBERON:0010314,2.12e-23,92;UBERON:0002780,6.50e-23,39;UBERON:0001890,6.50e-23,39;UBERON:0006240,6.50e-23,39;UBERON:0000956,1.00e-21,21;UBERON:0001869,1.00e-21,21;UBERON:0000203,1.00e-21,21;UBERON:0002021,3.42e-18,10;UBERON:0000411,3.42e-18,10;UBERON:0001950,3.42e-18,10;UBERON:0003076,1.29e-13,12;UBERON:0003057,1.29e-13,12;UBERON:0000025,4.69e-12,114;UBERON:0004111,1.14e-10,122;UBERON:0011216,1.47e-09,194;UBERON:0001954,6.49e-08,7;UBERON:0003022,6.49e-08,7;UBERON:0002421,6.49e-08,7;UBERON:0000349,6.49e-08,7;UBERON:0002600,6.49e-08,7;UBERON:0000483,1.27e-07,174;UBERON:0004733,1.40e-07,6;UBERON:0004732,1.40e-07,6;UBERON:0002028,1.40e-07,6;UBERON:0007277,1.40e-07,6;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0000119,2.01e-07,176;UBERON:0002950,2.93e-07,4;UBERON:0001891,2.93e-07,4;UBERON:0009616,2.93e-07,4;UBERON:0010286,2.93e-07,4;UBERON:0002420,7.60e-07,8;UBERON:0007245,7.60e-07,8;UBERON:0010009,7.60e-07,8;UBERON:0010011,7.60e-07,8;UBERON:0000454,7.60e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4652075062614,3.29529274101708,2.91644848611425,2.65974201088189,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,7.78960287347852,8.4528027170742,0.829516898467821,0.540023753326763,0.630974884054146,6.85562362569129,2.87129103237098,1.10241719293459,1.43768206527355,1.83843757322004,3.30347642998166,4.46905683298157,4.91540906419979,1.05509030184155,0.731901148819277,0.52091337055676,2.51264699101243,2.8138130501584,4.12555268997387,2.94628585473668,4.6982654663704,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,6.44099749440738,5.49000723382352,1.63350657746724,6.95297280769106,4.09144731728529,7.06479351502504,3.89379031362618,0,0,0,0.420883711772948,2.34216797332867,1.37941262660084,0.900310649026746,1.35634336052144,2.10913147369116,1.0249097622788,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,4.33683240391152,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,4.14292712856459,5.15605962095457,6.18671456437275,4.11049511862385,9.06472676867641,5.40018000185445,8.10578165803597,4.53142408984205,5.69536342927002,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.516919220600519,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr15:30387606..30387623,+ | |||
}} |
Latest revision as of 03:54, 5 August 2015
Short description: | p@chr15:30387606..30387623, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:30387606..30387623, + |
Coexpression cluster: | MCL_coexpression_mm9:612 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.59e-15 | 43 |
ectodermal cell | 7.91e-15 | 44 |
neurectodermal cell | 7.91e-15 | 44 |
CNS neuron (sensu Vertebrata) | 1.36e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-14 | 23 |
oligodendrocyte precursor cell | 1.27e-10 | 8 |
neuron | 5.21e-09 | 33 |
neuronal stem cell | 5.21e-09 | 33 |
neuroblast | 5.21e-09 | 33 |
electrically signaling cell | 5.21e-09 | 33 |
migratory neural crest cell | 3.00e-08 | 10 |
neuron associated cell | 3.00e-08 | 10 |
glial cell (sensu Vertebrata) | 3.00e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.00e-08 | 10 |
glial cell | 3.00e-08 | 10 |
glioblast | 3.00e-08 | 10 |
glioblast (sensu Vertebrata) | 3.00e-08 | 10 |
embryonic cell | 3.24e-07 | 70 |
oligodendrocyte | 3.91e-07 | 6 |
macroglial cell | 3.91e-07 | 6 |
astrocyte | 3.91e-07 | 6 |
electrically responsive cell | 4.56e-07 | 39 |
electrically active cell | 4.56e-07 | 39 |