FFCP PHASE1:Hg19::chr4:185772476..185772488,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-212bp_to_NR_037510_5end | |||
|cluster_id=chr4:185772476..185772488,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_MIR3945_5end | |||
|id=chr4:185772476..185772488,- | |||
|ontology_enrichment_celltype=CL:0002057!7.51e-91!42;CL:0000860!4.23e-84!45;CL:0000766!2.92e-73!76;CL:0002194!2.09e-59!63;CL:0000576!2.09e-59!63;CL:0000040!2.09e-59!63;CL:0000559!2.09e-59!63;CL:0002009!2.75e-57!65;CL:0000839!1.65e-52!70;CL:0000557!1.24e-51!71;CL:0000763!4.73e-46!112;CL:0000049!4.73e-46!112;CL:0000738!5.90e-46!140;CL:0002087!1.03e-37!119;CL:0000988!1.41e-35!182;CL:0000037!4.80e-35!172;CL:0000566!4.80e-35!172;CL:0002032!5.06e-32!165;CL:0000837!5.06e-32!165;CL:0002031!3.22e-30!124;CL:0000094!1.19e-23!8;CL:0000081!8.69e-17!11;CL:0000080!8.04e-12!6;CL:0002393!5.21e-11!9;CL:0002397!5.21e-11!9;CL:0000134!5.73e-11!358;CL:0002320!1.61e-10!365;CL:0000775!3.11e-10!3;CL:0000842!2.36e-09!3;CL:0000767!2.43e-09!3;CL:0000219!6.03e-09!390;CL:0000771!1.67e-07!2;CL:0000224!4.13e-07!4;CL:0000048!4.36e-07!430;CL:0000034!5.12e-07!444;CL:0000723!7.95e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-79;33!CL:0002057;1.32e-79;33!CL:0000473;5.68e-61;39!CL:0000234;5.68e-61;39!CL:0000576;1.49e-45;48!CL:0000766;1.44e-35;69!CL:0000763;2.28e-18;100!CL:0000094;4.51e-18;8!CL:0000775;5.99e-18;3!CL:0002087;5.63e-14;104!CL:0000081;4.33e-13;11!CL:0000771;7.77e-13;2!CL:0000738;8.37e-11;136!CL:0002393;5.64e-09;6!CL:0002397;5.64e-09;6!CL:0000226;3.07e-08;3!CL:0000842;3.07e-08;3!CL:0000988;3.88e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.72e-88,42;CL:0002057,5.72e-88,42;CL:0000473,2.44e-82,48;CL:0000234,2.44e-82,48;CL:0000766,2.27e-75,72;CL:0002194,8.21e-65,59;CL:0000576,8.21e-65,59;CL:0000040,8.21e-65,59;CL:0000559,8.21e-65,59;CL:0002009,1.50e-62,61;CL:0000839,1.75e-57,66;CL:0000557,1.47e-56,67;CL:0000763,1.39e-48,108;CL:0000049,1.39e-48,108;CL:0000738,8.08e-43,136;CL:0002087,3.79e-36,115;CL:0000037,1.37e-33,168;CL:0000988,1.37e-31,177;CL:0002032,8.93e-31,161;CL:0000837,8.93e-31,161;CL:0002031,2.02e-29,120;CL:0000094,3.98e-18,8;CL:0000775,5.04e-18,3;CL:0000081,3.96e-13,11;CL:0000771,7.54e-13,2;CL:0000134,8.63e-13,354;CL:0002320,2.02e-12,361;CL:0000219,4.01e-11,386;CL:0000048,1.57e-09,427;CL:0000723,2.61e-09,433;CL:0000034,5.02e-09,441;CL:0000226,2.85e-08,3;CL:0000842,2.85e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-63;42!CL:0000049;1.19e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.68e-56!102;UBERON:0003061!5.68e-56!102;UBERON:0002193!6.41e-50!112;UBERON:0002371!9.92e-45!80;UBERON:0001474!6.35e-41!86;UBERON:0004765!2.24e-33!101;UBERON:0001434!2.24e-33!101;UBERON:0002405!8.87e-30!115;UBERON:0003081!3.22e-21!216;UBERON:0002204!2.10e-17!167;UBERON:0000178!3.46e-17!15;UBERON:0000179!3.46e-17!15;UBERON:0000463!3.46e-17!15;UBERON:0002384!1.48e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-49,76;UBERON:0002390,1.43e-46,98;UBERON:0003061,1.43e-46,98;UBERON:0001474,2.27e-45,82;UBERON:0002193,8.87e-42,108;UBERON:0004765,6.59e-41,90;UBERON:0002405,1.98e-39,93;UBERON:0001434,2.54e-36,100;UBERON:0002204,1.17e-19,167;UBERON:0003081,1.23e-19,203;UBERON:0002384,6.42e-12,371;UBERON:0000926,1.39e-10,315;UBERON:0004120,1.39e-10,315;UBERON:0006603,1.39e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0,0,0,3.87796785972314,4.61252229181326,2.60413044859022,0,0,0,0.290796477559129,0,0,1.62700325833979,1.23350366406548,0.309706370895104,17.5492359316512,11.7833925003386,12.2970759542064,8.27389633767885,5.16387746867061,9.47985406160392,0.752969358170419,0.272906150057846,0.674170453335254,10.4068523406107,7.70229664982625,9.59005688698562,2.63881040149373,7.18069167437875,2.98357325372886,8.12585868160035,7.37600792098482,5.60540024096017,6.78371396193207,12.5155900420848,8.90474263290978,6.65939452896706,8.47038562771399,6.0127853613768,0.211255286311942,0.212604299965044,0.209658645508376,0.673971786878971,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99205619157746,2.99161459204025,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.80428461064202,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,2.27858874869665,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MIR3945 | |||
}} |
Latest revision as of 02:24, 17 September 2015
Short description: | p3@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR3945_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -212bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.53e-49 | 76 |
hematopoietic system | 1.43e-46 | 98 |
blood island | 1.43e-46 | 98 |
bone element | 2.27e-45 | 82 |
hemolymphoid system | 8.87e-42 | 108 |
skeletal element | 6.59e-41 | 90 |
immune system | 1.98e-39 | 93 |
skeletal system | 2.54e-36 | 100 |
musculoskeletal system | 1.17e-19 | 167 |
lateral plate mesoderm | 1.23e-19 | 203 |
connective tissue | 6.42e-12 | 371 |
mesoderm | 1.39e-10 | 315 |
mesoderm-derived structure | 1.39e-10 | 315 |
presumptive mesoderm | 1.39e-10 | 315 |